DY256756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_DICTD (Triosephosphate isomerase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.326e-28 Identity = 86/229 (37.55%), Postives = 115/229 (50.22%), Query Frame = 3 Query: 54 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGL-VKSSLRPD--FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 R+ + NWK T E + S + E + F L V + L D + AQN + +K GA+TGEIS ML +L+ +VI+GHSERR +E+N+ + K+ A L I CVGE E+RE G T +V+ Q K + IV+AYEPVWAIGTG A A EV +R+ + E++ RI YGGSVN N KE AQ E Sbjct: 2 RRKIIAANWKMYKTCAETE---SFIKEFKELSKGYEEKEIVICPPFTSLYVANKLLEDTPIKLGAQNMFWEKEGAYTGEISPIMLKDLNCSYVIIGHSERRQYFSETNDMINKKLKSAFEYELIPIFCVGEKWEEREKGKTEEVITEQVKKGLQGLEKEKVEKIVIAYEPVWAIGTGHSAKGEDANEVAKLIRRIISEIYDEEVSQKVRIQYGGSVNPQNIKEFLAQSE 227
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.184e-28 Identity = 83/229 (36.24%), Postives = 109/229 (47.60%), Query Frame = 3 Query: 54 RKFFVGGNWKCNGTTEEVKKIVS----VLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 R + GNWK + T E ++ + L L +V R D V AQN + GAFTGEIS ML L + +VI+GHSERR E++E V ++A A GL I CVGE+ +QRE G T + Q + N+V+AYEP+WAIGTG+ +A V +R+ L P I+YGGSV N EL AQPE Sbjct: 2 RPILIAGNWKMHKTQAEAREFLRELGLALRSSPSGSASQRQIILCVPFTDLAVVAEQSRGSDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGNAQLP-------ILYGGSVKAGNIDELMAQPE 222 HSP 2 Score: 22.3274 bits (46), Expect = 5.184e-28 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 727 VDGFLVGGAFFNPE 768 +DG LVGGA +P+ Sbjct: 223 IDGVLVGGASLDPQ 236
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_RHOSR (Triosephosphate isomerase OS=Rhodococcus sp. (strain RHA1) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.650e-28 Identity = 82/232 (35.34%), Postives = 113/232 (48.71%), Query Frame = 3 Query: 48 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 M RK + GNWK N E V+KI L + + + AQ+ GA+TGEIS ML L +V++GHSERR + E N+ V K AL G+ I C+GE L+ REAG + Q + +S + +V+AYEPVWAIGTG+VA+ AQEV +R L S ++A+ R++YGGSVN N E+ Q + Sbjct: 1 MARKPLIAGNWKMNLNHLEAIALVQKIAFSLPAKYFDKVDVTVIPPFTDIRSVQTLVEGDKLLLTYGAQDVSAHDSGAYTGEISGSMLAKLGCTFVVVGHSERRTLHCEDNDTVLAKTKAALKNGITPIVCIGEGLDVREAGEHVSYNVEQLRGSLAGLSGEDIAKVVIAYEPVWAIGTGRVASAANAQEVCAAIRATLGELASQDVASGVRVLYGGSVNAKNVGEIVGQTD 232
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_ONYPE (Triosephosphate isomerase OS=Onion yellows phytoplasma GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.650e-28 Identity = 80/221 (36.20%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 66 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQP 722 + GNWK +E + + ++ Q L + + V AQN + + GAFTGE+S + L++L + V+LGHSERR E+++ V K+ AL L CVGE+L +E T + Q I V + NI++AYEPVWAIGTGK ATP A +V ++R + A S + + A RIIYGGSV+ AN K + QP Sbjct: 10 IAGNWKMYKCKDEALEFIQKVSL-QVPDQTQVQTLIFPQLTLLDSLAQLQGTNLQVGAQNMFYESEGAFTGEVSPQNLLSLGVKHVLLGHSERRTFFGETDQTVNLKLLSALKHKLVPTVCVGESLLTKENNQTQVFLDQQLTNIFAGVPEEALQNIIIAYEPVWAIGTGKSATPQDANKVIEQIRDKVTALYSSQASCAMRIIYGGSVSVANIKTILEQP 229
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_BORHD (Triosephosphate isomerase OS=Borrelia hermsii (strain DAH) GN=tpiA PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.650e-28 Identity = 81/219 (36.99%), Postives = 113/219 (51.60%), Query Frame = 3 Query: 54 RKFFVGGNWKCNGTTEEVKKIVSVLNEG-QXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLK-VIACVGETLEQREAGSTMDVVAAQTKA--IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGAN 698 RK F+ GNWK + T+ E + + +G Q + + + + + AQN + GA T EIS ML+ + +VILGHSE R L +++E + K+ L K +I C+GETL +RE T+DVV Q + ++ S I+LAYEPVWAIGTGK AT +AQEVH +R + + S A I YGGSVN N Sbjct: 2 RKMFLAGNWKMHYTSVEAAGVAKQIVDGVQNINDDVVIMITPAFTSLCKVCEVTKGSNVLLGAQNMSYENSGARTSEISPSMLLEFGVDYVILGHSECRTYLGDTDEVINKKILAGLKHPFKYLILCIGETLSERENNKTLDVVLNQIRRGLMSVSESDLKRIILAYEPVWAIGTGKTATKEEAQEVHRAIRLEIESLYSTSAADDIIIQYGGSVNVDN 220
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_SACEN (Triosephosphate isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.741e-28 Identity = 88/233 (37.77%), Postives = 114/233 (48.93%), Query Frame = 3 Query: 48 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAG-----STMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQ 719 M R+ + GNWK N E V+KI L E + + + AQ+ + GA+TGE+S ML L +V++GHSERR E++E V KV L G+ I CVGE LE REAG ST ++ A +++ +V+AYEPVWAIGTGKVAT AQEV LR L EIA R++YGGSV +N EL Q Sbjct: 1 MARQPLIAGNWKMNLNHLEAIALVQKIAFSLPEKYFAKVEVAVIPPFTDIRSVQTLIDGDKLLLKHGAQDVSEHESGAYTGEVSGPMLAKLGCSYVVVGHSERREHHAETDEVVNRKVRAVLKHGMSPILCVGEPLEVREAGGHVEHSTTQLINALKGLKTEQIRQ---VVVAYEPVWAIGTGKVATAADAQEVCAALRTALADKYGKEIADEVRVLYGGSVKSSNIGELIGQ 230 HSP 2 Score: 21.1718 bits (43), Expect = 6.741e-28 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 724 NVDGFLVGGAFFN 762 +VDG LVGGA N Sbjct: 232 DVDGALVGGASLN 244
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_MYCFL (Triosephosphate isomerase OS=Mycoplasma flocculare GN=tpiA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.754e-28 Identity = 83/225 (36.89%), Postives = 112/225 (49.78%), Query Frame = 3 Query: 57 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQ 719 K + GNWK N T E + + + + L L+ +S VAAQN GAFTGEISA+ML +L + +VI+GHSERR I E E + +K+ A L + CVGE+L + EA T V+ Q + V ++ ++AYEP+WAIGTGK AT A++V K + N I R+IYGGSVN N EL Q Sbjct: 2 KKIIIGNWKMNKTVHETRDFIQKFDIFYSKNLGKIKDNLDFAIAPSFTSLALISTSKIDKLKVAAQNLSQFDSGAFTGEISAKMLQDLAVHYVIIGHSERREIFKEIGEDLTNKILQAQKYNLIPVFCVGESLSEFEANETEKVIIGQINEVKS-VLNFEKAIIAYEPIWAIGTGKTATAQIAEQV----CKLIKNNFGKNI----RVIYGGSVNSKNINELLLQ 217 HSP 2 Score: 22.3274 bits (46), Expect = 6.754e-28 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 724 NVDGFLVGGAFFNPE 768 N+DG LVG A +PE Sbjct: 219 NIDGALVGKASLDPE 233
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSS (Triosephosphate isomerase OS=Mycobacterium sp. (strain MCS) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.637e-28 Identity = 82/232 (35.34%), Postives = 114/232 (49.14%), Query Frame = 3 Query: 48 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ + Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQED 232
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSK (Triosephosphate isomerase OS=Mycobacterium sp. (strain KMS) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.637e-28 Identity = 82/232 (35.34%), Postives = 114/232 (49.14%), Query Frame = 3 Query: 48 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ + Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQED 232
BLAST of DY256756 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSJ (Triosephosphate isomerase OS=Mycobacterium sp. (strain JLS) GN=tpiA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 9.637e-28 Identity = 82/232 (35.34%), Postives = 114/232 (49.14%), Query Frame = 3 Query: 48 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPE 725 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA AQEV +R L +SP++AA R++YGGSVN N E+ AQ + Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQED 232 The following BLAST results are available for this feature:
BLAST of DY256756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256756 ID=DY256756; Name=DY256756; organism=Citrus clementina; type=EST; length=960bpback to top |