CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEAE (Serine hydroxymethyltransferase 1 OS=Pseudomonas aeruginosa GN=glyA1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.295e-34 Identity = 81/206 (39.32%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL GD I+G+ GGHL+HG KVS++ + + Y ++ TG IDY+++E A++++PK+++ G S+Y + D+ RFR IADK GA+L DMAH++GL+AA +P + D+VT+TTHK+L + PR G+ L +N + E+++N AV P QGGP + IAA A+ K+ P Sbjct: 101 ANAAVYLALLNAGDTILGMSLAHGGHLTHG------AKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTL-------------RGPR-GGLILAR----ANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_BORBR (Serine hydroxymethyltransferase 1 OS=Bordetella bronchiseptica GN=glyA1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.295e-34 Identity = 86/206 (41.75%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGDRI+GLD +GGHL+HG H V+ + +FE+ Y V+P + ID +++E A RP+++I GGS+Y R D+ RFR IAD GA+ + DMAH +GL+A SP + + T+TTHK+L + PR G+ L + D RI+ AV P LQGGP + IAA A+AL + P Sbjct: 112 ANQAVYLALLAPGDRILGLDLKAGGHLTHGAH------VNLSGKWFEALSYGVDPVSHRIDMDEVERTARRERPRLIIAGGSAYARVPDFARFRAIADATGALFVADMAHYAGLVAGGAFPSPVPFAHVTTTTTHKTL-------------RGPR-GGMILT-----DDADIARRIDAAVFPGLQGGPLMHVIAAKAVALGEALQP 292
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SULNB (Serine hydroxymethyltransferase OS=Sulfurovum sp. (strain NBC37-1) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 85/201 (42.29%), Postives = 117/201 (58.21%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALK 604 AN AVY L+ GD+I+G+D GGHL+HG K S + + SF Y V G I+Y+++ E A +PKI++CG S+Y RE D+ +FR+IAD+ GA+L D+AHI+GL+ A E SPF Y D+VT+TTHK+L PR I N + D ++IN A+ P LQGGP + IAA A+ K Sbjct: 98 ANGAVYAALIKAGDKILGMDLSHGGHLTHG------SKPSFSGKNYHSFTYGVELD-GRINYDRVMEIAKIVQPKIIVCGASAYAREIDFKKFREIADEVGAILFADIAHIAGLVCAGEHPSPFPYADVVTTTTHKTLAG-------------PRGGMIMTN------DEDIAKKINSAIFPGLQGGPLVHVIAAKAVGFK 272
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_STRGC (Serine hydroxymethyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 81/206 (39.32%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L+ PGD +MG+D +GGHL+HG VS + + Y V+P+T +D++ + ++A + +PK+++ G S+Y D+ +FR+IAD GA LM DMAHI+GL+AA SP Y DI T+TTHK+L + PR G+ L + + D ++IN A+ P +QGGP + IAA A+A K+V P Sbjct: 101 ANCAAYMALIEPGDTVMGMDLSAGGHLTHG------ASVSFSGQTYNFVSYSVDPETELLDFDAILKQAKEVQPKLIVAGASAYSHIIDFSKFREIADAVGAKLMVDMAHIAGLVAAGLHPSPVPYADITTTTTHKTL-------------RGPR-GGLILTNDE-----DLAKKINSAIFPGIQGGPLEHVIAAKAVAFKEVLDP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RHIL3 (Serine hydroxymethyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 84/205 (40.98%), Postives = 115/205 (56.10%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ KA + +PK++I GG++Y R WD+ RFR+IAD GA LM DMAHI+GL+A SPF +C + T+TTHKSL + PR G+ L + + D ++ N AV P LQGGP + IAA A+A + P Sbjct: 108 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEETKPKLIIAGGTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGVHPSPFPHCHVATTTTHKSL-------------RGPR-GGVILTNDE-----DLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQP 287
