CX309046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_LEIBR (Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis GN=LbrM01_V2.0740 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.706e-19 Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 273 G+ R+LV TDLV RGID+ VNIVIN+D+P + + YLHR+GR GR+G KG+AI FV+ D ++L++++ + I ELP +D + Y+ Sbjct: 316 GSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE-KDVELLHEIEGHYHTQIDELP--VDFAAYL 401
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.800e-19 Identity = 38/80 (47.50%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 246 G+ R+L+ TDL+ RGID+++V++VINYD+P S + Y+HR+GR GRFG KG+AI FVS+ D ++L +++ + ++E+P Sbjct: 316 GSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSN-EDKNMLEEIETYYNTQVEEMP 394
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.481e-19 Identity = 41/83 (49.40%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG++I FV+S D +L+ +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTS-DDERMLSDIQRFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19 Identity = 38/83 (45.78%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TD++ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+ +D+ L ++++ + I+E+PE I Sbjct: 317 GSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTE-NDARQLKEIESYYTTQIEEMPESI 398
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19 Identity = 41/83 (49.40%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV+ D +L+ +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTK-DDERMLSDIQKFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.444e-18 Identity = 41/83 (49.40%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV++ D +L +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTT-DDERMLFDIQKFYNVIIEELPSNV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.886e-18 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + D I+ VQ + V ++ELP + Sbjct: 325 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERIVFDVQRFYNVTVEELPANV 406
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.886e-18 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV D +L+ +Q + V I+ELP + Sbjct: 328 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVIK-DDERMLSDIQRFYNVVIEELPANV 409
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.886e-18 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + D +L +Q + V I+ELP + Sbjct: 329 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQRFYNVTIEELPANV 410
BLAST of CX309046 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.463e-18 Identity = 39/83 (46.99%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 7 GNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 255 G+ RIL+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I Sbjct: 311 GSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTE-RDVGMMREIEQFYSTQIEEMPADI 392 The following BLAST results are available for this feature:
BLAST of CX309046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 482
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309046 ID=CX309046; Name=CX309046; organism=Citrus clementina; type=EST; length=485bpback to top |