CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM9 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 83/206 (40.29%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD IMG+D GGHL+HG V+ + +F + Y VN +T ++++++ E A++ +PK++ICG S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P YCD+VT+TTHK+L + PR G+ L C + +F ++ + +V P QGGP + IAA A+A + P Sbjct: 100 ANAAVFLSLLQPGDTIMGMDLSHGGHLTHG------SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPLPYCDVVTTTTHKTL-------------RGPR-GGLIL-----CKDGEFGKKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPL (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Lens) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 86/206 (41.75%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV LL PGD MG+ P GGHL+HG KV+ + + S Y V+ TG IDY+ LE+ A+ ++PK++I G S+Y R D+ RFR+IADK GA LM D+AH++GL+A SP Y D+VT+TTHK+L + PR I N + E+++N AV P +QGGP + IAA A+A + P Sbjct: 101 ANAAVMMALLSPGDTFMGMALPHGGHLTHG------SKVNFSGKLYHSVEYGVDNNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTL-------------RGPRGGLILCK-----ENEEIEKKLNSAVFPGMQGGPLMHVIAAKAVAFAEALLP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THEFY (Serine hydroxymethyltransferase OS=Thermobifida fusca (strain YX) GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 84/205 (40.98%), Postives = 121/205 (59.02%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN AVY LL PGD I+GLD GGHL+HG +++ + + Y V G IDY+++E A +++PK++I G S+YPR+ D+ RFR+IAD+ GA+LM DMAH +GL+AA +P Y D+VT+TTHK+L + G+ L + + ++IN AV P +QGGP + IAA A+ALK A+ Sbjct: 105 ANTAVYFALLQPGDTILGLDLAHGGHLTHGM------RINYSGKILNAVAYHVRESDGLIDYDEVEALAKEHQPKLIIAGWSAYPRQLDFARFREIADQTGALLMVDMAHFAGLVAAGLHPNPVPYADVVTTTTHKTLGGP--------------RGGLIL------AKEELGKKINSAVFPGMQGGPLQHVIAAKAVALKVAAS 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_METBF (Serine hydroxymethyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 AN AVY +L PGD IM +D GGHLSHG VS + F PY V+ +T +DY +L +KA + +P++++CG S+YPRE D+ +FR+IAD+ GA L+ D+AHI+GL+ A SP Y D VTSTTHK+L + PR GI ++ + + RIN AV P LQGGP + IA A+A K+ Sbjct: 97 ANMAVYFSVLKPGDTIMSMDLSHGGHLSHG------SPVSFSGKLFNIVPYGVSKKTEMLDYSELMKKAKENKPQMIVCGASAYPREIDFKQFREIADEVGAYLLADIAHIAGLVVAGVHPSPVPYADFVTSTTHKTL-------------RGPR-GGIIISKTE-----ELATRINKAVFPGLQGGPLMHIIAGKAVAFKE 273
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELP2 (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain P12) GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35 Identity = 86/206 (41.75%), Postives = 125/206 (60.68%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y VN GYIDYE++ + A +P+I++CG S+YPRE D+ +FR+IAD+ GA+L+ D+AH++GL+ A E A PF +C +V+STTHK+L + PR G+ L + + + +I+ A+ P QGGP + IAA A+ K+ P Sbjct: 98 ANNAVYHALLKPYDKILGMDLSCGGHLTHG------AKVSLTGKHYQSFSYGVNLD-GYIDYEEVLKIAQSVKPEIIVCGFSAYPREIDFKKFREIADEVGALLLGDIAHVAGLVVANEHAHPFPHCHVVSSTTHKTL-------------RGPR-GGLILTNDE-----EIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNP6 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glyA PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 83/206 (40.29%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD +G+D GGHL+HG V+ + +F + Y VN +T +DY+ + E A+ +RPK++ICG S+YPR D+ +FR+IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L + + ++++ +V P QGGP + IAA A+A + P Sbjct: 102 ANFAVFLTLLQPGDTFLGMDLSHGGHLTHG------SPVNVSGKWFNAGHYGVNRETERLDYDAIRELALQHRPKLIICGYSAYPRTIDFAKFREIADEVGAYLLADMAHIAGLVAAGLHPSPIPHCDVVTTTTHKTL-------------RGPR-GGLILTR-----DAELGKKLDKSVFPGTQGGPLEHVIAAKAVAFGEALRP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_SYNE7 (Serine hydroxymethyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 83/206 (40.29%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD +G+D GGHL+HG V+ + +F + Y VN +T +DY+ + E A+ +RPK++ICG S+YPR D+ +FR+IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L + + ++++ +V P QGGP + IAA A+A + P Sbjct: 102 ANFAVFLTLLQPGDTFLGMDLSHGGHLTHG------SPVNVSGKWFNAGHYGVNRETERLDYDAIRELALQHRPKLIICGYSAYPRTIDFAKFREIADEVGAYLLADMAHIAGLVAAGLHPSPIPHCDVVTTTTHKTL-------------RGPR-GGLILTR-----DAELGKKLDKSVFPGTQGGPLEHVIAAKAVAFGEALRP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 84/207 (40.58%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ +L PGD +GL+ GGHLSHG V+++ + + + Y V TG +DY+++EE A+ +PK+++ GGS+Y R+WDY R R+IADK GA+LM DMAH +GLIAA L +P +Y IVTSTTHK+L + P + P S + ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANAAVFFAVLNPGDTFLGLNLSHGGHLSHG------SPVNSSGVLYHATEYNVKEDTGRVDYDQMEEVALREKPKLIVGGGSAYSRDWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGIILLGKDFENPWGKKTPKGEIKKMS-----QLLDSAVFPGIQGGPLEHVIAAKAVAFGEALEP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPH (Serine hydroxymethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV LL PGD MG+ P GGHL+HG KV+ + + S Y V+ TG IDY+ LE+ A+ ++PK++I G S+Y R D+ RFR+IADK GA LM D+AH++GL+A SP Y D+VT+TTHK+L + PR I N + E+++N +V P +QGGP + IAA A+A + P Sbjct: 101 ANAAVMMALLSPGDTFMGMALPHGGHLTHG------SKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTL-------------RGPRGGLILCK-----ENEEIEKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPC (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Corby) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV LL PGD MG+ P GGHL+HG KV+ + + S Y V+ TG IDY+ LE+ A+ ++PK++I G S+Y R D+ RFR+IADK GA LM D+AH++GL+A SP Y D+VT+TTHK+L + PR I N + E+++N +V P +QGGP + IAA A+A + P Sbjct: 101 ANAAVMMALLSPGDTFMGMALPHGGHLTHG------SKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTL-------------RGPRGGLILCK-----ENEEIEKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLP 282 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |