CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROMA (Serine hydroxymethyltransferase OS=Prochlorococcus marinus GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F + Y V+ T +++E++ + A+ RPK++ICG S+YPR D+ FR IAD+ A L+ D+AHI+GL+A +P YCD+VT+TTHK+L + PR G+ L C + +F +R + AV P QGGP + IAA A+A + P Sbjct: 101 ANFAVFLALLNPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFNAIHYGVDQTTKVLNFEQIRQVALKNRPKLIICGFSAYPRTIDFKAFRSIADEIDAYLLADIAHIAGLVACGAHPNPVPYCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDKEFGKRFDKAVFPGNQGGPLEHVIAAKAVAFGEALKP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 82/206 (39.81%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G++ GGHL+HG V+ + F PY V+ +T IDYE+ E A++++PK+++ G S+YPR D+ FR+IADK GAV+M DMAHI+GL+AA SP Y + VT+TTHK+L + PR I ++ + +N + P +QGGP + IAA A+A K+ TP Sbjct: 97 ANMAVYFSVLKPGDTVLGMNLAHGGHLTHG------SPVNFSGKLFNIVPYGVSKETQTIDYEETERLALEHKPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-------------RGPRGGMIMCRE-------EWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTP 276
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 82/206 (39.81%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD I+G++ GGHL+HG V+ + FF PY V+ +T ID+ ++E A++++PK+++ G S+YPR D+ FR IADK GAV+M DMAHI+GL+AA SP Y + VT+TTHK+L + PR G ++ + +N + P +QGGP + IAA A+ALK+ P Sbjct: 97 ANMAVYFSVLKPGDTILGMNLSHGGHLTHG------SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTL-------------RGPR-------GGMILCREEYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQP 276
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_EHRCR (Serine hydroxymethyltransferase OS=Ehrlichia chaffeensis (strain Arkansas) GN=glyA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 83/209 (39.71%), Postives = 120/209 (57.42%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI---FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ LL PGD ++G+ GGHL+HG SA SI +F + Y+V+ TG ID +++E+ A+++ P ++I G SSYPR D+ RFR+IADK GA L+ D+AH +GLIAA E SP +Y ++TSTTHK+L + PR I N+ D ++I ++ P +QGGP + IAA A+A + P Sbjct: 103 ANQGVFAALLKPGDTVIGMSLDCGGHLTHG---------SAPSISGKWFNAVQYQVDRDTGLIDMDEIEKLAVEHNPSLIIAGSSSYPRVIDFKRFREIADKVGAYLLADIAHYAGLIAAGEFPSPVEYAHVITSTTHKTL-------------RGPRGAVIMTNY------EDIHKKIQSSIFPGMQGGPLMHVIAAKAVAFAEALKP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_AGRT5 (Serine hydroxymethyltransferase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA2 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 84/206 (40.78%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGDRIMGL GGHL+HG V+ + +F+ Y+V+P+T ID EK+ EKA++ +PK+++ G S+YPR+ D+ FR+IAD+ GA LM DMAH +GLIA + + + TSTTHK+L + PR I N + D +++N AV P QGGP + IAA A+A + P Sbjct: 101 ANQAVFLALLQPGDRIMGLSLAHGGHLTHG------SPVTMSGKWFDVVSYEVDPETHLIDMEKVREKALETKPKLIVAGASAYPRQIDFAGFREIADEVGAYLMVDMAHYAGLIAGGHYPNAVPHAHVTTSTTHKTL-------------RGPRGGVILTN------DADLAKKLNSAVFPGNQGGPLMHVIAAKAVAFGEALRP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_WOLPP (Serine hydroxymethyltransferase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.277e-34 Identity = 84/206 (40.78%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+GL GGHL+HG + + +F+S Y VN T +D +++E A++++PK++I G S+YPR+ D+ RFR+IA+K GA L+ D+AH SGLIAA SP +Y I+TSTTHK+L + PR G+ + + + ++I AV P LQGGP + IAA A+A K+ P Sbjct: 108 ANQAVFASLLTPGDTILGLSLNCGGHLTHG------AAPNLSGKWFKSIQYTVNRDTYLLDMDEVERLALEHKPKLIIAGASAYPRKIDFERFREIANKVGAYLLADIAHYSGLIAAGCYPSPAEYAHIITSTTHKTL-------------RGPR-GGVVMTNDEA-----LHKKIQSAVFPGLQGGPLMHVIAAKAVAFKEALAP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.277e-34 Identity = 81/202 (40.10%), Postives = 115/202 (56.93%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN A Y LL PGD ++G+D GGHL+HG KV+ + + Y V TGYIDY+++E+ A ++PK+++ G S+YPR D+ +FR+IADK GA LM DMAHI+GL+AA +P Y D+VT+TTHK+L + PR I + + I+ A+ P QGGP + IAA A+ K+ Sbjct: 99 ANMAAYFALLKPGDTVLGMDLAHGGHLTHG------SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKLIVAGASAYPRIIDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTL-------------RGPRGGAI-------LCKQEHAKAIDKALFPGTQGGPLMHIIAAKAVCFKE 274
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RICFE (Serine hydroxymethyltransferase OS=Rickettsia felis GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.277e-34 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGD I+G+ SGGHL+HG + + +F + Y VN +T IDY+++E A ++PK+LI G S+YPR D+ RFR+IADK GA M D+AHI+GL+A E SP Y VTSTTHK+L + PR G+ L++ + + ++IN A+ P LQGGP + IAA A+A + P Sbjct: 101 ANQAVYLALLQPGDTILGMSLDSGGHLTHG------AAPNMSGKWFNAVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPRNIDFARFREIADKVGAYFMADIAHIAGLVATGEHQSPIPYTHAVTSTTHKTL-------------RGPR-GGLILSNDE-----EIGKKINSALFPGLQGGPLMHIIAAKAVAFLENLQP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PORGI (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.277e-34 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV L GD MGL+ GGHLSHG V+++ I + Y ++ +TG +DY+ +E+ A++++PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANMAVLLACLEAGDTFMGLNLEHGGHLSHG------SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGIILMGKDFDNPWGKKTPKGEIK----------KMSALLDSAVFPGVQGGPLEHVIAAKAVAFGEALDP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.277e-34 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV L GD MGL+ GGHLSHG V+++ I + Y ++ +TG +DY+ +E+ A++++PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANMAVLLACLEAGDTFMGLNLEHGGHLSHG------SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGIILMGKDFDNPWGKKTPKGEIK----------KMSALLDSAVFPGVQGGPLEHVIAAKAVAFGEALDP 288 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |