DY256608

Overview
NameDY256608
Unique NameDY256608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256608 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 3
Query:    9 ALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFKEGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRR 452
            A A+P  G+I+  DI+ +    G P  Q+AGV   ID + G A   L +L ++    G FD VFVDADK  Y++Y+++ + LV+ GG++  DNTL+ G  VA P AD  + +     +V+ LN  L  D R++I  L++ADG+TL RR
Sbjct:   79 ARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGR-VADPAADDPDTV-----AVRTLNDLLRDDERVDIALLTVADGITLARR 219          
BLAST of DY256608 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.666e-20
Identity = 54/151 (35.76%), Postives = 86/151 (56.95%), Query Frame = 3
Query:    3 ATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFKEGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 455
            A ALA+P DG+++  ++  +  E G P+ ++A   HKID +  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GG++     LW G V+  P  D+        + V+ LN+ +  D R+ I  L + DG+TL  +I
Sbjct:  119 ALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEA-GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVA------AECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 262          
BLAST of DY256608 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.968e-17
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 3
Query:    3 ATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFKEGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 455
            A ALA+P+ G+++  ++  E  + G P+ ++A V  KID +  PAL  LD+L+   +  GTFD   VDADK N   Y++R ++L++ GGV+     LW G V+ QP      +     + V+ LN+ +  D R+ I  L + DG++L  +I
Sbjct:  119 ALALALPEAGRVVTCEVDAEPPKLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGEA-GTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVL-QPQPRNKTV-----ECVRNLNERILRDARVYISLLPLDDGLSLAFKI 262          
The following BLAST results are available for this feature:
BLAST of DY256608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY1.337e-2040.54O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CMTD1_HUMAN8.666e-2035.76Catechol-O-methyltransferase domain-containing pro... [more]
CMTD1_MOUSE8.968e-1735.10Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1AC02ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256608 ID=DY256608; Name=DY256608; organism=Citrus clementina; type=EST; length=570bp
TAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGCCCTGGAC
ATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAAAAGCTGG
TGTTGCCCACAAGATTGATTTCAAAGAAGGCCCTGCTCTTCCTCTTCTTG
ATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTTCGTCTTT
GTTGATGCTGACAAGAATAACTACATTAATTACCACAAGAGGCTTATTGA
GCTTGTGAAGGTTGGGGGAGTGATTGGCTACGACAACACCTTGTGGGGTG
GATCTGTGGTGGCACAACCTGATGCCGACCTGGATGAGCTAATCTTAGGC
TGGAGGGATTCTGTGCAGGAACTCAACAAGGCCCTGGCCGTTGATCCAAG
GATTGAGATTTGCCAGCTCTCCATTGCTGATGGGGTTACATTATGTCGTC
GCATTGGCTGATCCTCTCAATTTTCACTCACGAGACTGGTTGTGTCGTAA
CTTTTAAACTATACTATGTGTGGTTATGACAGTAAAATCCACAAATAAAT
TAGACCGATGAGTGTTTGGA
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