DY256745

Overview
NameDY256745
Unique NameDY256745
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.028e-12
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  433 ILDDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS------HPIERSTDNFEHILNQMQIYTSY*FTPQLASSSKGLD 717
            IL+D + WRKYGQK + N KFPRSY+RCTH   QGC   KQVQ++  +  +   TY G H+       P  ++ D+ + I    + + S    P L++S K  D
Sbjct:  118 ILEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPKSKTCDHHDEIFMDSEDHKS----PSLSTSMKEED 217          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.649e-12
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  436 LDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDE-GVVVTTYEGMHSHPI 615
            ++DG +WRKYGQK  K N  PR+YYRC+    C V+KQVQR  ++E    +TTYEG H HP+
Sbjct:  202 INDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPL 263          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.518e-12
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  442 DGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSH 609
            DGY+WRKYGQK  ++N  PR+Y+RC+    C VKK+VQR  +D   +V TYEG H+H
Sbjct:  147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNH 203          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.518e-12
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  436 LDDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS 606
            LDDG+ WRKYGQK +   KFPR YYRCT+   QGC   KQVQR  +++ ++  +Y G+HS
Sbjct:  112 LDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHS 171          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.518e-12
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query:  430 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 612
            DI  D Y WRKYGQK +K + +PR YY+C+  +GC  +K V+R  +D  +++ TYE  H+HP
Sbjct:  310 DIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHP 371          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.901e-12
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 1
Query:  442 DGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSH 609
            DG++WRKYGQK  ++N  PR+Y+RC+    C VKK+VQR  +D  ++V TYEG H+H
Sbjct:  177 DGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH 233          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.706e-12
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 1
Query:  439 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQ---GCNVKKQVQRLTKDEGVVVTTYEGMHS 606
            DD + WRKYGQK +  ++FPR+YYRCTHQ    C  KKQVQRL  D      TY G H+
Sbjct:  173 DDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHT 231          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.315e-11
Identity = 29/65 (44.62%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  421 SQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 612
            +Q ++  D + WRKYGQK +K + +PR+YYRC + +GC  +KQV+R   D  + + TY G H+HP
Sbjct:  159 TQENLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHP 223          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.315e-11
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1
Query:  406 AFQTRSQVDIL-DDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 612
            A  +RS  +++  D + WRKYGQK +K + FPR YYRC + +GC+ +KQV+R   D  ++V TY   H+HP
Sbjct:  205 AMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHP 275          
BLAST of DY256745 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.242e-11
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 1
Query:  430 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDNFEH 642
            DI  D + WRKYGQK +K +  PR YY+C+  +GC  +K V+R   D  +++ TYEG H+H +   T    H
Sbjct:  278 DIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHALVLETTTMNH 349          
The following BLAST results are available for this feature:
BLAST of DY256745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
WRK70_ARATH2.028e-1239.42Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK36_ARATH2.649e-1253.23Probable WRKY transcription factor 36 OS=Arabidops... [more]
WRK60_ARATH4.518e-1254.39Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK30_ARATH4.518e-1253.33Probable WRKY transcription factor 30 OS=Arabidops... [more]
WRK21_ARATH4.518e-1246.77Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK18_ARATH5.901e-1252.63WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK55_ARATH7.706e-1254.24WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK27_ARATH1.315e-1144.62Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK14_ARATH1.315e-1145.07Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRKY7_ARATH2.242e-1141.67Probable WRKY transcription factor 7 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1DF10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256745 ID=DY256745; Name=DY256745; organism=Citrus clementina; type=EST; length=981bp
GCGGGGGAATCTGCCCACCATATATATCTCTCCCTCCCTCCCTCCCTCTC
TCTCTCTCTCTCTCTATCTATCTAGATAAAGTCTCAAATCAAAATGGAGA
ATTACCAAACATATTTTCCAACAGCGGCGGCGGCGGCAGCGGCAGCTTGC
TCATCTTCAGCGTCATTAGATAGAATGAATAATAGTAATAGTAATGCCGA
GTTCCAAGGCTACAACGACCACAAGCCAAGTGGGTTCTTGGGATTATTGT
CGGGGATGGAAGTTAATCCGGCAGCGGCAAGCTTGAATGGGGACGGCAAC
ATTAATTCTGAGAATAAAAGCTTTACTAATAATATAGGGTCTGAAAACGG
AGAGAAAATGGGAAAGATTAAAAAGGGAGAGAAGAAGGTGAGAAAGCCAA
GATATGCTTTTCAAACACGAAGCCAAGTTGATATACTTGATGATGGCTAT
AGATGGCGAAAGTATGGCCAAAAAGCTGTTAAAAACAACAAGTTTCCAAG
AAGCTACTACCGATGCACGCATCAAGGCTGCAATGTGAAGAAGCAAGTTC
AACGACTAACCAAAGATGAAGGAGTTGTGGTGACAACTTACGAAGGAATG
CATTCGCATCCCATCGAGAGATCAACTGATAACTTCGAACACATCTTGAA
CCAGATGCAAATCTACACTTCTTATTAATTCACTCCTCAACTAGCAAGCA
GCAGTAAAGGGCTAGATACTTCTTAATACGTTGTAAATTATCTAGCATCC
ATAAACTTGAACCCTCGAAATAAAATTTCCAGAGCACTGGGCAGGATACT
TCTCTAGTATAATTTGAACCCATGTTGTATTTTTATGGCAATGCCTTTTA
GTTTGTTGTACTGTGTGCAGTCATTAGAATTTAGAAACAAAACTTGCCTG
CATTGGTGAATTTGTTCATTAATTTTGTTCTCTTTTTATTCCAATTTTTT
TTTTTTTTAATCCAACTTCCATTTTCCAGCC
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