CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_KLEP7 (Serine hydroxymethyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 78/206 (37.86%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAVYT LL PGD ++G++ GGHL+HG V+ + + PY ++ ++G IDY+ + ++A +++PK++I G S+Y D+ + R+IAD GA L DMAH++GLIAA +P + +VT+TTHK+L + G+ L G + + +++N AV PS QGGP + IAA A+ALK+ P Sbjct: 101 ANFAVYTALLQPGDTVLGMNLAQGGHLTHG------SPVNFSGKLYNIIPYGID-ESGKIDYDDMAKQAQEHKPKMIIGGFSAYSGIVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGP--------------RGGLILAKG---GSEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_KLEP3 (Serine hydroxymethyltransferase OS=Klebsiella pneumoniae (strain 342) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 78/206 (37.86%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAVYT LL PGD ++G++ GGHL+HG V+ + + PY ++ ++G IDY+ + ++A +++PK++I G S+Y D+ + R+IAD GA L DMAH++GLIAA +P + +VT+TTHK+L + G+ L G + + +++N AV PS QGGP + IAA A+ALK+ P Sbjct: 101 ANFAVYTALLQPGDTVLGMNLAQGGHLTHG------SPVNFSGKLYNIIPYGID-ESGKIDYDDMAKQAQEHKPKMIIGGFSAYSGIVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGP--------------RGGLILAKG---GSEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_FRAP2 (Serine hydroxymethyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 78/206 (37.86%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G+D +GGHL+HG KV+ + + S Y ++ ++G IDY+++ E A +++PK++I G S++ D+ +FR+IAD AVLM D+AH++GL+AA +PF Y D+ T+TTHK+L + PR I N N D ++ A+ P +QGGP + IAA A+A K+ P Sbjct: 102 ANAAVYNAVLKPGDTVLGMDLGAGGHLTHG------SKVNFSGKIYNSIQYGLS-ESGDIDYKQVAELAKEHKPKMIIAGFSAFSGIIDWKKFREIADSVDAVLMADIAHVAGLVAAGLYPNPFPYVDVATTTTHKTL-------------RGPRGGLILCN-----DNPDLAKKFQSAIFPGIQGGPLMHVIAAKAVAFKEALEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_DESOH (Serine hydroxymethyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 83/205 (40.49%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AVY LL PGD +G+D GGHL+HG VS + F+ Y V +TG IDY+++ + A +RPK++I G S+YPR D+ +F QIA A L+ DMAHI+GL+AA SP + D+VTSTTHK+L + PR G+ L+ + DF + +N + P +QGGP + IAA A+A + T Sbjct: 99 ANMAVYFALLSPGDTGLGMDLAHGGHLTHG------SPVSFSGRLFDFKHYGVKKETGTIDYDQVADLAKTHRPKMIIAGASAYPRTLDFEKFAQIAASVEACLVVDMAHIAGLVAAGVHPSPVPHADVVTSTTHKTL-------------RGPR-GGLILS-----ARADFGKALNKEIFPGIQGGPLMHVIAAKAVAFGEALT 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_COREF (Serine hydroxymethyltransferase OS=Corynebacterium efficiens GN=glyA PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 81/205 (39.51%), Postives = 114/205 (55.61%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AV L PGD+IMGL GGHL+HG K++ + +E Y V+P T +D +++ E+A+ +PK++I G S+YPR D+ FR+IAD+ GA L DMAH +GL+AA SP Y D+V+ST HK+L + GI L + D+ +++N +V P QGGP + IAA A ALK T Sbjct: 108 ANAAVLMTLADPGDKIMGLSLAHGGHLTHGM------KLNFSGKLYEVAAYGVDPDTMLVDMDQVREQAIKEQPKVIIAGWSAYPRHLDFAAFREIADEVGATLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGGP--------------RSGIIL------AKQDYAKKLNSSVFPGQQGGPLMHAIAAKATALKIAGT 286
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUSI (Serine hydroxymethyltransferase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUME (Serine hydroxymethyltransferase OS=Brucella melitensis GN=glyA PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRIWDWKRFREIADEVGACLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUMB (Serine hydroxymethyltransferase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUAB (Serine hydroxymethyltransferase OS=Brucella abortus GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BRUA2 (Serine hydroxymethyltransferase OS=Brucella abortus (strain 2308) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 293 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |