DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.764e-21
Identity = 36/60 (60.00%), Postives = 41/60 (68.33%), Query Frame = 1 
Query:  340 KGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            K  +P+ YKG  FHRVIK FM Q GDF   +G+G  SIYG KF+DENF  KH  P LLSM
Sbjct:   52 KPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSM 111

HSP 2 Score: 48.9062 bits (115), Expect = 3.764e-21
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENF 229
            P  FFD++IG  PAGRI  EL++D+ PKTAENF
Sbjct:    6 PKTFFDISIGGKPAGRIVFELYSDVVPKTAENF 38
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.822e-21
Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GYKG  FHRVI  FM QAGDF   +G+G  SIYG +F DENF  KH GPG+LSM
Sbjct:   83 CTGE--KG---FGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSM 143

HSP 2 Score: 45.0542 bits (105), Expect = 3.822e-21
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 2 
Query:  128 NPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            NP+V+ DV     P GR+ +EL AD+ PKTAENFR
Sbjct:   46 NPLVYLDVGADGQPLGRVVLELKADVVPKTAENFR 80
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.848e-21
Identity = 41/68 (60.29%), Postives = 43/68 (63.24%), Query Frame = 1 
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG  G P+ YK   FHR+I  FM Q GDF  GDG G  SIYG  F DENF  KH G GLLSM
Sbjct:   43 CTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSM 110

HSP 2 Score: 41.9726 bits (97), Expect = 3.848e-21
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFD+ +    +GR+  +LF+D  PKTAENFR
Sbjct:    7 PKVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFR 40
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.010e-21
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:  316 QFCTGE-YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-FDDENFIAKHTGPGLLSM 519
            QFCTGE       P+GYK   FHR+I+ FMIQ GDF+ GDG+G  +I+  + F DENF  KH  PGLLSM
Sbjct:   39 QFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSM 108

HSP 2 Score: 43.8986 bits (102), Expect = 5.010e-21
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P+VF D+ I     GRIK+ LF+ I PKTAENFR
Sbjct:    5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFR 38

HSP 3 Score: 80.1073 bits (196), Expect = 2.599e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+G +SNGCQFFIT   CD+LD KHVVFG V+ +G  +V++IE+   G N+RPK    I +CGEM
Sbjct:  109 ANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVI-EGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.449e-21
Identity = 43/66 (65.15%), Postives = 47/66 (71.21%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG     YKG +FHRVIK+FMIQ GDF +GDG+G  SIYG KF DENF  KHT P  LSM
Sbjct:   68 CTGETGKG-----YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSM 128

HSP 2 Score: 37.7354 bits (86), Expect = 6.449e-21
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FD+  G    G+I M L+ D+ PKT ENFR
Sbjct:   34 VYFDIKQGEESLGKIVMGLYGDVVPKTVENFR 65

HSP 3 Score: 70.8626 bits (172), Expect = 1.577e-11
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+G ++NG QFFIT     WLD KHVVFG VL +G  +V  IEN  TG  + PK+  TIAD GE+
Sbjct:  129 ANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVL-EGQDIVDAIENAPTGARSNPKVDITIADAGEI 193
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.078e-20
Identity = 42/69 (60.87%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:  322 CTGEYRKG---GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   G+P+ YKG +FHRVIK FMIQ GD    DG+G  SIYG KFDDENF  KH   G+LSM
Sbjct:   40 CTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSM 108

HSP 2 Score: 40.4318 bits (93), Expect = 1.078e-20
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 2 
Query:  140 FFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            F D++IG    GRI +EL+ D+ PKTAENFR
Sbjct:    7 FMDISIGGELEGRIVIELYDDVVPKTAENFR 37
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.402e-20
Identity = 41/68 (60.29%), Postives = 44/68 (64.71%), Query Frame = 1 
Query:  322 CTGEYRKGGL--PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G    P+ YKG  FHRVIK FMIQ GDF   +G+G  SIYG KF DENF  KH  P LLSM
Sbjct:   48 CTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSM 115

HSP 2 Score: 44.669 bits (104), Expect = 1.402e-20
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 2 
Query:  125 KNPIVFFDVTIGTIPAGRIKMEL----FADIAPKTAENFR 232
            + P V+FD+ IG+  AGRI +EL    F D+ PKTAENFR
Sbjct:    6 RRPRVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFR 45
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.425e-20
Identity = 41/68 (60.29%), Postives = 45/68 (66.18%), Query Frame = 1 
Query:  322 CTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE    K G  + YKG  FHR+I  FM+Q GDF  G+G G  SIYG KF DENF  KHTGPG LSM
Sbjct:   71 CTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSM 138

HSP 2 Score: 37.7354 bits (86), Expect = 1.425e-20
Identity = 19/32 (59.38%), Postives = 20/32 (62.50%), Query Frame = 2 
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FDV I    AGRI M LF    PKT ENFR
Sbjct:   37 VYFDVEIDGKAAGRIVMGLFGKTVPKTVENFR 68
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.435e-20
Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GYKG  FHRVI  FM Q GDF + +G+G  SIYG KF DENF  KHT PG+LSM
Sbjct:   40 CTGE--KG---FGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSM 100

HSP 2 Score: 41.9726 bits (97), Expect = 2.435e-20
Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFD+       GRI MEL AD+ PKTAENFR
Sbjct:    4 PQVFFDLQANGENLGRIVMELRADVVPKTAENFR 37
[Close]
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.085e-20
Identity = 36/60 (60.00%), Postives = 41/60 (68.33%), Query Frame = 1 
Query:  340 KGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            K  +P+ YKG  FHRVIKDFM Q GDF   +G+G  SIY  KF+DENF  KH  P LLSM
Sbjct:   50 KPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSM 109

HSP 2 Score: 46.2098 bits (108), Expect = 3.085e-20
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 2 
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENF 229
            P  FFD++IG  P GRI  EL+ DI PKTAENF
Sbjct:    4 PKTFFDISIGGKPQGRIVFELYNDIVPKTAENF 36
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPID_KLULA3.764e-2160.00Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPIF_BOVIN3.822e-2162.12Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYP6_RHIOR3.848e-2160.29Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIH_SCHPO5.010e-2155.71Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIB_YARLI6.449e-2165.15Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
CYP40_ARATH1.078e-2060.87Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_ASPFU1.402e-2060.29Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CP20A_ARATH1.425e-2060.29Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPIA_HEMPU2.435e-2062.12Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPID_YEAST3.085e-2060.00Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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