CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RICAH (Serine hydroxymethyltransferase OS=Rickettsia akari (strain Hartford) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 86/206 (41.75%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGD I+G+ SGGHL+HG + + +F + Y VN +T IDY+++E A+ ++PK+LI G S+YPR D+ RFR+IADK GA M D+AHI+GL+A E SP Y +VTSTTHK+L + PR G+ L+ + + ++IN A+ P LQGGP + +AA A+A + P Sbjct: 101 ANQAVYLTLLQPGDTILGMSLDSGGHLTHG------ASPNMSGKWFNAVSYGVNKKTYLIDYDEIERLAVLHKPKLLIAGFSAYPRNIDFTRFREIADKVGAYFMADIAHIAGLVATGEHQSPISYAHVVTSTTHKTL-------------RGPR-GGLVLSDDE-----EIGKKINSALFPGLQGGPLMHIVAAKAVAFLESLQP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELPH (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain HPAG1) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y VN GYIDYE+ + A +P+I++CG S+YPRE D+ +FR+IAD+ GA+L+ D+AH++GL+ E A PF +C +V+STTHK+L + PR G+ L + + + +I+ A+ P QGGP + IAA A+ K+ P Sbjct: 98 ANNAVYHALLKPYDKILGMDLSCGGHLTHG------AKVSLTGKHYQSFSYGVNLD-GYIDYEEALKIAQSVKPEIIVCGFSAYPREIDFKKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTL-------------RGPR-GGLILTNDE-----EIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_DESAA (Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 83/206 (40.29%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL PGD ++G+D GGHL+HG VS + F Y V +TG IDY++L A +++PK+++ G S+YPR D+ +IA + GA LM DMAHI+GL+AA E SP Y D+VT+TTHK+L + PR G SN F ++++ + P +QGGP + IAA A+A K+ TP Sbjct: 99 ANMGVYFALLEPGDTVLGMDLSHGGHLTHG------SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLAKEHKPKLIVAGASAYPRIIDFPELEKIARETGAYLMVDMAHIAGLVAAGEHPSPLPYADVVTTTTHKTL-------------RGPR-------GGMILSNKGFGKKLSSQIFPGIQGGPLMHVIAAKAVAFKEALTP 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJJ (Serine hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALK 604 AN VY L+ PGD+I+G+D GGHL+HG KVS++ +ES Y V G IDYEK+ E A +PK+++CG S+Y R D+ +FR+IAD+ GA L D+AHI+GL+ A E SPF Y +V+STTHK+L + PR I N + +F ++IN A+ P +QGGP + IAA A+ K Sbjct: 96 ANQGVYAALINPGDKILGMDLSHGGHLTHG------AKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTL-------------RGPRGGIIMTN------DEEFAKKINSAIFPGIQGGPLMHVIAAKAVGFK 270
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BEII9 (Serine hydroxymethyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 85/206 (41.26%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD MGLD +GGHL+HG V+ + +F++ Y V ID + +E A +++PK++I GGS+YPR WD+ RFR IAD GA DMAH +GL+A SPF + +VTSTTHK+L + PR G+ L ++ D ++IN AV P LQGGP + IAA A+A + P Sbjct: 113 ANQAVFLALLQPGDVFMGLDLAAGGHLTHG------SPVNLSGKWFKAVSYGVRQSDHLIDMDAVEALAKEHKPKLIIAGGSAYPRHWDFARFRAIADSVGAYFFVDMAHFAGLVAGGAHPSPFPHAHVVTSTTHKTL-------------RGPR-GGLVLT-----NDADIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_ANASP (Serine hydroxymethyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 83/206 (40.29%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD+IMG+D GGHL+HG V+ + +F+ Y V+ QT +DY+++ E A+ RPK+LICG S+YPR D+ +FR IAD+ GA L+ D+AHI+GL+A +P YCD+VT+TTHK+L + PR G+ L + + ++++ +V P QGGP + IA A+A + P Sbjct: 102 ANFAVFLTLLKPGDKIMGMDLSHGGHLTHG------SPVNVSGKWFQVCHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYPRIIDFEKFRSIADEVGAYLLADIAHIAGLVATGLHPNPLPYCDVVTTTTHKTL-------------RGPR-GGLILTR-----DAELGKKLDKSVFPGTQGGPLEHVIAGKAVAFGEALKP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 82/206 (39.81%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A+Y LL PGD +MG+ P GGHL+HG+ VSA I+F S Y V TG ID++++ E A RPK++ GG++ PR D+ F +IA + AVL+ D+AHISGL+A SP + DI+++TTHK+L + PR + S + + ++ AV P LQGGPHN+ AA+A+AL + P Sbjct: 104 ANLAIYLALLSPGDTVMGMALPMGGHLTHGW------PVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIPRIIDFAAFAEIAREVNAVLVADIAHISGLVAGGVHPSPVGHADIISTTTHKTL-------------RGPRGAML-------MSTEQYAKALDKAVFPGLQGGPHNHTTAAIAVALLEAMQP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPK (Serine hydroxymethyltransferase 1 OS=Pseudomonas putida (strain KT2440) GN=glyA1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL GD I+G+ GGHL+HG KVS++ + + Y ++ TG IDY+++E A++++PK+++ G S+Y + D+ RFR IADK GA+L DMAH++GL+AA +P + D+VT+TTHK+L + PR G+ L SN + E+++N AV P QGGP + IAA A+ K+ P Sbjct: 101 ANGAVYLALLQAGDTILGMSLAHGGHLTHG------AKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTL-------------RGPR-GGLIL----AKSNEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RHOCS (Serine hydroxymethyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD MG+D +GGHL+HG + + +F+ Y V IDYE++E KA ++RPK++I GGS+YPR+ D+ RFR+IAD+ GA LM DMAH +GL+AA SP + +VT+TTHK+L + PR I N + + ++ N AV P LQGGP + IAA A+A + P Sbjct: 107 ANQAVFMALLQPGDTFMGMDLAAGGHLTHG------APANQSGKWFKVVSYGVRRDDHLIDYEEVEAKAREHRPKLIIAGGSAYPRQIDFARFRRIADEIGAYLMVDMAHYAGLVAAGVYPSPLPHAHVVTTTTHKTL-------------RGPRGGMILSN------DPELGKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALRP 287
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PELPD (Serine hydroxymethyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 83/206 (40.29%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PGD I+G++ GGHL+HG V+ + FF PY V+P+T IDY ++E A++++PK+++ G S+YPR D+ FR IADK GA++M DMAHI+GL+AA SP + + VT+TTHK+L + PR G F + IN + P +QGGP + IAA A+A K+ P Sbjct: 97 ANMAVYFSALKPGDTILGMNLSHGGHLTHG------SPVNFSGRFFNVVPYGVSPETQTIDYAEVERLALEHKPKMIVVGASAYPRTIDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPIPHAEFVTTTTHKTL-------------RGPR-------GGMILCQERFAKSINSQIFPGIQGGPLMHVIAAKAVAFKEALQP 276 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |