CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCH7 (Serine hydroxymethyltransferase OS=Mycoplasma hyopneumoniae (strain 7448) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD+I+GLD +GGHLSHGY K++ + +F+ Y ++ + +DYE +E+ A+ +P ++ICG S+Y R+ D+ RFRQIADK A L+ D+AHI+GLIAA + SP Y I+TSTT K+L + PR G+ L S+ + +I+ V P +QGGP + IAA A+A K+ P Sbjct: 98 ANAAVFAALLKPGDKILGLDLNAGGHLSHGY------KINFSGMFYSGISYFLD-ENELLDYEAIEKIALKTKPNLIICGYSAYSRKIDFARFRQIADKVNAFLLADIAHIAGLIAAGQHPSPVGYAHIITSTTQKTL-------------RGPR-GGLILT-----SSKEIAAKIDKVVFPGIQGGPFFHTIAAKAVAFKEALEP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCAP (Serine hydroxymethyltransferase OS=Mycoplasma agalactiae (strain PG2) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 87/206 (42.23%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A L GD+IMGLD SGGHL+HGY K+S + IF+ S Y VN + G +DYE ++E A+ +PK++ICG S+Y R D+ +FR+IAD CGA LM D+AHI+GLIA SP Y DI+TSTTHK+L + R I N + + +++N V P QGGP + IA A+A + P Sbjct: 98 ANAAALATLASQGDKIMGLDLASGGHLTHGY------KISFSGIFYNSITYSVN-EDGILDYEAIKELAIKEKPKVIICGYSAYSRIVDFKKFREIADACGAKLMADIAHIAGLIAGGVHPSPVPYADIITSTTHKTL-------------RGARGAIIMTN------DVEIAKKMNRWVFPGYQGGPLFHAIAGKAVAFGEALKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LACLM (Serine hydroxymethyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 82/206 (39.81%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L+ PGD ++G+D +GGHL+HG V+ + + PY VNPQT +DYE++ + A + +PK+++ G S+Y R D+ +FRQIAD GA LM DMAHI+GL+A +P Y D+VT+TTHK+L + PR I N + ++IN A+ P QGGP + IAA A+A K+ P Sbjct: 101 ANAAAYMALIQPGDTVLGMDLNAGGHLTHG------ASVNFSGKTYHFVPYGVNPQTELLDYEEILKIAKEVQPKLIVAGASAYSRLIDFAKFRQIADSVGAKLMVDMAHIAGLVATGAHPNPLPYADVVTTTTHKTL-------------RGPRGGMILTN------DEVLAKKINSAIFPGTQGGPLEHVIAAKAVAFKEALDP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_FINM2 (Serine hydroxymethyltransferase OS=Finegoldia magna (strain ATCC 29328) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G+ GGHL+HG V+ + F+ Y V+P+TG IDYE + E A+ ++PK+++ G S+YPR D+ +FR+IAD+ GA LM DMAHI+GL+A + SP Y D VT+TTHK+L + PR I + ++ ++ +V P QGGP + IAA A+ K+ P Sbjct: 101 ANIAVYVAVLKPGDTVLGMRLTEGGHLTHG------SPVNMSGKFYNFVDYGVDPETGTIDYENVRELALKHKPKLIVAGASAYPRIIDFKKFREIADEVGAYLMVDMAHIAGLVATGDHPSPVPYADFVTTTTHKTL-------------RGPRGGAI-------LCKEEHKKLLDKSVFPGFQGGPLEHIIAAKAVCFKEDLQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_EHRRW (Serine hydroxymethyltransferase OS=Ehrlichia ruminantium (strain Welgevonden) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 83/209 (39.71%), Postives = 118/209 (56.46%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI---FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ LL PGD ++G+ GGHL+HG SA SI +F + Y+V+ TG ID + +E+ A+ + P ++I G SSYPR D+ RFR+IADK GA L+ D+AH +GL+AA E SP +Y ++TSTTHK+L + PR I NH D ++I ++ P +QGGP + IAA A+A + P Sbjct: 103 ANQGVFAALLKPGDTVIGMSLDCGGHLTHG---------SAPSISGKWFNAVQYQVDRDTGMIDMDAIEKLALSHNPSLIIAGSSSYPRTIDFKRFREIADKVGAYLLADIAHYAGLVAAGEFPSPIEYAHVITSTTHKTL-------------RGPRGAVIMTNH------EDIYKKIQSSIFPGMQGGPLMHVIAARAVAFGEALKP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_EHRRG (Serine hydroxymethyltransferase OS=Ehrlichia ruminantium (strain Gardel) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.507e-34 Identity = 83/209 (39.71%), Postives = 118/209 (56.46%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI---FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ LL PGD ++G+ GGHL+HG SA SI +F + Y+V+ TG ID + +E+ A+ + P ++I G SSYPR D+ RFR+IADK GA L+ D+AH +GL+AA E SP +Y ++TSTTHK+L + PR I NH D ++I ++ P +QGGP + IAA A+A + P Sbjct: 103 ANQGVFAALLKPGDTVIGMSLDCGGHLTHG---------SAPSISGKWFNAVQYQVDRDTGMIDMDAIEKLALSHNPSLIIAGSSSYPRTIDFKRFREIADKVGAYLLADIAHYAGLVAAGEFPSPIEYAHVITSTTHKTL-------------RGPRGAVIMTNH------EDIYKKIQSSIFPGMQGGPLMHVIAARAVAFGEALKP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y V GYI+Y+K+EE A +P++++CG S+Y RE D+ RFR+IAD GA+L+ D+AH++GLI A E +PF +C IVT+TTHK+L + PR I N + + ++I+ AV P +QGGP + IAA A+ + P Sbjct: 98 ANVAVYNALLKPYDKILGMDLSHGGHLTHG------AKVSVTGQTYQSFFYGVELD-GYINYDKVEEIAKIVKPQMIVCGFSAYARELDFKRFREIADSVGALLLGDVAHVAGLIVAGEYPNPFPHCHIVTTTTHKTL-------------RGPRGGMILTN------DEEIAKKIDKAVFPGMQGGPLMHVIAAKAVGFGENLKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_VESOH (Serine hydroxymethyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 88/202 (43.56%), Postives = 120/202 (59.41%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN AV+ LL+PGD I+G+ GGHL+HG TP S + F S Y +N +TG IDYE++E A Y+PK++I G S+Y R D+ RFR+IAD GA LM DMAH++GLIA E SP D+ T+TTHK+L + PR G+ L SN E+++N A+ P +QGGP + IAA A++ K+ Sbjct: 101 ANAAVFQALLVPGDTILGMSLAHGGHLTHGA-TP-----SFSGKNFNSIQYGLNQKTGEIDYEQVEVLAKRYKPKMIIAGFSAYSRMVDWQRFREIADSVGAYLMVDMAHVAGLIATGEYPSPVAIADVTTTTTHKTL-------------RGPR-GGLIL----AKSNKTIEKKLNAAIFPGIQGGPLMHIIAAKAVSFKE 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THEEB (Serine hydroxymethyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F Y V+P+T +D +++ + A +RPK++ICG S+YPR + FRQIAD+ GA LM D+AHI+GL+A+ +P CD+VT+TTHK+L + PR G+ L + D ++++ AV P QGGP + IAA A+A + P Sbjct: 100 ANFAVFLALLNPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFNVVHYGVHPETERLDMDQVRDLARQHRPKLIICGYSAYPRVIPFAEFRQIADEVGAYLMADIAHIAGLVASGYHPNPVPLCDVVTTTTHKTL-------------RGPR-GGLILTRDE-----DLGKKLDKAVFPGTQGGPLEHVIAAKAVAFGEALKP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNJB (Serine hydroxymethyltransferase OS=Synechococcus sp. GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 82/206 (39.81%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F Y V+PQT ID++++ + A+ +RPK++ICG S+YPR D+ FR IAD+ GA L+ D+AHI+GL+A +P CD+VT+TTHK+L + PR G+ L + + ++++ AV P QGGP + IA A+A + P Sbjct: 97 ANFAVFLALLQPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFRVVHYGVHPQTERIDFDQVRDLALQHRPKLIICGYSAYPRAIDFAAFRTIADEVGAYLLADIAHIAGLVATGHHPNPVPLCDVVTTTTHKTL-------------RGPR-GGLILTR-----DPELGKKLDKAVFPGSQGGPLEHVIAGKAVAFGEALQP 277 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |