DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.246e-24
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            C   + KG    G+KG  FHR+I  FM Q GDF   +G+G  SIYG KFDDENFI KHTGPGLLSM
Sbjct:  174 CLCTHEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSM 236

HSP 2 Score: 50.0618 bits (118), Expect = 5.246e-24
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRC 235
            NP V+ D+ IG  PAGRI+M L +D+ P TAENFRC
Sbjct:  139 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC 174

HSP 3 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGE 891
            ANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IADCGE
Sbjct:  237 ANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV-TEGLDVLRQIE-AQGSKDGKPKQKVMIADCGE 299
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.246e-24
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            C   + KG    G+KG  FHR+I  FM Q GDF   +G+G  SIYG KFDDENFI KHTGPGLLSM
Sbjct:  174 CLCTHEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSM 236

HSP 2 Score: 50.0618 bits (118), Expect = 5.246e-24
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRC 235
            NP V+ D+ IG  PAGRI+M L +D+ P TAENFRC
Sbjct:  139 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC 174

HSP 3 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGE 891
            ANSGPN+NG QFF+TC K DWLD KHVVFG V  +GL V+R+IE      + +PK    IADCGE
Sbjct:  237 ANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV-TEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 299
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.246e-24
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            C   + KG    G+KG  FHR+I  FM Q GDF   +G+G  SIYG KFDDENFI KHTGPGLLSM
Sbjct:  174 CLCTHEKG---FGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSM 236

HSP 2 Score: 50.0618 bits (118), Expect = 5.246e-24
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRC 235
            NP V+ D+ IG  PAGRI+M L +D+ P TAENFRC
Sbjct:  139 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC 174

HSP 3 Score: 76.6406 bits (187), Expect = 2.874e-13
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGE 891
            ANSGPN+NG QFF+TC K DWLD KHVVFG +  DGL V+R+IE      + +PK    I+DCGE
Sbjct:  237 ANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEI-TDGLDVLRQIE-AQGSKDGKPKQKVIISDCGE 299
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.151e-23
Identity = 43/68 (63.24%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ YKG  FHRVIK FMIQ GDF  G+G+G  SIYG KF+DENF  KH  P LLSM
Sbjct:   48 CTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSM 115

HSP 2 Score: 48.521 bits (114), Expect = 1.151e-23
Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            VFFD+TIG   AGRI  EL+ DI PKTAENFR
Sbjct:   14 VFFDITIGGKAAGRIVFELYNDIVPKTAENFR 45
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-23
Identity = 41/68 (60.29%), Postives = 46/68 (67.65%), Query Frame = 1 
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ +KG  FHRVI  FM Q GDF   +G+G  SIYG KF DENFI KHTG G+LSM
Sbjct:   40 CTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSM 107

HSP 2 Score: 51.6026 bits (122), Expect = 1.175e-23
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP VFFD+++   P GRI+MELFAD  P TAENFR
Sbjct:    3 NPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFR 37

HSP 3 Score: 68.5514 bits (166), Expect = 7.826e-11
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            ANSGPN+NG QFFI   K  WLD KHVVFG+V+  GL VV+ IE V +      K+  TI DCG++
Sbjct:  108 ANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVV-KGLDVVKAIEKVGSDSGKTSKVV-TITDCGQL 171
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.446e-23
Identity = 42/66 (63.64%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    G+K   FHRVI DF+ Q GD  K DG+G  SIYG KF+DENF  KHTGPGLLSM
Sbjct: 3100 CTGE--KG---FGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSM 3160

HSP 2 Score: 50.8322 bits (120), Expect = 1.446e-23
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP+VFFDV     P GRI MELF++I P+TAENFR
Sbjct: 3063 NPVVFFDVCADGEPLGRITMELFSNIVPRTAENFR 3097
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.453e-23
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE        GYKG +FHRVI  FM+Q GDF +GDG+G  SIYG KF DENF  KH+ PGLLSM
Sbjct:   37 CTGEQG-----FGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSM 97

HSP 2 Score: 45.8246 bits (107), Expect = 7.453e-23
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FD++I   PAGRI+ +LF D+ PKTA+NFR
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFR 34
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.132e-23
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    G+K   FHRV+ DF+ Q GD  K +G+G  SIYG KFDDENF  KHTGPGLLSM
Sbjct: 2929 CTGE--KG---FGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSM 2989

HSP 2 Score: 49.6766 bits (117), Expect = 9.132e-23
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP+VFFDV     P GRI MELF++I P+TAENFR
Sbjct: 2892 NPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFR 2926
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.239e-22
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  +G    GY  C FHRVI  FM Q GDF+KGDG+G  SIYG KFDDENF  +H G G+LSM
Sbjct:  148 CTGE--RG---FGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSM 208

HSP 2 Score: 47.7506 bits (112), Expect = 1.239e-22
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFD+ IG   AGRI MEL +DI P+TAENFR
Sbjct:  112 PRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFR 145

HSP 3 Score: 74.7146 bits (182), Expect = 1.092e-12
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            ANSGPN+NG QFFI   KCDWLD KHVVFGRV+ DG  VV+K+E+V +  + + K    I+ CGE+
Sbjct:  209 ANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVV-DGQNVVKKMESVGS-KSGKVKEPVIISRCGEL 272
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.056e-22
Identity = 38/69 (55.07%), Postives = 45/69 (65.22%), Query Frame = 1 
Query:  322 CTGEYRKGGL---PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G     P+ YK C FHRV+KDFM+Q GDF +G+G G  SIYG  F+DE+F  KH    LLSM
Sbjct:   44 CTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSM 112

HSP 2 Score: 51.6026 bits (122), Expect = 2.056e-22
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 2 
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRC 235
            + P  FFD+ I   PAGR+  ELF+D+ PKT ENFRC
Sbjct:    6 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRC 42
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPIE_MOUSE5.246e-2460.61Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN5.246e-2460.61Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIE_BOVIN5.246e-2460.61Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPID_NEUCR1.151e-2363.2441 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CP18D_ARATH1.175e-2360.29Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
RBP2_HUMAN1.446e-2363.64E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPIA2_RHIOR7.453e-2362.12Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
RBP2_MOUSE9.132e-2362.12E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPIE_SCHMA1.239e-2262.12Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPIG_HUMAN2.056e-2255.07Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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