CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_BURPS (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei GN=glyA2 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.165e-31 Identity = 80/205 (39.02%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AV L PGD ++G+ +GGHL+HG K + + +F + Y V+ T IDY+++E A ++P ++I G S+YPR+ D+ RFR IAD GA LM DMAHI+G+IAA A+P ++ +VTSTTHK+L + PR + N + + ++IN AV P LQGGP + IA A+A + T Sbjct: 105 ANGAVMLALAKPGDTVLGMSLDAGGHLTHG------AKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL-------------RGPRGGFVLTN------DEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT 284
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_BURP1 (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei (strain 1710b) GN=glyA2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.165e-31 Identity = 80/205 (39.02%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AV L PGD ++G+ +GGHL+HG K + + +F + Y V+ T IDY+++E A ++P ++I G S+YPR+ D+ RFR IAD GA LM DMAHI+G+IAA A+P ++ +VTSTTHK+L + PR + N + + ++IN AV P LQGGP + IA A+A + T Sbjct: 105 ANGAVMLALAKPGDTVLGMSLDAGGHLTHG------AKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL-------------RGPRGGFVLTN------DEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALT 284
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THELT (Serine hydroxymethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 78/202 (38.61%), Postives = 113/202 (55.94%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN A Y + PGD +MG+ GGHL+HG V+ + F+ Y VNP+T I+Y+++ A+ Y+PKI++ GGS+Y R D+ +FR+IAD+ GA L+ DMAH +GL+AA +P +Y IVTSTTHK+L + PR I N + + + +N V P QGGP + IAA A+ K+ Sbjct: 98 ANMAAYLSIAEPGDVLMGMSLSHGGHLTHG------ASVNFSGKLFKVIQYGVNPETEMINYDEVRSMALQYKPKIIVAGGSAYSRIIDFKKFREIADEAGAYLVVDMAHFAGLVAAGLYPNPAEYAHIVTSTTHKTL-------------RGPRGGLILTN------DAEIYKAVNKTVFPGTQGGPLMHVIAAKAVCFKE 274
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SHEHH (Serine hydroxymethyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 78/206 (37.86%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL GD ++G+ GGHL+HG H VS + + + Y ++ TG IDY ++E A++++PK++I G S+Y D+G+FR+IADK GA L DMAH++GL+AA SP + +VT+TTHK+L + G+ L+ ++ D +++N AV P QGGP + IAA A+A K+ P Sbjct: 101 ANAAVFMALLQGGDTVLGMSLAHGGHLTHGSH------VSFSGKLYNAVQYGIDETTGKIDYAEVERLAVEHKPKMIIAGFSAYSGIVDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPSPMPHAHVVTTTTHKTLAGP--------------RGGLILS---AINDEDIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALDP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_NITEC (Serine hydroxymethyltransferase OS=Nitrosomonas eutropha (strain C91) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 81/206 (39.32%), Postives = 114/206 (55.34%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PGD ++G+ GGHL+HG V+ + F S Y ++P+T IDY +LE+ A +++P++++ G SSY R D+ FR+IAD GA L DMAH +GLIAA +P D VTS+THK+L + PR G + + E+ +N AV P QGGP + IAA A+A K+ A+P Sbjct: 101 ANAAVYLSALKPGDTLLGMSLAHGGHLTHG------APVNMSGKIFNSIAYGLDPETEEIDYTELEQLAHEHKPRMIVAGASSYARVIDWQAFRKIADNVGAYLFVDMAHYAGLIAAGYYPNPVGIADFVTSSTHKTL-------------RGPR-------GGVIMAKPEHEKALNSAVFPQTQGGPLMHVIAAKAVAFKEAASP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_GEOKA (Serine hydroxymethyltransferase OS=Geobacillus kaustophilus GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 80/200 (40.00%), Postives = 115/200 (57.50%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIAL 601 AN AVY +L GD ++G++ GGHL+HG V+ + I + Y V+P+T IDY+ + EKA +RPK+++ G S+YPR D+ +FR+IAD+ GA LM DMAHI+GL+AA +P Y VT+TTHK+L + PR G F ++I+ A+ P +QGGP + IAA A+AL Sbjct: 97 ANMAVYFTVLEHGDTVLGMNLSHGGHLTHG------SPVNFSGIQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGVHPNPVPYAHFVTTTTHKTL-------------RGPR-------GGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAL 270
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G+D GGHL+HG V+ + F Y V+ +T IDYE + + A++ +PK+++ G S+Y R D+ +FR+IAD+ GA+LM DMAHI+GL+AA SP Y D VT+TTHK+L + PR G+ L C + + +N + P +QGGP + IAA A+ K+ P Sbjct: 99 ANMAVYFAVLEPGDTVLGMDLSHGGHLTHG------SPVNFSGKLFNFVSYGVDKETEMIDYENVRKLAIENKPKLIVAGASAYARILDFPKFREIADEVGALLMVDMAHIAGLVAAGVHPSPVPYSDFVTTTTHKTL-------------RGPR-GGLIL-----CKE-KYAQILNKNIFPGIQGGPLEHIIAAKAVCFKEALDP 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUO2 (Serine hydroxymethyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=glyA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARPARENKPKLILAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_TRIEI (Serine hydroxymethyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 79/206 (38.35%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD IMG+D GGHL+HG V+ + +F++ Y VN +T IDY+++ E A ++PK+LICG S+Y + ++ +FR IAD+ GA L+ D+AHI+GL+A +P +CD+VT+TTHK+L + PR G+ L + + ++++ +V P QGGP + IAA A+A + P Sbjct: 100 ANLAVFLTLLKPGDTIMGMDLSHGGHLTHG------SPVNISGKWFKAHHYGVNKETEAIDYDQVLELAKKHKPKLLICGYSAYSQIINFEKFRAIADEVGAYLLADIAHIAGLVATGHHPNPVPHCDVVTTTTHKTL-------------RGPR-GGLILTR-----DSELGKKLDKSVFPGTQGGPLEHVIAAKAVAFGEALKP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THEYD (Serine hydroxymethyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/202 (39.60%), Postives = 111/202 (54.95%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN AVY +L PGD IMG+ GGHLSHG V+ +++ Y VN +TGYID +++ A +++PKI+I G S+YPR D+ F +IA + GA LM D+AHI+GLIA SP Y D +T+TTHK+L + PR G + + I+ V P +QGGP + IAA A+A K+ Sbjct: 99 ANMAVYFAMLQPGDTIMGMSLTHGGHLSHG------SPVNFTGKLYKTVFYGVNKETGYIDMDEVRRLAQEHKPKIIITGASAYPRTIDFKAFSEIAKEVGAYLMADIAHIAGLIATSMHPSPVPYSDFITTTTHKTL-------------RGPR-------GGVVMCKAQYAKAIDKTVFPGIQGGPLVHVIAAKAVAFKE 274 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |