CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_RHORT (Serine hydroxymethyltransferase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glyA1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.570e-36 Identity = 88/206 (42.72%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+GLD +GGHL+HG V+ + +F + Y V+P+T ID E++ + A +RPK+LI GGS+YPR D+ RFRQIAD+ GA+LM DMAH +GL+A SP + D++TSTTHK+L + PR + N + ++IN AV P LQGGP + IAA A+A + P Sbjct: 116 ANQAVFLALLAPGDTILGLDLKAGGHLTHG------APVNISGRWFTAVSYGVDPRTHLIDMEQMADLARRHRPKLLIAGGSAYPRLLDFARFRQIADEVGAILMVDMAHFAGLVAGGVYPSPVPFADVITSTTHKTL-------------RGPRGGFVLTN------DAAIAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALDP 296
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNPX (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain WH8102) GN=glyA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.051e-36 Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMGLD GGHL+HG V+ + +F Y V+ +T +D E + + A++++PK+++CG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + DF ++ + AV P QGGP + IAA A+A + P Sbjct: 106 ANFAVFLALLQPGDTIMGLDLSHGGHLTHG------SPVNVSGKWFNVVQYGVDRETQRLDMEAIRQLALEHKPKLIVCGFSAYPRTIDFAAFRAIADEVGAFLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDADFAKKFDKAVFPGSQGGPLEHVIAAKAVAFGEALQP 286
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LYSSC (Serine hydroxymethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.051e-36 Identity = 84/206 (40.78%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G++ GGHL+HG V+ + I + Y V T IDYE + +KA++++PK+++ G S+YPRE D+ +FR+IAD+ GA M DMAHI+GL+A E SP Y D VTSTTHK+L + PR G+ L ++ ++E+++N +V P +QGGP + IAA A+A +V P Sbjct: 99 ANMAVYHTILEPGDTVLGMNLSHGGHLTHG------SPVNFSGILYNFVEYGVTKDTQVIDYEDVRQKALEHKPKLIVAGASAYPREIDFSKFREIADEVGAYFMVDMAHIAGLVAVGEHQSPVPYADFVTSTTHKTL-------------RGPR-GGLIL------ASKEWEQKLNKSVFPGIQGGPLMHVIAAKAVAFGEVLQP 278
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP8 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glyA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F+ Y VNP T +DY+++ E A+ RPK+LICG S+YPR ++ +FR IAD+ GA LM D+AHI+GL+A SP YCD+VT+TTHK+L + PR G+ L + D ++ + AV P QGGP + IAA +A + P Sbjct: 102 ANFAVFLALLSPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKVCHYGVNPDTERLDYDQIRELALKERPKLLICGYSAYPRIIEFDKFRAIADEIGAYLMADIAHIAGLVATGHHPSPISYCDVVTTTTHKTL-------------RGPR-GGLILTR-----DADLGKQFDKAVFPGTQGGPLEHVIAAKGVAFGEALKP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36 Identity = 89/212 (41.98%), Postives = 120/212 (56.60%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ +L PGD+ MGL+ GGHLSHG V+ + I + Y +N +TG +DY+++EE A+ +PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I + + ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANAAVFLAVLNPGDKFMGLNLAHGGHLSHG------SLVNTSGIIYTPCEYNLNKETGRVDYDQMEEIALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKM----------MSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNR3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain RCC307) GN=glyA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36 Identity = 82/206 (39.81%), Postives = 125/206 (60.68%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD I+G+D GGHL+HG V+ + +F++ Y V+P+T ++ E + + A++++PK+++CG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +C +VT+TTHK+L + PR G+ L C++ DF ++ + AV P QGGP + +AA A+A + P Sbjct: 100 ANFAVFLALLKPGDTILGMDLSHGGHLTHG------SPVNVSGKWFKAVHYGVDPETQQLNLESIRQLALEHKPKLIVCGYSAYPRSIDFAGFRAIADEVGAYLLADMAHIAGLVAAGVHPSPVPHCHVVTTTTHKTL-------------RGPR-GGLIL-----CNDADFAKQFDKAVFPGTQGGPLEHVVAAKAVAFGEALQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_ERYLH (Serine hydroxymethyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=glyA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36 Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V ID +++ E A +++PK++ICGG++Y R WD+ RFR+IAD+ A L+CDM+HISGL+A SPF + IVTSTTHKSL + PR GI L ++ D + +N AV P LQGGP + +AA A+A ++ P Sbjct: 114 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNISGKWFNPVSYGVRKDDELIDMDEVAETAREHKPKLIICGGTAYSRLWDFPRFREIADEVDATLLCDMSHISGLVAGGAHPSPFPHAHIVTSTTHKSL-------------RGPR-SGIIL-----WNDEDLTKPLNMAVFPGLQGGPLMHVVAAKAVAFREALRP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNSC (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain CC9605) GN=glyA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.569e-36 Identity = 85/206 (41.26%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMGLD GGHL+HG V+ + +F Y V+ +T +D E + + A++++PK+++CG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + +F ++ + AV P QGGP + IAA A+A + P Sbjct: 106 ANFAVFLALLQPGDTIMGLDLSHGGHLTHG------SPVNVSGKWFNVVQYGVDKETQRLDMEAIRQLALEHKPKLIVCGYSAYPRTIDFAAFRAIADEVGAYLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDAEFAKKFDKAVFPGSQGGPLEHVIAAKAVAFGEALQP 286
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNPW (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain WH7803) GN=glyA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.569e-36 Identity = 85/206 (41.26%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMGLD GGHL+HG V+ + +F Y V+ +T +D E + + A++++PK+++CG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + +F ++ + AV P QGGP + IAA A+A + P Sbjct: 106 ANFAVFLALLQPGDTIMGLDLSHGGHLTHG------SPVNVSGKWFNVVQYGVDKETQRLDMEAIRQLALEHKPKLIVCGFSAYPRTIDFAAFRAIADEVGAYLLADMAHIAGLVAAGVHPSPVPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDAEFAKKFDKAVFPGSQGGPLEHVIAAKAVAFGEALRP 286
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM3 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=glyA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.968e-36 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F+ Y V P + +D E + + A+ RP+++ICG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + DF + + AV P QGGP + IAA A+AL + P Sbjct: 106 ANFAVFLALLQPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKVVHYGVEPDSQQLDMEAVRQLALKERPQLIICGYSAYPRTIDFAAFRSIADEVGAYLLADMAHIAGLVAAGVHPSPIAHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDADFGRKFDKAVFPGSQGGPLEHVIAAKAVALGEALQP 286 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |