CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSF (Serine hydroxymethyltransferase OS=Geobacter sp. (strain FRC-32) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.122e-33 Identity = 80/206 (38.83%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G++ GGHL+HG V+ + FF PY V ++ IDY ++E A++++PK+++ G S+YPR D+ FR+IADK GAV+M DMAHI+GL+AA SP + + VT+TTHK+L + PR G +F + +N + P +QGGP + IAA A+A K+ +P Sbjct: 97 ANMAVYFTVLKPGDTVLGMNLAHGGHLTHG------SPVNFSGKFFNIVPYGVTKESQTIDYAEVERLAVEHKPKMIVVGASAYPRTIDFAAFRKIADKVGAVVMVDMAHIAGLVAAGLHPSPVPHAEFVTTTTHKTL-------------RGPR-------GGMILCREEFAKALNSNIFPGIQGGPLMHVIAAKAVAFKEALSP 276
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.122e-33 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+T LL PGD I+G+ GGHL+HG V+ + ++ Y V+ QTG IDY+ L KA RPK++ G S+YPR D+ R RQIAD+ GA+LM D+AHI+GL+AA E SP + ++T+TTHK+L + PR G + GD DF +++N +V P QGGP + IA A+A + P Sbjct: 98 ANIAVFTALLQPGDTILGMRLDHGGHLTHG------SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTL-------------RGPR--GGLILMGD-----DFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.122e-33 Identity = 84/206 (40.78%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+T LL PGD I+G+ GGHL+HG V+ + ++ Y V+PQTG IDY+ L KA RPK++ G S+YPR D+ R RQIAD+ GA+LM D+AHI+GL+A E SP + I+T+TTHK+L + PR I + +F ++IN +V P QGGP + IA A+A + P Sbjct: 98 ANIAVFTALLQPGDTILGMRLDHGGHLTHG------SPVNFSGKWYNVHFYGVDPQTGQIDYDDLAAKARAIRPKLITSGASAYPRLIDFARMRQIADEVGALLMADIAHIAGLVATGEHPSPVGHAHIITTTTHKTL-------------RGPRGGLILMGE-------EFAKQINSSVFPGTQGGPLMHVIAGKAVAFGEALRP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMFF (Serine hydroxymethyltransferase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=glyA PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.122e-33 Identity = 83/201 (41.29%), Postives = 118/201 (58.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALK 604 AN VY L PGD+I+G+D GGHL+HG KVS++ +ESF Y V G I+Y K+EE A +PK+++CG S+Y RE D+ +FR+IAD GA L D+AHI+GL+ A E +PF +C +V+STTHK+L + PR I N + +F ++IN ++ P +QGGP + IA A+ K Sbjct: 96 ANQGVYGAFLKPGDKILGMDLSHGGHLTHG------SKVSSSGKNYESFFYGVELD-GRINYNKVEEIANITKPKMIVCGASAYAREIDFKKFREIADSVGAYLFADVAHIAGLVVAGEHNNPFPHCHVVSSTTHKTL-------------RGPRGGIIMTN------DEEFAKKINSSIFPGIQGGPLMHVIAGKAVGFK 270
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_HAHCH (Serine hydroxymethyltransferase 2 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.122e-33 Identity = 82/205 (40.00%), Postives = 117/205 (57.07%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AVY L PGD I+G+ GGHL+HG VS + +++ Y +NP+TG IDYE++ + A + +PK+++ G S+Y R D+ RFR IAD+ GA L DMAHI+GL+AA SP D+ T+TTHK+L + G+ L +N + E+++NFAV P QGGP + IAA A+ K+ T Sbjct: 101 ANAAVYMALCKPGDVILGMSLAHGGHLTHG------ASVSFSGRIYKAVQYGLNPETGEIDYEEVAKLARENKPKMIVAGFSAYSRVIDWERFRAIADEVGAYLFVDMAHIAGLVAAGVYPSPVQIADVTTTTTHKTLGGP--------------RGGLIL----AKANEELEKKLNFAVFPESQGGPLMHVIAAKAVCFKEAMT 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_STRSV (Serine hydroxymethyltransferase OS=Streptococcus sanguinis (strain SK36) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 79/206 (38.35%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L+ PGD +MG+D +GGHL+HG VS + + Y V+P+T +D++ + ++A + +PK+++ G S+Y D+ +FR+IAD GA LM DMAHI+GL+AA SP Y DI T+TTHK+L + PR G+ L + + + ++IN A+ P +QGGP + +AA A+A K+V P Sbjct: 101 ANCAAYMALIEPGDTVMGMDLSAGGHLTHG------ASVSFSGQTYNFVSYSVDPETELLDFDAILQQAKEVQPKLIVAGASAYSHIIDFSKFREIADAVGAKLMVDMAHIAGLVAAGLHPSPVPYADITTTTTHKTL-------------RGPR-GGLILTNDE-----ELAKKINSAIFPGIQGGPLEHVVAAKAVAFKEVLDP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RICTY (Serine hydroxymethyltransferase OS=Rickettsia typhi GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 87/209 (41.63%), Postives = 119/209 (56.94%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEE---RINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D I+G+ SGGHL+HG + + +F + Y V+ +T IDY++++ A+ + PK+LI G S+YPR+ D+ RFR+IADK GA LM D+AHI+GL+A E SP Y +VTSTTHK+L + PR G D+EE +IN A+ P LQGGP + IAA A+A + P Sbjct: 101 ANQAVYLALLQPCDTILGMSLDSGGHLTHG------AAPNISGKWFNTVAYNVDKETYLIDYDEIKRLAVLHNPKLLIAGFSAYPRKIDFARFREIADKVGAYLMADIAHIAGLVATGEHQSPIPYAHVVTSTTHKTL-------------RGPR---------GGLILSDYEEIGKKINSALFPGLQGGPLMHVIAAKAVAFLENLQP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM5 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9515) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 80/206 (38.83%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+G+D GGHL+HG V+ + +F + Y V+ +T +++ + + A+ +PK++ICG S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P YCD+VT+TTHK+L + PR G+ L C + +F ++ + +V P QGGP + IAA A+A + P Sbjct: 100 ANAAVFLSLLNPGDTILGMDLSHGGHLTHG------SPVNMSGKWFNAVHYGVDKETNKLNFNVIRDIALATKPKLIICGYSAYPRTIDFKSFRSIADEVGAFLMADIAHIAGLVASKLHPNPIPYCDVVTTTTHKTL-------------RGPR-GGLIL-----CKDKEFGKKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 84/206 (40.78%), Postives = 113/206 (54.85%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV +L PGDRIMGLD GGHL+HG V+ + +E+ Y V+ +TG ID K+EE A+ RPK++ICG S+Y + +D FR IADK GA LM D+AH +GLIAA L +P +C VT+TTHK+L + GI + G E ++ V P +QGGP + IA A+A + P Sbjct: 99 ANMAVLFSVLKPGDRIMGLDLSHGGHLTHG------SSVNFSGQMYEAHSYGVDRETGCIDMNKVEELALQVRPKLIICGASAYSQGFDVKAFRVIADKVGAFLMADIAHPAGLIAAGLLGNPLPHCHFVTTTTHKTLRGPRGGMIMMGSDFE-NPMGITIKTKTGSRLKMMSEVMDAEVMPGIQGGPLMHIIAGKAVAFGEALQP 297
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCGA (Serine hydroxymethyltransferase OS=Mycoplasma gallisepticum GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 81/206 (39.32%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y LL P D+++ + GGHL+HG KV+ + ++ + Y V+P T +DY+++ +KA++ +PK+++CG S+Y R D+ +FRQIAD A LM D+AHI+GLI A +P +YCDI+TSTTHK+L + PR GI L + + D ++I+ AV P GGP + IAA AIA + P Sbjct: 94 ANAAAYLALLQPHDKVLAMGLNDGGHLTHG------SKVNFSGKIYDFYHYNVDPNTYLLDYDEILKKAIEVKPKLIVCGASNYSRAIDFAKFRQIADHVSAYLMADIAHIAGLIVAGYHQNPVEYCDIITSTTHKTL-------------RGPR-GGIILTNRE-----DLIKKIDSAVFPGELGGPLMHVIAAKAIAFDEALQP 274 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |