CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_STRPZ (Serine hydroxymethyltransferase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 81/206 (39.32%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L+ GD ++G+D +GGHL+HG V+ + + Y V+ T ++YE + E+A +PK+++ G S+Y R D+ +FR IAD GA LM DMAHI+GL+AA SP Y IVTSTTHK+L + PR G+ L + + + ++IN AV P LQGGP + IAA A+A K+ P Sbjct: 101 ANAAAYMALIEAGDTVLGMDLAAGGHLTHG------SPVNFSGKTYHFVSYSVDADTEMLNYEAILEQAKAVQPKLIVAGASAYSRSIDFEKFRAIADHVGAYLMVDMAHIAGLVAAGVHPSPVPYAHIVTSTTHKTL-------------RGPR-GGLILTNDEALA-----KKINSAVFPGLQGGPLEHVIAAKAVAFKEALDP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_OCHA4 (Serine hydroxymethyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 80/205 (39.02%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ A + +PK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A SP + + T+TTHKSL + PR I N + D ++IN AV P LQGGP + IA A+A + P Sbjct: 115 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVRKDDHLLDMDEVARLARENKPKLILAGGTAYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGGVHPSPVPHAHVCTTTTHKSL-------------RGPRGGMILTN------DADIAKKINSAVFPGLQGGPLMHVIAGKAVAFAEALKP 294
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 77/202 (38.12%), Postives = 117/202 (57.92%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN VY L PGD ++G+ GGHL+HG V+ + +F Y + TG ID++K+ E A +++PK+++ G S+YPR D+ FR+IAD+ GA LM DMAHI+GL+AA +P Y D VT+TTHK+L + PR G+ L C ++++ I+ A+ P LQGGP + IA+ A++ ++ Sbjct: 97 ANMGVYLAALKPGDTVLGMSLDHGGHLTHG------SPVNISGKYFNFHHYGILEDTGKIDFDKVRELAKEHKPKMIVAGASAYPRIIDFATFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTL-------------RGPR-GGVVL-----CKE-EYKKEIDKAMFPGLQGGPLMHVIASKAVSFQE 272
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCCT (Serine hydroxymethyltransferase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 75/205 (36.59%), Postives = 118/205 (57.56%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN A Y LL P DR++ + +GGHL+HGY ++ + ++ Y VN T +DY+++E+ ++++PK+++ G S+Y R D+ +F++IADK GA LM DMAHI+GL+AA +P +Y DIVT+TTHK+L + + G+ L +F ++++ AV P QGGP N IA AL + +T Sbjct: 95 ANDAAYKALLEPKDRVVAMGLDAGGHLTHGY------PINFSGYTYDFRFYGVNKDTEQLDYQEIEQIVLEHKPKLIVAGASAYSRIIDFKKFKEIADKVGAYLMVDMAHIAGLVAAGVHPNPMEYADIVTTTTHKTL--------------RGARGGLIL------CKQEFAKKVDSAVFPGSQGGPLENLIAGKTQALLEAST 273
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LEUMM (Serine hydroxymethyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 79/206 (38.35%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L PGD+I+G+ +GGHL+HG KVS + +ES Y +N +T +DYE + ++A + +P++++ G S+Y R ++ +FR IAD+ GA LM DMAHI+GL+AA +P D+VTSTTHK+L + PR G+ L S + +++N A+ P QGGP + IA AIA + P Sbjct: 96 ANAAAYMAFLKPGDKILGMSLDAGGHLTHG------AKVSFSGKVYESHTYGLNSETETLDYEAIAKQAREVKPQMIVAGASAYSRIIEFDKFRAIADEVGAYLMVDMAHIAGLVAAGLHPNPVGIADVVTSTTHKTL-------------RGPR-GGVIL------SQEKYAKQLNSAIFPGSQGGPLEHIIAGKAIAFGEALQP 275
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_AZOPC (Serine hydroxymethyltransferase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 85/216 (39.35%), Postives = 116/216 (53.70%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYD----------FEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ L PGD +GL GGHLSHG V+ + + +++ Y + G I+Y++LE AM+ PK++I G S+Y R+WDY R R IADK GA+ M DMAH +GLIAA+ L +P Y IVTSTTHK+L + PR GI L D + + E ++ A+ P +QGGP + IAA AIA + P Sbjct: 93 ANMTVFLACLQPGDYFLGLGLSHGGHLSHG------SPVNFSGLSYKALEYGTEKENGKINYQQLEYVAMEKIPKLIIAGASAYSRDWDYQRIRLIADKIGAIFMVDMAHPAGLIAAQLLDNPLHYAHIVTSTTHKTL-------------RGPR-GGIILMGKDFENPWGRTTTKGKIKMMSEILDSALFPGVQGGPLEHIIAAKAIAFYEALQP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCTU (Serine hydroxymethyltransferase 1 OS=Mycobacterium tuberculosis GN=glyA1 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV L+ PG+R++GLD +GGHL+HG +++ + +E+ Y V+P T ID + + A+++RPK++I G S+YPR D+ FR IAD+ GA L+ DMAH +GL+AA SP + D+V++T HK+L + G+ + + + IN AV P QGGP + IA A+ALK ATP Sbjct: 98 ANAAVLHALMSPGERLLGLDLANGGHLTHGM------RLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGG--------------RSGLIV------GKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_MYCBO (Serine hydroxymethyltransferase 1 OS=Mycobacterium bovis GN=glyA1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV L+ PG+R++GLD +GGHL+HG +++ + +E+ Y V+P T ID + + A+++RPK++I G S+YPR D+ FR IAD+ GA L+ DMAH +GL+AA SP + D+V++T HK+L + G+ + + + IN AV P QGGP + IA A+ALK ATP Sbjct: 98 ANAAVLHALMSPGERLLGLDLANGGHLTHGM------RLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGG--------------RSGLIV------GKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_ERWCT (Serine hydroxymethyltransferase 1 OS=Erwinia carotovora subsp. atroseptica GN=glyA1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.426e-31 Identity = 81/206 (39.32%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAVYT LL PGD I+G++ GGHL+HG V+ + ++ PY ++ ++G IDY+++ E A ++PK+++ G S+Y D+ + R+IAD GA L DMAH++GLIAA +P + IVT+TTHK+L PR I GD D +++N AV P QGGP + IA A+ALK+ P Sbjct: 101 ANFAVYTALLQPGDTILGMNLAHGGHLTHG------SPVNLSGKLYKVIPYGID-ESGKIDYDEMAELARTHQPKMIVGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAADVYPNPVPHAHIVTTTTHKTLAG-------------PRGGLILAKGGD----EDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFT (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=glyA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.780e-31 Identity = 81/206 (39.32%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGD I+G+ GGHL+HG + V+ + F + Y VN Q G IDYE +E A+++RPK+++ G S+Y ++ D+ RFR IAD+ GA L+ DMAH++GL+AA SP + +VTSTTHK+L + PR I +++ V P +QGGP + IAA A+A K+ P Sbjct: 101 ANQAVYFALLQPGDTILGMSLAHGGHLTHGAN------VNVSGKLFNAVQYGVNAQ-GLIDYEAVESLALEHRPKMVVAGFSAYSQKIDWARFRAIADQVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTSTTHKTL-------------RGPRGGIIVAQ----APQEALVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEP 282 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |