CX309122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRL1_CAVPO (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Cavia porcellus GN=GABARAPL1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.315e-21 Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 ++DK+KYLVP+DLTVGQF +++RKRI L PE A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 43 DLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.315e-21 Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 ++DK+KYLVP+DLTVGQF +++RKRI L PE A+F FV N +PPT+A M +YE+N +ED FLY+ YS E+ +G Sbjct: 43 DLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus GN=Gabarap PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.737e-21 Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 ++DKKKYLVP+DLTVGQF +++RKRI L E A+F FV N++PPT+A M +Y+E+ +ED FLY+ YS E+ +G+ Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus GN=GABARAP PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.737e-21 Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 ++DKKKYLVP+DLTVGQF +++RKRI L E A+F FV N++PPT+A M +Y+E+ +ED FLY+ YS E+ +G+ Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus GN=Gabarap PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.737e-21 Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 ++DKKKYLVP+DLTVGQF +++RKRI L E A+F FV N++PPT+A M +Y+E+ +ED FLY+ YS E+ +G+ Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens GN=GABARAP PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.737e-21 Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 ++DKKKYLVP+DLTVGQF +++RKRI L E A+F FV N++PPT+A M +Y+E+ +ED FLY+ YS E+ +G+ Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus GN=GABARAP PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.737e-21 Identity = 42/75 (56.00%), Postives = 60/75 (80.00%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFGI 227 ++DKKKYLVP+DLTVGQF +++RKRI L E A+F FV N++PPT+A M +Y+E+ +ED FLY+ YS E+ +G+ Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: LGG1_CAEEL (Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.728e-20 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 ++DKKKYLVP+DLTVGQF +++RKRI+L PE A+F FV N++P T M +Y+++ +ED FLY+ YS E+ +G Sbjct: 43 DLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYG 116
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.659e-19 Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 ++D++KYLVP+DLT GQF ++RKRI L PE A+F FV N +PPT+A M +YE++ +ED FLY+ YS E+ +G Sbjct: 43 DLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116
BLAST of CX309122 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.697e-19 Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 3 EIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENRDEDGFLYMTYSGENTFG 224 +++K KYLVP D+TVG F++++ KR++L P KA+F+FV N LP TA+ M ++Y ++EDGFLYM YS E TFG Sbjct: 46 DMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119 The following BLAST results are available for this feature:
BLAST of CX309122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309122 ID=CX309122; Name=CX309122; organism=Citrus clementina; type=EST; length=435bpback to top |