DY256739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256739 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.710e-12 Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 91 NILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV--GDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEKN 501 ++LVTG AGF+G+HC+L L G V+ DN ++ ++ R + EL +K + + GDL + L KLF F ++H A V ++++P Y +N+ G +NL + N + +V++SS+++YG +N Sbjct: 113 SVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQ----ELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTEN 248
BLAST of DY256739 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 1.560e-11 Identity = 38/137 (27.74%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 88 KNILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPE 495 KN+ VTG G +G++ +L+ G V + H VP++ +L E KK+ G L + +++ + D V H A V + ++P F+ N++GT N+ +A K+ K+++ +SS YG E Sbjct: 7 KNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDH--VPQS-----NLYQGEHIKKMNIVRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQE 136 HSP 2 Score: 33.8834 bits (76), Expect = 1.560e-11 Identity = 39/155 (25.16%), Postives = 61/155 (39.35%), Query Frame = 2 Query: 494 KKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLADGHICALKKLFTSENIGCIAYNLGNGKGISVL*MVATFEKAFGKEN 955 + +P E+ P +PY +K + I+ Y PV G L N ++P IQ V G PE+ DG+ VRDY ++ D ++ +K+ N+ A+N N ++VL +V EK K N Sbjct: 136 ENLPYDENMPLQGKHPYDVSKSCADLIS----------HTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIR--------SDGTFVRDYFYIEDAVQAYLLLAEKM-EENNLAGEAFNFSNEIQLTVLELV---EKILKKMN 268
BLAST of DY256739 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.630e-11 Identity = 42/149 (28.19%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 70 LAMASEKNILVTGGAGFIGTHCALQLLHG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA-MAKYNCKKLVFSSSATIYGQPEKNTL 507 +A + KNIL+TG AGFI +H A +L+ +K+V++D L + +K+L + + +F GD+ + D ++ L ++ D ++HF A V S + F + NN+ GT L +A ++ + S+ +YG+ +++ L Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKL-----DYCSNLKNLNPSKHSPNFKFVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAL 144
BLAST of DY256739 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.630e-11 Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 91 NILVTGGAGFIGTHCALQLLHGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFSSQKFDAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEK 498 ++LVTG GF+G+H +L L G VV +DN +N ++ R + L+ + F V GDL + L KLF F V+H A V ++++P Y +N+ G +NL + N + +V++SS+++YG EK Sbjct: 89 SVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSL---LSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEK 223 The following BLAST results are available for this feature:
BLAST of DY256739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256739 ID=DY256739; Name=DY256739; organism=Citrus clementina; type=EST; length=1303bpback to top |