DY256737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.997e-42 Identity = 80/137 (58.39%), Postives = 108/137 (78.83%), Query Frame = 2 Query: 2 SELMALMMSGDSGISAFPEED-NIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE-EYRKMVEKLYK 406 SELM+LMMS GISAFP+ D N+ W GTI G DT +EG ++++S+SFP +YP+ PP + F + +HPNVD+ GNICLDIL+DKWS+ Y+V+TILLS+QSLLGEPN +SPLN+QAA+LWS EY++++ + YK Sbjct: 35 SELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYK 171
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.777e-37 Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 2 SELMALMMSGDSGISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKLYK 406 +EL+ L+ S ISAFP +DN + W G I G KDT + G ++++SL FP +YPF PP +KF + +HPNVD GNICLDIL++KWS+ Y+V TILLS+QSLLGEPN SPLN+ AA+LW ++ EEYRK V Y+ Sbjct: 15 NELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACYE 151
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.258e-31 Identity = 67/123 (54.47%), Postives = 85/123 (69.11%), Query Frame = 2 Query: 35 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 +G+S P EDNI W+ I G ++T FE ++LSL F +YP KPP VKF + FHPNV G+ICLDILQ++WS YDV IL SIQSLL EPN +SP NS AAQL+ N+ EY K V+++ Sbjct: 22 AGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 35 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 +G+S P E+NI W I G + T FE ++L++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 22 AGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.048e-29 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 35 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 +G+S P E+NI W I G + T FE ++L++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 22 AGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.049e-29 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 2 Query: 35 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKL 400 +GIS P+++NI W I G DT ++G ++LSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP NS+AA+++S N+ EY + V ++ Sbjct: 22 AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREV 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 38 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 38 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 38 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 38 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 400 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144 The following BLAST results are available for this feature:
BLAST of DY256737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256737 ID=DY256737; Name=DY256737; organism=Citrus clementina; type=EST; length=606bpback to top |