DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.085e-28
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 1 
Query:  316 QFCTGEYRKG-GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSM 519
            QFCTGE +   G P GYKG +FHR+I +FM Q GDFL GDG+G T I+G K F+DENF  KH  PGLLSM
Sbjct:   46 QFCTGESKTPVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSM 115

HSP 2 Score: 58.5362 bits (140), Expect = 3.085e-28
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 2 
Query:  116 PNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P   NP+VFFD+TIG  P GRI  ELF D+ PKTAENFR
Sbjct:    7 PESGNPLVFFDITIGGEPLGRITFELFKDVVPKTAENFR 45

HSP 3 Score: 68.9366 bits (167), Expect = 5.992e-11
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNR--PKLACTIADCGEM 894
            AN+GPN+NG QFFIT     +LDNKHVVFG+V  +G+ VV+K+E   TG   +  P L   I+ CGEM
Sbjct:  116 ANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVF-EGMDVVKKMEATKTGYRGKDMPNLDVVISQCGEM 182
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.091e-28
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 1 
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF+DENF+ KHTGPG+LSM
Sbjct:   40 CTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSM 107

HSP 2 Score: 58.5362 bits (140), Expect = 3.091e-28
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+TIG  PAGR+ MELFAD  PKTAENFR
Sbjct:    3 NPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFR 37
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.017e-28
Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = 1 
Query:  316 QFCTGEYRKG-GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSM 519
            QFCTGE +   G P GYKG +FHR+I +FM Q GDFL GDG+G T IYG K F DENF+ KH  PGLLSM
Sbjct:   46 QFCTGESKNNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSM 115

HSP 2 Score: 55.8398 bits (133), Expect = 4.017e-28
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 2 
Query:  116 PNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P   NP+VFFD+T+G  P GRI  ELF D+ P+TAENFR
Sbjct:    7 PASGNPLVFFDITLGGEPLGRITFELFKDVVPRTAENFR 45

HSP 3 Score: 72.7886 bits (177), Expect = 4.150e-12
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNR--PKLACTIADCGEM 894
            AN+GPN+NG QFFIT     +LD KHVVFG+V+ DG+ VV+K+EN  TG   +  P L   IA CGEM
Sbjct:  116 ANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVV-DGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.588e-28
Identity = 70/191 (36.65%), Postives = 84/191 (43.98%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMEFV*GEELVHSLFLKILQS*RDVQLF*CGMGKERSREMNNQSVKVRDFYGKEMKLCCLQANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            CTGE  KG    G+K   FHRVI DF+ Q GD  K DG+G  SIYG KF+DENF  KHTGPGLLSM                                 R ++ NN                             QFFIT  K + LD KHVVFG V  DG+  V+KIE+  + P         I +CG++
Sbjct:  961 CTGE--KG---FGFKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSM-------------------------------ANRGQDTNNS----------------------------QFFITLKKAERLDFKHVVFGFV-KDGMDTVKKIESFGS-PKGSVSRRIIITECGQI 1085

HSP 2 Score: 51.9878 bits (123), Expect = 6.588e-28
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP+VFFD+     P GRI MELF++I PKTAENFR
Sbjct:  924 NPVVFFDICADDEPLGRITMELFSNIVPKTAENFR 958
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.942e-27
Identity = 72/191 (37.70%), Postives = 89/191 (46.60%), Query Frame = 1 
Query:  325 TGEYRKG-GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMEFV*GEELVHSLFLKILQS*RDVQLF*CGMGKERSREMNNQSVKVRDFYGKEMKLCCLQANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            TG+   G  L  GY+G  FHR+IK+FMIQ GDF KGDG+G  SIYG KF DENF  KHTGPG+LSM                                         +   RD  G +  +C +                  K  WLDN+HVVFG VL +G+ VV  +ENV T   ++P    TIA  GE+
Sbjct:   82 TGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSM-----------------------------------------ANAGRDTNGSQFFICTV------------------KTAWLDNRHVVFGHVL-EGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212

HSP 2 Score: 38.891 bits (89), Expect = 1.942e-27
Identity = 18/32 (56.25%), Postives = 21/32 (65.62%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FD+  G  P GRI M L+    PKTAENFR
Sbjct:   47 VYFDIEHGGKPLGRIVMGLYGKTVPKTAENFR 78
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.317e-27
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ YKG  FHRVI +FM Q GDF  G+G+G  SIYG+KF DENF  KH G G LSM
Sbjct:   48 CTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSM 115

HSP 2 Score: 61.6178 bits (148), Expect = 3.317e-27
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 2 
Query:  107 VRPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+P +P+NP VFFD+TIG + AG++ MEL+A+  PKTAENFR
Sbjct:    4 VKPTSPENPRVFFDITIGGVEAGKVVMELYANTVPKTAENFR 45
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 7.189e-27
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:  322 CTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSM
Sbjct:   52 CTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM 120

HSP 2 Score: 60.8474 bits (146), Expect = 7.189e-27
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 2 
Query:  110 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P NP NP VFFDV IG    GRI +ELFADI PKTAENFR
Sbjct:    9 KPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFR 49
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 81.6481 bits (200), Expect = 7.189e-27
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:  322 CTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSM
Sbjct:   52 CTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSM 120

HSP 2 Score: 60.8474 bits (146), Expect = 7.189e-27
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 2 
Query:  110 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P NP NP VFFDV IG    GRI +ELFADI PKTAENFR
Sbjct:    9 KPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFR 49
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 9.358e-27
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:  322 CTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSM
Sbjct:   52 CTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM 120

HSP 2 Score: 59.6918 bits (143), Expect = 9.358e-27
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 2 
Query:  110 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P N KNP VFFDV IG    GRI +ELFADI PKTAENFR
Sbjct:    9 KPSNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFR 49
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 9.358e-27
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:  322 CTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   G P+ +KGC FHR+IK FMIQ GDF   +G+G  SIYG KF+DENF  KH   GLLSM
Sbjct:   52 CTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM 120

HSP 2 Score: 59.6918 bits (143), Expect = 9.358e-27
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 2 
Query:  110 RPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P N KNP VFFDV IG    GRI +ELFADI PKTAENFR
Sbjct:    9 KPSNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFR 49
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPIH_GIBZE3.085e-2862.86Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
CYPH_SOLLC3.091e-2863.24Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
PPIH_NEUCR4.017e-2864.29Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
RBP2_BOVIN6.588e-2836.65E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPIB_CRYNE1.942e-2737.70Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIA_DICDI3.317e-2760.29Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPID_HUMAN7.189e-2759.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_BOVIN7.189e-2759.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_RAT9.358e-2759.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_MOUSE9.358e-2759.4240 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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