CX309069

Overview
NameCX309069
Unique NameCX309069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length394
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ASPFC (Eukaryotic translation initiation factor 3 subunit L OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_026190 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.003e-23
Identity = 53/129 (41.09%), Postives = 85/129 (65.89%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE+++R+Q    +A  +++ELF  ACPKFI+P+ P F+ P +N   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLLRLQHGGPDALPLFEELFRSACPKFISPTPPDFDNPALNI--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_EMENI (Eukaryotic translation initiation factor 3 subunit L OS=Emericella nidulans GN=AN5954 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.310e-23
Identity = 54/129 (41.86%), Postives = 85/129 (65.89%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+QMYAL+AIC++L P    +++T++S LREKYGE++ R+Q+   EA  +++ELF  ACPKFI+P+ P F+ P +N   D       +F+ EVK       +RS+LK+Y++
Sbjct:  271 RTKNFQKGGNSYDAIAKKNDQMYALIAICVALHP--TRLDDTIHSALREKYGEQLHRLQQGGPEALPLFEELFRSACPKFISPTPPDFDNPALNV--DPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTT 395          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_MAGGR (Eukaryotic translation initiation factor 3 subunit L OS=Magnaporthe grisea GN=MGG_05266 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.449e-22
Identity = 52/129 (40.31%), Postives = 86/129 (66.67%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + QK+ QY+ I KKN+QM AL+AIC++  P    +++T+++ LREK+G++++++QR   E+  +Y+ELF  ACPKFI+P  P F+ P    N D     L +F+ EVK       V+S+L++Y++
Sbjct:  266 RTKNF-QKNAQYDSITKKNDQMLALIAICVAFHP--TRLDDTIHTALREKFGDQLLKLQRGGPESLPVYEELFRTACPKFISPVPPDFDNP--EANVDPIEHHLSVFMDEVKTNMWSPTVKSYLRLYTT 389          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_COCIM (Eukaryotic translation initiation factor 3 subunit L OS=Coccidioides immitis GN=CIMG_04353 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.216e-22
Identity = 52/129 (40.31%), Postives = 83/129 (64.34%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + +    Y+ I KKN+Q+ AL+AIC+S  P    +++T++S LREKYG++ IR+QR   +A  +Y+ELF  ACPKFI+P+ P F+ P +N   D       +F+ EV+       V+S+LK+Y++
Sbjct:  276 RTKNFQKGRESYDAIAKKNDQILALIAICVSFHP--TRLDDTIHSGLREKYGDQFIRLQRGGPDALPLYEELFRSACPKFISPTPPDFDNPALNI--DPVDHHTAVFMDEVRNTLYNPTVKSYLKLYTT 400          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_CHAGB (Eukaryotic translation initiation factor 3 subunit L OS=Chaetomium globosum GN=CHGG_03070 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.506e-22
Identity = 50/129 (38.76%), Postives = 87/129 (67.44%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TK + QK+ QY+ I KKN+QM AL+AIC++  P    +++T+++ LREKYG++++++QR   ++  +++ELF  ACPKF++P  P F++P  N   D     L +F+ EVK       V+S+L++Y++
Sbjct:  269 RTKNF-QKNTQYDSITKKNDQMLALIAICVAFHP--TRLDDTIHTALREKYGDQLLKLQRGGPDSLPVFEELFKSACPKFMSPIPPDFDKPEANI--DPIDHHLSVFMEEVKTNMWSPTVKSYLRLYTT 392          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_ANOGA (Eukaryotic translation initiation factor 3 subunit L OS=Anopheles gambiae GN=AGAP006130 PE=3 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.313e-20
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ +QMY LLAICL L P  + ++E++   LREK Y + M +MQ  D     ++   F +ACPKF++P  P  + P+ +Y +DA   Q+ +F+ EVKQQQ L  +RS+LK+Y++
Sbjct:  312 RTKQLYSARSYQNDQINKQTDQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDNMYKMQCGD---LDVFRNFFVFACPKFVSPVPPPPDAPIEDYVKDALEHQINVFMDEVKQQQELPTIRSYLKLYTT 437          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROPS (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila pseudoobscura pseudoobscura GN=GA19025 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19
Identity = 56/131 (42.75%), Postives = 86/131 (65.65%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL++F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  318 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTT 443          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROPE (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila persimilis GN=GL25016 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19
Identity = 56/131 (42.75%), Postives = 86/131 (65.65%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL++F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  318 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTT 443          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROME (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila melanogaster GN=CG5642 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19
Identity = 56/131 (42.75%), Postives = 86/131 (65.65%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL++F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_AEDAE (Eukaryotic translation initiation factor 3 subunit L OS=Aedes aegypti GN=AAEL009617 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.499e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ +QMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACPKF++P  P  + P+ +Y ++A   Q  +F+ EV+QQQ L  +RS+LK+Y++
Sbjct:  311 RTKQLYSARSYQNDQINKQTDQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDNMYKMQCGDLETFRNF---FVFACPKFVSPVPPPSDAPIDDYVKEALEHQTNVFMDEVRQQQELPTIRSYLKLYTT 436          
The following BLAST results are available for this feature:
BLAST of CX309069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
EIF3L_ASPFC1.003e-2341.09Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_EMENI1.310e-2341.86Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_MAGGR1.449e-2240.31Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_COCIM4.216e-2240.31Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_CHAGB5.506e-2238.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_ANOGA2.313e-2042.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROPS1.148e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROPE1.148e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROME1.148e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_AEDAE1.499e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC21008B05Rv AbsLeaSub1 Citrus clementina cDNA clone C21008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309069 ID=CX309069; Name=CX309069; organism=Citrus clementina; type=EST; length=394bp
AGTGATGAATACACTTTCAAGAAAGATCGGACTCCTGATAATAATTGTTG
CTGCTTCACCTCATAAAGGAAAAGCTTCAACTGGAGTCTATAGGCATCCT
GGTTGTAATTTACAAGAGGCTCCTCAAAGCTCGGAGCAGAGGGAGTAATG
AACTTAGGACATGCATACGAGAAGAGCTCATCATAGATAGAAAATGCTTC
ATCATCATATCTTTGCATCCGAATCATCTTCTCCCCATATTTCTCCCGTA
GTTGCGAGTTCACAGTCTCCTCAACATGCTTCACTTAGGGACAAAGAGAA
AGACAAATTGCCAGCAAGGCATACATCTGCTCATTCTTCTTTAGTATCTG
CTCATACTGTGGAGATTTCTGATGGTATTGCTTGGTCTTGTATA
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