DY256650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.861e-13 Identity = 76/264 (28.79%), Postives = 100/264 (37.88%), Query Frame = 2 Query: 98 MAAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTXXXXXXXXXXLPPKKSWI--PAVKGGGNLIN--PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 MAAAT + +N SQ + G + T + W VK G P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQ--ITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.861e-13 Identity = 62/197 (31.47%), Postives = 82/197 (41.62%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.861e-13 Identity = 61/196 (31.12%), Postives = 81/196 (41.33%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 56 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQA 221
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.736e-13 Identity = 62/196 (31.63%), Postives = 84/196 (42.86%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G + A +G+ WF+AG+ +P + S ++ Q++LMG +E R A + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYR--------------------VAGGPLGEVTDPLYPGGSF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.736e-13 Identity = 63/196 (32.14%), Postives = 83/196 (42.35%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG VE R P + V + YPGG FDPL LA D E LKV E+K RLAM++M F+ +A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLA---------DDPEAFGELKVKELKKGRLAMLSMFGFFVQA 231
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13 Identity = 62/196 (31.63%), Postives = 85/196 (43.37%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P I S ++ +Q++LMG +E R P + ++ + YPGG F DPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGG--GPLGEGLD------------------KIYPGGAF-DPLGLAD---------DPEAFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13 Identity = 62/197 (31.47%), Postives = 83/197 (42.13%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+AG+ +P + S ++ TQ++LMG VE R P + V + YPGG FDPL LA E LKV E+K+ RLAM +M F+ A Sbjct: 28 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVV------------------DPLYPGGS-FDPLGLAEV---------PEAFAELKVKELKNGRLAMFSMFGFFVPA 194
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13 Identity = 62/196 (31.63%), Postives = 83/196 (42.35%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G PGDYG+D GL DP RE ++IH RWAM +G + A +G+ WF+AGA P I S ++ Q++LMG +E R A + YPGG F DPL LA D + +KV EIK+ RLAM +M F+ +A Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--------------------VAGGPLGEVTDPIYPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRLAMFSMFGFFVQA 244
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13 Identity = 64/196 (32.65%), Postives = 83/196 (42.35%), Query Frame = 2 Query: 290 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 P +L G P DYG+D GL DP RE ++IH RWAM +G + A +GI WF+AGA +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of DY256650 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13 Identity = 61/197 (30.96%), Postives = 81/197 (41.12%), Query Frame = 2 Query: 287 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAKLIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 820 +P +L G PGDYG+D GL DP RE ++IH RWAM +G G + WF+ G+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGEPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233 The following BLAST results are available for this feature:
BLAST of DY256650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256650 ID=DY256650; Name=DY256650; organism=Citrus clementina; type=EST; length=928bpback to top |