CX309072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.729e-46 Identity = 99/207 (47.83%), Postives = 130/207 (62.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN Y+ +L GDRIMGLD P GGHLSHGY T K+S S +F++ PY++N +TG IDY+ LE+ A +RPK+++ G S+Y R DY R RQ++ + GA L+ DMAHISGL++A SPF Y DIVT+TTHKSL +K +G + Y+ E +INF V P QGGPHN+ I+ALA+ALKQ P Sbjct: 136 ANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTKT-TKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQLSIRLGAYLLSDMAHISGLVSAVVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTTKGKEI-------PYELERKINFLVFPGHQGGPHNHTISALAVALKQCTEP 334
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 3.490e-44 Identity = 99/206 (48.06%), Postives = 127/206 (61.65%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFA+YT ++ PG RIMGLD PSGGHL+HGY T +K+SA+S++F+S PY V G IDYE LE+ D+ P ILICG S+Y R+ DY R + IA + GA L D++HIS L+A+ + SPF++CDIV +TT K L + K G D + RINFAV P LQGGPHN+ IA +A AL TP Sbjct: 111 ANFAIYTAVVPPGGRIMGLDLPSGGHLTHGYKTKT-RKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGYSAYSRDIDYKRLQSIAGRNGAFLFADISHISPLVASGLMNSPFEHCDIVMTTTQKGL--RGPRGALIFYRRAVTKNG---------ETVDLDARINFAVFPMLQGGPHNHTIAGIASALLHAGTP 303
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39 Identity = 89/205 (43.41%), Postives = 125/205 (60.98%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AVY L PGD I+G+ P GGHL+HG KVS + +F + Y +N + G +DYE++ KA++ +PKILI G S+YPR D+ +FR+IAD+ GA+LM DMAH +GL+A SPF Y D+VT+TTHKSL + PR I ++ + I+ AV P +QGGPH++ AA+A+ALK+ +T Sbjct: 106 ANMAVYLAFLKPGDTILGMALPHGGHLTHG------SKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKILIAGHSAYPRILDFAKFREIADEVGALLMVDMAHFAGLVAGGVHPSPFPYADVVTTTTHKSL-------------RGPRGAMI-------MCKAEYAKAIDKAVFPGMQGGPHDSTTAAIAVALKEAST 283
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.088e-37 Identity = 88/206 (42.72%), Postives = 127/206 (61.65%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL P D+I+G+D GGHL+HG KV+A+ ++SF Y VN + G+IDY+++ + A +PK+++CG S+YPR D+ +FR+IAD+ GA+LM D+AHI+GL+AA E SPF YCD+VT+TTHK+L + PR I N + D ++IN A+ P +QGGP + IAA A+ + P Sbjct: 97 ANQGVYLALLKPYDKILGMDLSHGGHLTHG------AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVCGASAYPRVIDFKKFREIADEVGALLMADIAHIAGLVAAGEHPSPFPYCDVVTTTTHKTL-------------RGPRGGMIMTN------DADIAKKINSAIFPGIQGGPLVHVIAAKAVGFGENLKP 276
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_SYNY3 (Serine hydroxymethyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37 Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +FE Y V +TG +DY+K+ ++A++ +PK+LICG S+YPR+ ++ +FR IAD+ GA LM D+AHI+GL+A+ SP YCD+VT+TTHK+L + PR I N N + ++ + +V P QGGP + I A A+A + P Sbjct: 102 ANFAVFLTLLQPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFEVAHYGVEKETGRLDYDKIRQQALEVKPKLLICGYSAYPRQIEFDKFRAIADEVGAYLMADIAHIAGLVASGHHPSPLPYCDVVTTTTHKTL-------------RGPRGGLIMTN------NEELGKKFDKSVFPGTQGGPLEHVITAKAVAFGEALKP 282
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA2_RHILO (Serine hydroxymethyltransferase 2 OS=Rhizobium loti GN=glyA2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37 Identity = 88/206 (42.72%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D++MGL P GGHL+HG+ V+ + ++ PY ++ +T IDY++L E A RPK++ GG+SYPR +DY +IA + + L+ D+AHISGLI A +P +CD+VTST+HKS+ K + L H S ++ +RI+ AV P LQGGPH N IAALA+AL++ ATP Sbjct: 105 ANQAVYRALLSPRDKVMGLPLPEGGHLTHGW------SVNFSGTDYQRVPYGLHDKTQQIDYDRLRETARRERPKLIWVGGTSYPRVFDYAAMAEIALEANSYLVADIAHISGLIVAGAHPNPVVHCDVVTSTSHKSI----RGPRGGFILSKNEDRYQALYH--STSKHNLAKRIDRAVFPQLQGGPHMNTIAALAVALQEAATP 298
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.049e-37 Identity = 89/212 (41.98%), Postives = 121/212 (57.08%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ +L PGD+ MGL+ GGHLSHG V+ + I + Y +N +TG +DY+++EE A+ +PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I + + ++ AV P +QGGP + IAA A+A ++ P Sbjct: 93 ANAAVFLAVLNPGDKFMGLNLAHGGHLSHG------SLVNTSGIIYTPCEYNLNQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKM----------MSQLLDSAVFPGVQGGPLEHVIAAKAVAFGEILQP 288
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS9 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9902) GN=glyA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.207e-37 Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMGLD GGHL+HG V+ + +F Y V+P T +D E + + A++++PK+++CG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + +F ++ + AV P QGGP + IAA A+A + P Sbjct: 106 ANFAVFLALLKPGDTIMGLDLSHGGHLTHG------SPVNVSGKWFNVVQYGVDPTTQRLDMEAIRKLALEHKPKLIVCGYSAYPRTIDFAAFRSIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDAEFAKKFDKAVFPGTQGGPLEHVIAAKAVAFGEALQP 286
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA2_RHOPA (Serine hydroxymethyltransferase 2 OS=Rhodopseudomonas palustris GN=glyA2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.202e-36 Identity = 87/206 (42.23%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+GLD +GGHL+HG V+ + +F++ Y V+P+T ID +++ +A +RP++LI GGS+YPR D+GRFRQIAD+ GA+LM DMAH +GL+A SP + D+VTSTTHK+L + PR + N + + ++IN A P LQGGP + IAA A+A + P Sbjct: 116 ANQAVFLALLAPGDTILGLDLKAGGHLTHG------APVNMSGRWFKAVSYGVDPETHRIDMDQVAVQARQHRPRLLIAGGSAYPRIIDFGRFRQIADEVGAILMVDMAHFAGLVAGGVYPSPVPFADVVTSTTHKTL-------------RGPRGGFVLTN------DANIAKKINSATFPGLQGGPLMHVIAAKAVAFGEALQP 296
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYA_SYNS3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9311) GN=glyA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.570e-36 Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD I+G+D GGHL+HG V+ + +F Y V+ +T +D E + + A++++PK++ICG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA ASP +CD+VT+TTHK+L + PR G+ L C + +F R + AV P QGGP + IAA A+A + P Sbjct: 106 ANFAVFLALLQPGDTILGMDLSHGGHLTHG------SPVNVSGKWFNVVQYGVDKETQRLDMEAIRKLALEHKPKLIICGYSAYPRSIDFAAFRSIADEVGAYLLADMAHIAGLVAAGVHASPVPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDAEFARRFDKAVFPGSQGGPLEHVIAAKAVAFGEALQP 286 The following BLAST results are available for this feature:
BLAST of CX309072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309072 ID=CX309072; Name=CX309072; organism=Citrus clementina; type=EST; length=620bpback to top |