CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CORDI (Serine hydroxymethyltransferase OS=Corynebacterium diphtheriae GN=glyA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.859e-31 Identity = 80/205 (39.02%), Postives = 110/205 (53.66%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AV L PGD+IMGL GGHL+HG H K+ +E Y+V P +D +K+ E+A+ +P++LI G S+YPR D+ FR IAD+ A L DMAH +GL+AA SP Y D+V++T HK+L PR G S ++ +++N AV P QGGP + I A A+A+K AT Sbjct: 103 ANAAVLMALANPGDKIMGLSLAHGGHLTHGMHLNFSGKL------YEVAAYEVEPDNFRLDMDKIREQALKEKPQVLIAGWSAYPRHQDFAAFRSIADEVDAKLWVDMAHFAGLVAAGLHPSPVPYADVVSTTVHKTLGG-------------PRS-------GMILSKQEYAKKLNSAVFPGQQGGPLMHAIVAKAVAMKIAAT 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CLOD6 (Serine hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=glyA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.859e-31 Identity = 74/202 (36.63%), Postives = 121/202 (59.90%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN VY +L PGD +MG++ GGHL+HG V+ + +++ + Y ++ +G ID++++ + A + +PK+++ G S+YPRE D+ +FR+IAD+ GA+LM DMAHI+GL+AA +P + D VT+TTHK+L + PR G+ L C + + I+ A+ P +QGGP + IA+ A+ K+ Sbjct: 98 ANIGVYFAMLKPGDVVMGMNLSQGGHLTHG------APVNISGQYYKFYEYGIDKDSGLIDFDEVRKIAHEVKPKMIVAGASAYPREIDFKKFREIADEVGALLMVDMAHIAGLVAAGLHQNPCEVADFVTTTTHKTL-------------RGPR-GGVIL-----CKE-KYAKDIDKAIFPGIQGGPLEHIIASKAVCFKE 273
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SERP5 (Serine hydroxymethyltransferase OS=Serratia proteamaculans (strain 568) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 82/206 (39.81%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAVYT LL PGD I+G++ GGHL+HG V+ + + PY ++ + G IDYE L ++A ++PK++I G S++ D+ + R+IAD GA L DMAH++GLIAA +P + IVT+TTHK+L PR I GD D +++N AV P QGGP + IA A+ALK+ P Sbjct: 101 ANFAVYTALLQPGDTILGMNLAHGGHLTHG------SPVNLSGKLYNVVPYGID-EKGQIDYEDLAKQAQTHKPKMIIGGFSAFSGIVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHIVTTTTHKTLAG-------------PRGGLILAKGGD----EDLYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 81/212 (38.21%), Postives = 111/212 (52.36%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGD +GLD GGHL+HG V+ + I +E+ Y V +TG ID ++ ++A + +PK++ G S+YPR++DY FR+IAD+ GA L DMAH +GLIA L P + +VT+TTHK+L K RK G E ++ AV P QGGP + IAA A+ K+ P Sbjct: 97 ANSAVYLTLLDPGDTFLGLDLSHGGHLTHG------SPVNFSGILYEAEYYGVEEETGRIDMNRVRDRAKEVQPKMISIGASAYPRDFDYEAFREIADEVGAFLWMDMAHTAGLIAGGVLNDPMPHTHVVTTTTHKTLRGPRGGMILLGDDYENPMGKTARKSG---------RTKMMSELLDSAVFPGTQGGPLMHVIAAKAVGFKEALKP 293
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_MYCS5 (Serine hydroxymethyltransferase OS=Mycoplasma synoviae (strain 53) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 77/206 (37.38%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A ++ G +IMGL SGGHL+HGY K+S + IF+ S Y+V + G +DYE++++ A+ +P ++ICG S+YPR D+ +FR+IAD CGA LM D+AHI+GLIA SP Y ++TSTTHK+ + + G+ + + + + ++++ V P QGGP + IA AIA + P Sbjct: 98 ANAAAIASVVPNGGKIMGLSLKSGGHLTHGY------KISFSGIFYNSITYEVG-KNGKLDYEEIKKIALAEKPDLIICGYSAYPRLIDFKKFREIADLCGAKLMADVAHIAGLIAGGVHPSPVGYAHVITSTTHKTF--------------RGARGGVIMTNDE-----EIAKKVDRWVFPGYQGGPLFHAIAGKAIAFYEALQP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LACBA (Serine hydroxymethyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PGD I+G+ +GGHL+HG KV+ + + S+ Y +NP+T +DY+ + + A +P++++ G S+Y R D+ FR IAD+ GA LM DMAHI+GL+A SP D+VT+TTHK+L + PR G+ L+ + ++IN AV P QGGP + IA A A + + P Sbjct: 96 ANQAVYAAFLKPGDTILGMGLDAGGHLTHG------AKVNFSGKLYNSYSYALNPETELLDYDMIRDLARKVKPQLIVAGASAYSRTIDWQAFRSIADEVGAYLMVDMAHIAGLVATGLHPSPVGIADVVTTTTHKTL-------------RGPR-GGLILSQAENA------KKINSAVFPGTQGGPLEHVIAGKAAAFFEDSQP 275
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_FRATN (Serine hydroxymethyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 76/206 (36.89%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY +L PGD ++G+D +GGHL+HG KV+ + + S Y ++ + G IDYE++ + A +++PK++I G S++ ++ +FR+IAD AVLM D+AH++GL+AA +PF Y D+ T+TTHK+L + PR I N +N + ++ A+ P +QGGP + IAA A+A K+ P Sbjct: 102 ANAAVYNAVLKPGDTVLGMDLGAGGHLTHG------SKVNFSGKIYNSIQYGLD-ENGDIDYEQVAQLAKEHKPKMIIAGFSAFSGIINWQKFREIADSVDAVLMADIAHVAGLVAAGVYPNPFPYVDVATTTTHKTL-------------RGPRGGLILCN-----NNPELAKKFQSAIFPGIQGGPLMHVIAAKAVAFKEALEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CORJK (Serine hydroxymethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=glyA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 77/205 (37.56%), Postives = 114/205 (55.61%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AV L PGD+IMGL GGHL+HG H K+ +E Y+V+P+T +D +K+ E+A+ +P++LI G S+YPR D+ F+ IAD+ GA L DMAH +GL+AA SP + D+V++T HK+L PR G + ++ +++N +V P QGGP + +AA A+A+K T Sbjct: 112 ANAAVLMSLANPGDKIMGLSLAHGGHLTHGMHLNFSGKL------YEVAAYEVDPETFRLDMDKIREQAIAEKPQVLIAGWSAYPRHQDFAAFKSIADEVGAKLWVDMAHFAGLVAADLHPSPVPHADVVSTTVHKTLGG-------------PRS-------GMILAKQEYAKKLNSSVFPGQQGGPLMHAVAAKAVAMKVAQT 290
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 78/206 (37.86%), Postives = 112/206 (54.37%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L PGD ++G++ GGHL+HG V+ + + Y V P T I+YEK+ E A ++PK+++ G S+YPR D+ ++IAD+ GA LM DMAHI+GL+AA SP Y D+VT+TTHK+L + PR G + +I+ V P +QGGP + IAA A+A K+ +P Sbjct: 101 ANMAAYMAFLEPGDTVLGMNLAHGGHLTHG------SPVNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAGASAYPRVIDFKHLKEIADEVGAYLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTL-------------RGPR-------GGVIFCKAEHAAKIDKTVFPGVQGGPLMHVIAAKAVAFKEALSP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_AYWBP (Serine hydroxymethyltransferase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=glyA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.288e-30 Identity = 78/207 (37.68%), Postives = 122/207 (58.94%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFD-YCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ LL PGD+I+GL GGHL+HG+ K+S + F+E+ Y VNPQT +DY+++ + A+ +PK++I G S+Y + ++ +FRQIAD+ A L+ D+AHI+GL+A PF+ D+VTST HK+L + PR G+ L + + + ++IN + P +QGGP + IAA A+A ++ P Sbjct: 113 ANMGVFQALLKPGDKILGLSLMDGGHLTHGH------KLSFSGGFYEAHFYNVNPQTEMLDYDEIRKVALAVKPKLIIAGYSAYSKTINFKKFRQIADEVNAYLIADIAHIAGLVACGLHPCPFEANADVVTSTMHKTL-------------RGPR-GGLILTNKE-----ELFKKINRGIFPGIQGGPCIHTIAAKAVAFQEAMMP 294 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |