DY256661

Overview
NameDY256661
Unique NameDY256661
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1020
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.734e-28
Identity = 68/213 (31.92%), Postives = 119/213 (55.87%), Query Frame = 1
Query:   70 SEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVV-NSVQERLSVATVYSVRYDGEVYPASSLI----SEKTPPLFRRVRIEEYFR 684
            +E   +DW   F +  LP           L    ++ ++ ++ +L+ LAE L+  + E L ++   +++ F   +    G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG WI V P+  A +VN+GD LE+ITNG Y+S+ HR +   S   R+S+A+ Y+   D  +YPA +L+     E+   ++ +   E+Y +
Sbjct:   79 AEVNDMDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMK 289          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 6.183e-28
Identity = 72/219 (32.88%), Postives = 114/219 (52.05%), Query Frame = 1
Query:   91 WADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVY--SVRYDGEVY-PASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 738
            W D       P     P    + P    E+L  +S ++K L   L+  + E L +    ++++ +        NYYPPCPQPE  MG   H+D   +TILLQ +++ GLQV     W+ V P P + +VNIGD L++++N  Y S+EHRA+ N+V  R+S+   +  S     ++Y P + L+SE  PP +R   ++++    + R L G S L   +I
Sbjct:  150 WRDTIFCYMAP----NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ-DDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.055e-27
Identity = 79/251 (31.47%), Postives = 132/251 (52.59%), Query Frame = 1
Query:    4 EEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKD-GK-WIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYAREL---RGKSQLDSLRIQ 741
            EEK ++    G   GF  +  +  E   DW ++ +  + P   R    +P  P       + YS +L  LA  L+  + E + ++ E + +   +  Q + +N+YP CP+P+  +GL  H+D   +T+LLQ ++V GLQ  KD GK WI V P+  AF+VN+GD    ++NG +++ +H+AVVNS   RLS+AT  +   +  VYP      EK+  +   +   E +R + +++L   R K Q    ++Q
Sbjct:  101 EEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKS-IMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQ 349          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.377e-27
Identity = 74/221 (33.48%), Postives = 111/221 (50.23%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLR-------ETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKT 642
            + EK++  ++ G+  G+  +F      KL W +  S        R   +      +L        +  + Y   + +L+  ++  +G  L +K +  REFFE     MR+NYYPPC +P+  +G  PH D  +LTIL Q + V GLQV  + +W  + P P AF+VNIGDT   ++N  Y+S  HRAVVNS  ER S+A     + D  V P   L+   T
Sbjct:  120 LSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSIT 339          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.836e-27
Identity = 72/215 (33.49%), Postives = 113/215 (52.56%), Query Frame = 1
Query:   52 GQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRM----NYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFR 684
            G AF    E+   W D+  ++  P+       +P  P  LRE +  Y+   + +A  ++  + E L ++ +    FF   + G R+    NYYPP P P + +GL PH D   +T+LL    V GL++   G WI V P+P++ ++N G  LE++TNG  +++EHRA  N  + RLSVA+      D  V PA   +SE  PP +R + + E+ R
Sbjct:  108 GSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPD----FFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP-GAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYRTLTVGEFKR 314          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 8.928e-27
Identity = 70/243 (28.81%), Postives = 129/243 (53.09%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKT--PPLFRRVRIEEYFRSRYARELRGK 714
            ME++ K       +EG     + +E   +DW   + +  LP         P L    R  ++ ++  L+ LAE L+  + E L ++   +++ F   +    G ++  YPPCP+ + + GL  H+DA  + +L Q ++V GLQ+ KD +WI V P+  + ++N+GD LE+ITNG Y+S+ HR V  +   R+S+A+ Y+   D  +YPA +L+ ++     ++ +   ++Y +   A + + K
Sbjct:   61 MEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLPQSNISE--VPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAK 296          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.989e-26
Identity = 74/237 (31.22%), Postives = 130/237 (54.85%), Query Frame = 1
Query:    1 MEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH-LRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENG-LQG----MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQV-KKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSR 690
            ++ K K  +    + G+G A + S   K  W++ F+++  P+H  RK  L+P       E +E Y   ++ LA  L+      L +++++++    N   QG    +++N+YP CP+P++ MGL+ H+D+  +TIL Q N   GLQV + D  W+   P+P + +VN+GD L I+TNG + S+ HRA VN V+ R S+A ++    D  + P   L+     PL+  +  ++Y  ++
Sbjct:  101 VQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQ-NNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVDPLQSPLYPSLTWKQYLATK 334          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.871e-26
Identity = 82/257 (31.91%), Postives = 128/257 (49.81%), Query Frame = 1
Query:    7 EKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 738
            EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++      ++  E     M +N+YP CP P++ +GL  H+D+   T +LQ + V GLQ+ + G  +W+ V  +P A +VN+GD  +I+TNG + S+ HRAVVN   +R+S+          +V P    ++  TP  +R V   EY   R      G S L  + I
Sbjct:  102 EKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAI 354          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.289e-25
Identity = 82/257 (31.91%), Postives = 128/257 (49.81%), Query Frame = 1
Query:    7 EKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYARELRGKSQLDSLRI 738
            EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++      ++  E     M +N+YP CP P++ +GL  H+D+   T +LQ + V GLQ+ + G  +W+ V  +P A +VN+GD  +I+TNG + S+ HRAVVN   +R+S+          +V P    ++  TP  +R V   EY   R      G S L  + I
Sbjct:  102 EKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALA-GTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAI 354          
BLAST of DY256661 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.684e-25
Identity = 70/216 (32.41%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   10 KKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEV-------YSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISE 636
            K+K  ++PG+  G+  +F      KL W +  S      +     +      +L +  E        Y   + +L+  ++  +G  L +  +  R FFE     MR+N+YPPC  P+  +G  PH D ++LTIL Q + V GLQV  D +W  + P P AF+VNIGDT   ++NG ++S  HRAVVN    R S+A     + D  V P S ++ +
Sbjct:  121 KQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQ-DHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEK 335          
The following BLAST results are available for this feature:
BLAST of DY256661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO1_CUCME4.734e-2831.921-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH3_SOLLC6.183e-2832.881-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_PETHY1.055e-2731.47Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
GAOX1_ARATH1.377e-2733.48Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
IDS2_HORVU6.836e-2733.49Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO_DIOKA8.928e-2728.811-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G3OX2_ARATH1.989e-2631.22Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G3O23_WHEAT9.871e-2631.91Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT1.289e-2531.91Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
GAOX2_ARATH1.684e-2532.41Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1BE10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256661 ID=DY256661; Name=DY256661; organism=Citrus clementina; type=EST; length=1020bp
ATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGGATT
TGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTGACC
TTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTATTT
CCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAATGGA
ATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGTTAA
ATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAAGGA
ATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTATGGG
CCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAACTTA
ATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCTGTT
ACCCCACTCCCGGATGCTTTCATTGTCAACATTGGAGACACATTGGAGAT
TATAACCAATGGGACATACCGTAGCATTGAGCATCGTGCAGTTGTAAACT
CTGTACAGGAAAGACTTTCCGTTGCCACAGTTTACTCAGTGAGATATGAT
GGTGAAGTATATCCTGCCTCCAGTTTGATCTCTGAAAAAACTCCTCCTTT
GTTTAGAAGAGTGAGAATTGAAGAATACTTTAGGAGCCGGTATGCTCGTG
AGCTTAGGGGAAAATCTCAGCTGGATTCCCTGAGAATTCAACATGGTCAA
GGCTAGTATAAGTTTATTTCGGATAACTAAAGAGTTTGGTACAAAAACTC
TGAAGGACCTTGCTATTGAGATTGTGTGTGGAACTGAAAATAAAAAATAA
GTTCTATGATTACTGTGGTATAACCTGCTATGCTGGGATCGTTGTGTAAC
TCCATTCTTTGAGATACTGGATAGACCATGTAAAGATTCTTAAAAATTGC
AAACTTTTGCCTGGAATCCTTCGATGAAAAATGGTGGGTGTTAAATCAAA
TCATTTATTTTCTTTTTTTT
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