DY256737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.387e-12 Identity = 41/141 (29.08%), Postives = 70/141 (49.65%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 415 EL + + GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ + + + +M+ +++ P+ Sbjct: 22 ELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11 Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 158 YPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 352 YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ T++ + L EPN PLN AA Sbjct: 88 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAA 152
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 62 DNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGC-FHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 352 DN+ W + G+ T++ Y+L + FP YP + P+V F + HP++ G+ICLDIL D WS A V ++ +SI S+L SSP + A Sbjct: 41 DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS----SSPAKQRPA 134
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11 Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 ELMALMMSGDSGISAFPE--EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKF--ETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLL 310 EL+AL +G++ ++ I W ++G++ TV+EG +++L F + YPF+ P+V F E HP+V G+ICL IL + WS A V+++ LSI S+L Sbjct: 11 ELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISML 116
BLAST of DY256737 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 41 ISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFET--GCFHPNVDIYGNICL---DILQDKWSSAYDVRTILLSIQSLL 310 I A P EDNI W I G DT ++G +Y +L+FP+DYP+KPP ++ T G F PN +CL D D W+ + V TIL + S + Sbjct: 25 ILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTILNGLLSFM 115 The following BLAST results are available for this feature:
BLAST of DY256737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256737 ID=DY256737; Name=DY256737; organism=Citrus clementina; type=EST; length=606bpback to top |