CX309069

Overview
NameCX309069
Unique NameCX309069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length394
Libraries
Library NameType
AbsLeaSub1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_CULQU (Eukaryotic translation initiation factor 3 subunit L OS=Culex quinquefasciatus GN=CPIJ009242 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ +QMY LLAICL L P  + ++E++   LREK Y + M +MQ  D + F  +   F +ACPKF++P  P  + PL +Y ++A   Q  +F+ EV+QQQ L  +RS+LK+Y++
Sbjct:  310 RTKQLYSARSYQNDQINKQTDQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDNMYKMQCGDLDTFRNF---FVFACPKFVSPVPPPSDAPLDDYVKEALEHQTNVFMDEVRQQQELPTIRSYLKLYTT 435          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROYA (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila yakuba GN=GE20146 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROVI (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila virilis GN=GJ13043 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  315 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 440          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROSI (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila simulans GN=GD12745 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROSE (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila sechellia GN=GM24677 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROMO (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila mojavensis GN=GI12903 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  315 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 440          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROER (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila erecta GN=GG13851 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROGR (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila grimshawi GN=GH15308 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.340e-19
Identity = 57/131 (43.51%), Postives = 84/131 (64.12%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D E F  +   F +ACP+F++P  P  + PL +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  317 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSF---FVFACPRFVSPCPPVADAPLEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTT 442          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DROAN (Eukaryotic translation initiation factor 3 subunit L OS=Drosophila ananassae GN=GF25000 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.362e-19
Identity = 55/131 (41.98%), Postives = 85/131 (64.89%), Query Frame = -3
Query:    3 KTKQ-YHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREK-YGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            +TKQ Y  +S Q +QI K+ EQMY LLAICL L P  + ++E++   LREK Y + M +MQ  D + F  +   F +ACP+F++P  P+ + P+ +Y +D    QL +F+ EV+QQ+ L   RS+LK+Y++
Sbjct:  316 RTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHP--QCIDESIQQVLREKNYHDAMFKMQCGDLDVFKSF---FVFACPRFVSPCPPAADAPMEDYVKDPMEHQLMVFMDEVRQQKDLPTTRSYLKLYTT 441          
BLAST of CX309069 vs. ExPASy Swiss-Prot
Match: EIF3L_DICDI (Eukaryotic translation initiation factor 3 subunit L OS=Dictyostelium discoideum GN=eif3l PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.362e-19
Identity = 54/129 (41.86%), Postives = 84/129 (65.12%), Query Frame = -3
Query:    3 KTKQYHQKSPQYEQILKKNEQMYALLAICLSLCP*VKHVEETVNSQLREKYGEKMIRMQRYDDEAFSIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKVYSS 389
            K+K  + +S   E   KK ++MYALL IC +L P    ++E V++ L+EK+G+K++R+Q+ D    S+Y+EL+++A P+ I P  P      V    D +RLQL LFL EVKQQ LL+ +RS++ +YS+
Sbjct:  406 KSKSQNFQSDHNE---KKTDKMYALLTICQALYP--NKIDENVSNNLKEKFGDKLLRLQKGD---LSVYEELYTFAAPRCIGPVPPYISGFNVTA-LDPHRLQLSLFLEEVKQQSLLTTIRSYITLYST 525          
The following BLAST results are available for this feature:
BLAST of CX309069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
EIF3L_CULQU1.958e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROYA2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROVI2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROSI2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROSE2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROMO2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROER2.557e-1942.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROGR3.340e-1943.51Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DROAN4.362e-1941.98Eukaryotic translation initiation factor 3 subunit... [more]
EIF3L_DICDI4.362e-1941.86Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC21008B05Rv AbsLeaSub1 Citrus clementina cDNA clone C21008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX309069 ID=CX309069; Name=CX309069; organism=Citrus clementina; type=EST; length=394bp
AGTGATGAATACACTTTCAAGAAAGATCGGACTCCTGATAATAATTGTTG
CTGCTTCACCTCATAAAGGAAAAGCTTCAACTGGAGTCTATAGGCATCCT
GGTTGTAATTTACAAGAGGCTCCTCAAAGCTCGGAGCAGAGGGAGTAATG
AACTTAGGACATGCATACGAGAAGAGCTCATCATAGATAGAAAATGCTTC
ATCATCATATCTTTGCATCCGAATCATCTTCTCCCCATATTTCTCCCGTA
GTTGCGAGTTCACAGTCTCCTCAACATGCTTCACTTAGGGACAAAGAGAA
AGACAAATTGCCAGCAAGGCATACATCTGCTCATTCTTCTTTAGTATCTG
CTCATACTGTGGAGATTTCTGATGGTATTGCTTGGTCTTGTATA
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