DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.064e-26
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  +G  G P+ Y+G  FHR+IK+FMIQ GDF  G+G+G  SIYG KF+DENF+ KH  P LLSM
Sbjct:   40 CTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSM 107          

HSP 2 Score: 54.6842 bits (130), Expect = 2.064e-26
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP V+FD+TIG  P GRI  ELF DI PKTAENFR
Sbjct:    3 NPRVYFDITIGNKPEGRIVFELFKDIVPKTAENFR 37          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.102e-26
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ +KG  FHRVI +FM Q GDF KG+G+G  SIYG KF+DENF  KHTGPG+LSM
Sbjct:   41 CTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSM 108          

HSP 2 Score: 52.373 bits (124), Expect = 2.102e-26
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P VFFD+TIG  PAG+I MEL+ D  PKTAENFR
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFR 38          

HSP 3 Score: 69.707 bits (169), Expect = 3.513e-11
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+G N+NG QFFI   K DWLD KHVVFG+V+ +GL VV+ IE + +  + +P     IADCGE+
Sbjct:  109 ANAGANTNGSQFFICTVKTDWLDGKHVVFGQVV-EGLDVVKAIEKIGSS-SGKPTKPVVIADCGEI 172          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.104e-26
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ +KG +FHR+I +FMIQ GDF +G+G+G  SIYG KF DENF  KHTGPG+LSM
Sbjct:   40 CTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSM 107          

HSP 2 Score: 51.2174 bits (121), Expect = 2.104e-26
Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 2
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFD+TI   P GRI MEL+ DI PKTAENFR
Sbjct:    4 PRVFFDITIAGKPTGRIVMELYNDIVPKTAENFR 37          

HSP 3 Score: 72.4034 bits (176), Expect = 5.420e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFF+   K  WLD KHVVFGRV+ +GL +V K+E   +  +  PK  C IADCG++
Sbjct:  108 ANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVV-EGLDIVSKVEGNGSS-SGTPKSECLIADCGQL 171          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-26
Identity = 43/68 (63.24%), Postives = 47/68 (69.12%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ YK   FHRVI  FM Q GDF  G+G+G  SIYG KF DENFI KHTGPG+LSM
Sbjct:   40 CTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSM 107          

HSP 2 Score: 55.0694 bits (131), Expect = 2.104e-26
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+++G  PAGRI MELFAD  P+TAENFR
Sbjct:    3 NPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFR 37          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.565e-26
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ YKG  FHRVI +FM Q GDF  G+G+G  SIYG KF DENFI +HTGPG+LSM
Sbjct:   40 CTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSM 107          

HSP 2 Score: 51.6026 bits (122), Expect = 3.565e-26
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+ I   PAGRI MEL+AD  P+TAENFR
Sbjct:    3 NPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFR 37          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.641e-26
Identity = 44/68 (64.71%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF DENFI KHTGPG+LSM
Sbjct:   41 CTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSM 108          

HSP 2 Score: 50.8322 bits (120), Expect = 4.641e-26
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP V+FD+T+G   AGRI MEL+AD  P+TAENFR
Sbjct:    4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFR 38          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.641e-26
Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF DENF+ KHTGPG+LSM
Sbjct:   40 CTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSM 107          

HSP 2 Score: 51.2174 bits (121), Expect = 4.641e-26
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP V+FD+T+G   AGRI MEL+AD  P+TAENFR
Sbjct:    3 NPKVYFDMTVGDKAAGRIVMELYADTVPETAENFR 37          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.830e-26
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G+ + +KG +FHR+I +FMIQ GDF + +G+G  SIYG+KF DENF  KHTGPG LSM
Sbjct:   58 CTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSM 125          

HSP 2 Score: 55.4546 bits (132), Expect = 7.830e-26
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            + P VFFDV+IG  PAGR+ MELF D+ PKTAENFR
Sbjct:   20 QRPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFR 55          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 7.858e-26
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G  + YKG  FHR+I  FM Q GDF +G+G+G  SIYG KF+DENF  KHTGPG+LSM
Sbjct:   40 CTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSM 107          

HSP 2 Score: 53.5286 bits (127), Expect = 7.858e-26
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+ IG + AGR+ MELFAD+ P+TA NFR
Sbjct:    3 NPKVFFDILIGKMKAGRVVMELFADVTPRTANNFR 37          

HSP 3 Score: 70.4774 bits (171), Expect = 2.060e-11
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM*N 900
            ANSGPN+NG QFFI   K  WLD KHVVFG+V+ DG  VV+ +E+V +   N P     I DCGE+ N
Sbjct:  108 ANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVV-DGYNVVKAMEDVGSDMGN-PSERVVIEDCGELKN 173          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.733e-25
Identity = 66/193 (34.20%), Postives = 87/193 (45.08%), Query Frame = 1
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMEFV*GEELVHSLFLKILQS*RDVQLF*CGMGKERSREMNNQSVKVRDFYGKEMKLCCLQANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            CTGE    K G P+ YKG  FHRVIK+FM+Q GDF  G                      TG G        GE +                           R  N+++  V+   G     C   AN+G N+NG QFFIT A+   L+  H VFG V+ +G  +V+K+EN  T  ++RPK AC I DCG++
Sbjct:   43 CTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHG----------------------TGIG--------GESIY-------------------------GRTFNDENFLVKHKIG-----CLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVV-EGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          

HSP 2 Score: 43.5134 bits (101), Expect = 1.733e-25
Identity = 19/32 (59.38%), Postives = 22/32 (68.75%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            VFF +  G  P GR+  EL+ DI PKTAENFR
Sbjct:    9 VFFQIKQGNTPLGRVVFELYNDIVPKTAENFR 40          
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPID_RHIOR2.064e-2660.29Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
CP19B_ARATH2.102e-2663.24Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYP7_CAEEL2.104e-2661.76Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
CYPH_CATRO2.104e-2663.24Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_LUPLU3.565e-2663.24Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH4.641e-2664.71Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CYPH_BRANA4.641e-2663.24Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CYP1_CAEEL7.830e-2658.82Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CP19C_ARATH7.858e-2660.29Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPID_DICDI1.733e-2534.20Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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