DY256650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-14 Identity = 64/196 (32.65%), Postives = 85/196 (43.37%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S S+ TQ++LMG VE R P + V + YPGG FDPL LA D E+ LKV E+K+ RLAM +M F+ +A Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAG--GPLGEIV------------------DPLYPGGS-FDPLGLA---------EDPERSAELKVKELKNGRLAMFSMFGFFVQA 230
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14 Identity = 63/197 (31.98%), Postives = 85/197 (43.15%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R P + V + YPGG FDPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFAELKVKELKNGRLAMFSMFGFFVQA 234
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14 Identity = 63/197 (31.98%), Postives = 85/197 (43.15%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R P + V + YPGG FDPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFAELKVKELKNGRLAMFSMFGFFVQA 235
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 63/196 (32.14%), Postives = 82/196 (41.84%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P I S ++ TQ++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQA 229
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 63/197 (31.98%), Postives = 86/197 (43.65%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R V P ++ + YPGG FDPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-VAGNGPLGEAEDLL------------------YPGGS-FDPLGLA---------TDPEAFAELKVKELKNGRLAMFSMFGFFVQA 233
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 63/197 (31.98%), Postives = 86/197 (43.65%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R V P ++ + YPGG FDPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-VAGNGPLGEAEDLL------------------YPGGS-FDPLGLA---------TDPEAFAELKVKELKNGRLAMFSMFGFFVQA 233
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 63/196 (32.14%), Postives = 82/196 (41.84%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R E + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR-------------------VAGEGPLGEAEDLLYPGGS-FDPLGLA---------TDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14 Identity = 63/196 (32.14%), Postives = 84/196 (42.86%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AGA +P + S ++ TQ++LMG +E R P + ++ YPGG F DPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG--GPLGEGLDPL------------------YPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14 Identity = 62/197 (31.47%), Postives = 82/197 (41.62%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IHGRWAM +G G + WF+ G+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------DDAEAFAELKVKEIKNGRLAMFSMFGFFVQA 230
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.832e-14 Identity = 63/196 (32.14%), Postives = 86/196 (43.88%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P I S ++ +Q++LMG+VE R P + ++ + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGG--GPLGEGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 203 The following BLAST results are available for this feature:
BLAST of DY256650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256650 ID=DY256650; Name=DY256650; organism=Citrus clementina; type=EST; length=928bpback to top |