DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.878e-25
Identity = 44/68 (64.71%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ YKG  FHRVIK FMIQ GDF  GDG+G  SIYG+KFDDE F  KH  P LLSM
Sbjct:   47 CTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSM 114

HSP 2 Score: 51.2174 bits (121), Expect = 4.878e-25
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 2 
Query:  119 NPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +P  P V+FD++IG    GRI MEL+AD+ PKTA+NFR
Sbjct:    7 SPARPRVYFDISIGGKSVGRITMELYADLVPKTADNFR 44

HSP 3 Score: 72.4034 bits (176), Expect = 5.420e-12
Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFFIT      LD KHVVFG VL +G  VVR+IEN+ T   +RP     I DCGE+
Sbjct:  115 ANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVL-NGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.916e-25
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE +      GYKG  FHR+IKDFMIQ GDF +G+G+G  SIYG KF+DENF  KHTGPG+LSM
Sbjct:  131 CTGEKK-----YGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSM 191

HSP 2 Score: 44.2838 bits (103), Expect = 4.916e-25
Identity = 31/78 (39.74%), Postives = 37/78 (47.44%), Query Frame = 2 
Query:    2 ASP-KSKPGVACRVKEVREKLMASXXXXXXXSVEWHVRPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            ASP K   GV    K  R   + S        +E   +  N     V+FDV IG   AGRI M LF ++ PKT ENFR
Sbjct:   55 ASPIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVTNK----VYFDVEIGGEVAGRIVMGLFGEVVPKTVENFR 128

HSP 3 Score: 73.559 bits (179), Expect = 2.433e-12
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFFI   K  WLDNKHVVFG+V+ +G+ +VR +E+  T   + PK  C I  CGE+
Sbjct:  192 ANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVI-EGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.478e-25
Identity = 39/68 (57.35%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ YKG  FHRVI +FM Q GDF +G+G+G  SIYG KF DE F+ K   PG+LSM
Sbjct:   40 CTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSM 107

HSP 2 Score: 54.6842 bits (130), Expect = 6.478e-25
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+T+G  PAGRI MEL+A+  PKTAENFR
Sbjct:    3 NPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFR 37
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.431e-25
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ +KG +FHR+I +FMIQ GDF +G+G+G  SIYG KF DENF  KHTGPG+LSM
Sbjct:   40 CTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSM 107

HSP 2 Score: 46.2098 bits (108), Expect = 8.431e-25
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            VFFD+TIG   +GRI MEL+ D+ PKTA NFR
Sbjct:    6 VFFDITIGGKASGRIVMELYDDVVPKTAGNFR 37

HSP 3 Score: 71.2478 bits (173), Expect = 1.207e-11
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFF+   K +WLD KHVVFGRV+ +GL VV+ +E+  +  + +P   C IADCG++
Sbjct:  108 ANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV-EGLDVVKAVESNGS-QSGKPVKDCMIADCGQL 171
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.431e-25
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G P+ +KG  FHRVI DFM Q GDF +G+G+G  SIYG KF DENF  KH  PGLLSM
Sbjct:   39 CTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSM 106

HSP 2 Score: 50.8322 bits (120), Expect = 8.431e-25
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            VFFD+TIG+  AGRI MELF ++ PKTAENFR
Sbjct:    5 VFFDITIGSDTAGRIVMELFDEVTPKTAENFR 36
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.428e-24
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:  322 CTGEYRKGGL--PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   GG   P+ +KG +FHRVI +FM Q GDF  G+G+G  SIYG KF+DENF  KHTGPG+LSM
Sbjct:   40 CTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSM 107

HSP 2 Score: 47.3654 bits (111), Expect = 1.428e-24
Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P V+FD+TI   PAGRI MEL+ D  P+TAENFR
Sbjct:    4 PKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFR 37

HSP 3 Score: 68.9366 bits (167), Expect = 5.992e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+G N+NG QFFI   K DWLD KHVVFG+V+ +GL VV+ IE V +  + +P     +ADCG++
Sbjct:  108 ANAGANTNGSQFFICTVKTDWLDGKHVVFGQVV-EGLDVVKAIEKVGSS-SGKPTKPVVVADCGQL 171
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.432e-24
Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GYKGC FHRVI +FM+Q GDF   +G+G  SIYG+KF DENF  KHTGPG LSM
Sbjct:   40 CTGE--KG---FGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSM 100

HSP 2 Score: 49.2914 bits (116), Expect = 1.432e-24
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFDV+  + P GRI MEL AD+ P+TAENFR
Sbjct:    3 NPKVFFDVSANSKPLGRIVMELRADVVPQTAENFR 37

HSP 3 Score: 75.485 bits (184), Expect = 6.402e-13
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFFIT  KC WLD KHVVFGRV  +G+ VV+ IE++ + PN  P+    I +CG++
Sbjct:  101 ANAGPNTNGSQFFITTIKCSWLDGKHVVFGRV-TEGMDVVQNIESLGS-PNGTPRAKIIIDNCGQL 164
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.867e-24
Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 1 
Query:  316 QFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            Q CTGE+R   +P GYK   FHR+IKDFM Q GDF+  DG+G  SIYG KFDDENF  KH   GLLSM
Sbjct:   24 QLCTGEFRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSM 91

HSP 2 Score: 39.6614 bits (91), Expect = 1.867e-24
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 2 
Query:  167 PAGRIKMELFADIAPKTAENFR 232
            PAGR+K ELF+DI P+T+ENFR
Sbjct:    2 PAGRLKCELFSDIVPRTSENFR 23

HSP 3 Score: 96.2857 bits (238), Expect = 3.505e-19
Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            ANSGP +NGCQFFIT   C +LD KHVVFG+V+ DGLL +RK+ENV TG NNRPK+A  I  CGEM
Sbjct:   92 ANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVV-DGLLTLRKMENVPTGANNRPKMAVRITQCGEM 156
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.095e-24
Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ YKG  FHR+I  FM Q GDF  G+G G  SIYGHKF+DENF  KHTG G+LSM
Sbjct:   43 CTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSM 110

HSP 2 Score: 46.2098 bits (108), Expect = 4.095e-24
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFDV +   P+GR+  +LF+D  PKTAENFR
Sbjct:    7 PKVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFR 40
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.246e-24
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            C   + KG    G+KG  FHR+I  FM Q GDF   +G+G  SIYG KFDDENFI KHTGPGLLSM
Sbjct:  174 CLCTHEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSM 236

HSP 2 Score: 50.0618 bits (118), Expect = 5.246e-24
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRC 235
            NP V+ D+ IG  PAGRI+M L +D+ P TAENFRC
Sbjct:  139 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC 174

HSP 3 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGE 891
            ANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IADCGE
Sbjct:  237 ANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV-TEGLDVLRQIE-ARGSKDGKPKQKVIIADCGE 299
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPID_GIBZE4.878e-2564.71Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CP20C_ARATH4.916e-2565.15Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPH_MAIZE6.478e-2557.35Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CYP3_CAEEL8.431e-2561.76Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPI2_SYNY38.431e-2561.76Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CP18C_ARATH1.428e-2461.76Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
PPIA1_RHIOR1.432e-2465.15Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIH_USTMA1.867e-2463.24Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
CYP5_RHIOR4.095e-2461.76Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
PPIE_PONAB5.246e-2460.61Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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