CX309065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.896e-15 Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ FT+L LF KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF12_CAEBR (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae GN=arf-1.2 PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.896e-15 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG +F LF LFG KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGNVFGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4) HSP 1 Score: 79.7221 bits (195), Expect = 5.089e-15 Identity = 36/54 (66.67%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ ++LF+SL G +E RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLTISKLFASLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 40/55 (72.73%), Postives = 47/55 (85.45%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFG-NKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG +F+ +F L+G NKE RIL+LGLD AGKTTILYRLQ+GEVV+T PTIGFNVE Sbjct: 1 MGNIFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE 55
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ ++L + LFG KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLSVSKLLNGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ + LFS +FG K+ RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ + LFS +FG K+ RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG+ + LFS +FG K+ RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 8.680e-15 Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG +F LF LFG +E RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGNVFGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54
BLAST of CX309065 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 215 MGIMFTRLFSSLFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVE 376 MG + T L LFG KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVE Sbjct: 1 MGNLVTHLLDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 54 The following BLAST results are available for this feature:
BLAST of CX309065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309065 ID=CX309065; Name=CX309065; organism=Citrus clementina; type=EST; length=378bpback to top |