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_NOSP7 (Serine hydroxymethyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD+IMG+D GGHL+HG V+ + +F+ Y V+ QT +DY+++ E A+ RPK+LICG S+YPR D+ +FR IAD+ GA L+ D+AHI+GL+A+ P +C +VT+TTHK+L + PR G+ L S+ + ++++ +V P QGGP + IA A+A + P Sbjct: 102 ANFAVFLSLLQPGDKIMGMDLSHGGHLTHG------SPVNVSGKWFQVSHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYPRIIDFEKFRSIADEVGAYLLADIAHIAGLVASGLHPDPIPHCHVVTTTTHKTL-------------RGPR-GGLILT-----SDAELGKKLDKSVFPGTQGGPLEHVIAGKAVAFGEALKP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCHJ (Serine hydroxymethyltransferase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 83/206 (40.29%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD+I+GLD +GGHLSHGY K++ + +F+ Y ++ + +DY+ +E+ A+ +P ++ICG S+Y R+ D+ RFRQIADK A L+ D+AHI+GLIAA + SP Y I+TSTT K+L + PR I N + + +I+ V P +QGGP + IAA A+A K+ P Sbjct: 98 ANAAVFAALLKPGDKILGLDLNAGGHLSHGY------KINFSGMFYSGISYFLD-ENELLDYDAIEKIALKTKPNLIICGYSAYSRKIDFARFRQIADKVNAFLLADIAHIAGLIAAGQHPSPVGYAHIITSTTQKTL-------------RGPRGGLILTN------SKEIAAKIDKVVFPGIQGGPFFHTIAAKAVAFKEALEP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCH2 (Serine hydroxymethyltransferase OS=Mycoplasma hyopneumoniae (strain 232) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 83/206 (40.29%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD+I+GLD +GGHLSHGY K++ + +F+ Y ++ + +DY+ +E+ A+ +P ++ICG S+Y R+ D+ RFRQIADK A L+ D+AHI+GLIAA + SP Y I+TSTT K+L + PR I N + + +I+ V P +QGGP + IAA A+A K+ P Sbjct: 98 ANAAVFAALLKPGDKILGLDLNAGGHLSHGY------KINFSGMFYSGISYFLD-ENELLDYDAIEKIALKTKPNLIICGYSAYSRKIDFARFRQIADKVNAFLLADIAHIAGLIAAGQHPSPVGYAHIITSTTQKTL-------------RGPRGGLILTN------SKEIAAKIDKVVFPGIQGGPFFHTIAAKAVAFKEALEP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 81/206 (39.32%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A+Y LL PGD ++GL SGGHL+HGY ++S + IF++S+ Y VN Q G +DY+++ + A + +PK++ICG S+Y + D+ +FR+IAD GA L D+AHISGL+ A SP Y D+V +TTHK+L + + I L +N + ++I+ AV P QGGP + IAA A++ + P Sbjct: 98 ANAAIYMALLNPGDSVLGLSLDSGGHLTHGY------RISFSGIFYKSYTYTVN-QDGVLDYDEILKIAQEVKPKMIICGYSAYSQIVDFAKFREIADAVGAYLFADIAHISGLVIANLHPSPMGYADVVATTTHKTL--------------RGTRGAIILT-----NNEEIAKKIDRAVFPGNQGGPLFHQIAAKAVSFYEALQP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELHP (Serine hydroxymethyltransferase OS=Helicobacter hepaticus GN=glyA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.527e-34 Identity = 85/206 (41.26%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L P D+I+G+D GGHL+HG KVS + ++SF Y V G IDY+KL +A +P +L+CG S+Y RE D+ R R+IAD GA LM D+AH++GL+ A E +PF +C IVT+TTHK+L + PR I N + + +IN AV P +QGGP + IA A+ K+ P Sbjct: 98 ANAAVYAAILKPYDKILGMDLSHGGHLTHG------AKVSTSGQLYQSFFYGVE-LNGRIDYDKLALQAQVVKPNVLVCGFSAYTRELDFKRLREIADSVGAYLMGDIAHVAGLVVAGEYPNPFPHCHIVTTTTHKTL-------------RGPRGGAILTN------DEELYAKINKAVFPGIQGGPLMHIIAGKAVGFKENLKP 277 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |