DY256757

Overview
NameDY256757
Unique NameDY256757
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1114
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.220e-20
Identity = 39/69 (56.52%), Postives = 42/69 (60.87%), Query Frame = 1
Query:  322 CTGEY---RKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE       G  + YKG  FHR+IKDFM Q GDF  G G G  SIYG KF+DENF   H  P LLSM
Sbjct:   44 CTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSM 112          

HSP 2 Score: 44.2838 bits (103), Expect = 5.220e-20
Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            P VFFD++    P GR+  EL+ D+ PKTAENFR
Sbjct:    8 PKVFFDISADGKPKGRVVFELYNDVVPKTAENFR 41          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.860e-20
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  343 GGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            G    GY+G  FHR+I +FMIQ GDF +G+G+G  SIYG KF+DE+F  KH GPG+LSM
Sbjct:  120 GAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSM 178          

HSP 2 Score: 40.817 bits (94), Expect = 6.860e-20
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            +FFD+ IG   AGRI + LF D  PKT ENF+
Sbjct:   84 IFFDIEIGGESAGRIVIGLFGDAVPKTVENFK 115          

HSP 3 Score: 68.9366 bits (167), Expect = 5.992e-11
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGP-NNRPKLACTIADCGEM 894
            AN+GPN+NG QFFI      WLDN+HVVFG V+ +GL VV+++E+  T   +N PK  C IA  GE+
Sbjct:  179 ANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVI-EGLDVVKQLESQETSKLDNSPKKPCKIAKSGEL 244          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.971e-20
Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GY G  FHRVI  FM+Q GDF +G+G+G  SIYG KF DENF  KH  PGLLSM
Sbjct:   38 CTGE--KG---YGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSM 98          

HSP 2 Score: 38.891 bits (89), Expect = 6.971e-20
Identity = 18/31 (58.06%), Postives = 20/31 (64.52%), Query Frame = 2
Query:  140 FFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            FFDV     P GRI  +LF D+ PKTA NFR
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFR 35          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.494e-19
Identity = 63/194 (32.47%), Postives = 81/194 (41.75%), Query Frame = 1
Query:  322 CTGEYR---KGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMEFV*GEELVHSLFLKILQS*RDVQLF*CGMGKERSREMNNQSVKVRDFYGKEMKLCCLQANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            CTG+     K G P+ YK   FHRVIKDFM Q G                   D    + H G G        GE +    F                  ++ + ++N+                   ANSGPN+NG QFFIT      LD KHVVFG V+ +G  +VR++E    G N+RP     IADCGE+
Sbjct:   40 CTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGG-------------------DFTAPSDHLGTG--------GESIYGEKF------------------EDENFKLNHNK-----------PFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVI-EGKSIVRQLERSEKGANDRPVEDWKIADCGEL 176          

HSP 2 Score: 38.1206 bits (87), Expect = 1.494e-19
Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FD++    P GR+  +L+ D+ PKTA NFR
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFR 37          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.942e-19
Identity = 41/68 (60.29%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  322 CTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G  G P+ +KG  FHRVIK FMIQ GDF   +G+G  SIYG KF DENF  KH  P LLSM
Sbjct:   42 CTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSM 109          

HSP 2 Score: 40.0466 bits (92), Expect = 1.942e-19
Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            + P VFFD+ IG    GRI +EL   + PKTAENFR
Sbjct:    6 RRPRVFFDIQIGNEKTGRIALELV--LVPKTAENFR 39          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 2.595e-19
Identity = 41/66 (62.12%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GY G  FHRVI DFM+Q GDF  G+G+G  SIYG KF DENF   H  PGLLSM
Sbjct:   38 CTGE--KG---FGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSM 98          

HSP 2 Score: 40.0466 bits (92), Expect = 2.595e-19
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            V+FDV     P GR+  +L+ DI PKTAENFR
Sbjct:    4 VYFDVEADGQPIGRVVFKLYNDIVPKTAENFR 35          

HSP 3 Score: 68.9366 bits (167), Expect = 5.992e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  697 ANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            AN+GPN+NG QFFIT   C WLD KHVVFG V+ DG  +V+K+E++ + P+   K    +A  GE+
Sbjct:   99 ANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVV-DGYDIVKKVESLGS-PSGATKARIVVAKSGEL 162          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.316e-19
Identity = 42/66 (63.64%), Postives = 47/66 (71.21%), Query Frame = 1
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GYKG  FHRVI+DFMIQ GDF KG+G+G  S+YG  F DENF   H GPG+LSM
Sbjct:  129 CTGE--KG---FGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSM 189          

HSP 2 Score: 33.113 bits (74), Expect = 3.316e-19
Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 2
Query:  137 VFFDVTIGTIP---AGRIKMELFADIAPKTAENFR 232
            V+FD+++G      AGRI + L+ D  P+T ENFR
Sbjct:   92 VYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFR 126          

HSP 3 Score: 74.7146 bits (182), Expect = 1.092e-12
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1
Query:  616 ERSREMNNQSVKVRDFYGKEMKLCCL------QANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            E+      +SV  R F  +  KL  +       AN+GPN+NG QFFI   K  WLD +HVVFG+V+ +G+ VV+ IE   T   +RP+    IADCG++
Sbjct:  157 EKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVI-EGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.376e-19
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  322 CTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE  KG    GYKG +FHR+I  FM Q GDF  G+G+G  SIYG KF+DENF  KH+ P +LSM
Sbjct:   38 CTGE--KG---FGYKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSM 98          

HSP 2 Score: 40.817 bits (94), Expect = 3.376e-19
Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  140 FFDVTIGTIPAGRIKMELFADIAPKTAENFR 232
            FFD++IG  PAGRI   LF D+ PKT ENFR
Sbjct:    6 FFDISIGGKPAGRIVFALFDDV-PKTVENFR 35          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.392e-19
Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  322 CTGEYRKGGL-PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            CTGE   G   P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF DENFI KHTGPG+LSM
Sbjct:   19 CTGEKGMGDRKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSM 85          

HSP 2 Score: 30.4166 bits (67), Expect = 3.392e-19
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  185 MELFADIAPKTAENFR 232
            MELF D+ P+TAENFR
Sbjct:    1 MELFQDVVPQTAENFR 16          
BLAST of DY256757 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.265e-19
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 1
Query:  325 TGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 519
            T +    G P+ ++   FHRVI  FMIQ GDF + DG+G  SIYG KF DE+   KH  P LLSM
Sbjct:   57 TSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSM 121          

HSP 2 Score: 47.3654 bits (111), Expect = 4.265e-19
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 2
Query:  116 PNPKNPIVFFDVTIGTIPAGR-----IKMELFADIAPKTAENFR 232
            P P NPIV+ D+  G+ PA R     I +EL+AD  P+TAENFR
Sbjct:    8 PKPGNPIVYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFR 51          

HSP 3 Score: 70.0922 bits (170), Expect = 2.690e-11
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:  658 DFYGK-EMKLCCLQANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLXDGLLVVRKIENVATGPNNRPKLACTIADCGEM 894
            D  GK ++      AN+G N+NG QFFIT      LD KHVVFGRVL  G  VVR++E+V T  ++RPK    I DCGE+
Sbjct:  108 DLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVL-KGKGVVRRVESVETVASDRPKEDVKIVDCGEL 186          
The following BLAST results are available for this feature:
BLAST of DY256757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
PPID_DEBHA5.220e-2056.52Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYPB_VICFA6.860e-2059.32Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
CYPH_SCHPO6.971e-2062.12Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_CANAL1.494e-1932.47Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPID_ASPOR1.942e-1960.29Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CYPH_YEAST2.595e-1962.12Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CP20B_ARATH3.316e-1963.64Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIA_ECHGR3.376e-1959.09Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYPH_ALLCE3.392e-1964.18Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPID_USTMA4.265e-1950.77Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AA03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256757 ID=DY256757; Name=DY256757; organism=Citrus clementina; type=EST; length=1114bp
GGCGAGTCCGAAGTCGAAGCCCGGAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGTGTGGCATTTAGTTTGTC
AGATTTGTGGTTTTGTTGAAGTTCAGCTACTCGTTTATGTCCATGTCATA
TGTAATTGGTGGTGGCAGTTCTGCACCGGCGAGTACAGAAAGGGAGGATT
GCCTGTTGGTTACAAGGGATGCCAGTTCCATAGGGTGATCAAGGATTTTA
TGATTCAAGCTGGTGATTTTCTGAAGGGTGATGGTAGTGGATGTACTTCA
ATTTATGGACATAAGTTTGATGATGAAAATTTTATTGCTAAACACACTGG
TCCAGGTCTATTATCTATGGAATTTGTTTGAGGTGAGGAACTAGTGCACT
CATTGTTTCTAAAGATATTACAAAGTTAAAGAGATGTTCAACTATTCTAA
TGTGGAATGGGCAAAGAGAGATCAAGGGAGATGAATAACCAATCAGTGAA
AGTGCGTGATTTTTACGGCAAAGAGATGAAGCTTTGTTGTTTACAGGCAA
ACAGCGGACCAAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAA
TGTGATTGGCTTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGNAGA
TGGTCTTTTGGTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACA
ACCGGCCTAAACTGGCATGCACTATCGCAGATTGTGGAGAAATGTGAAAC
TGATAACTTGGAACCATTTGTGGCTTGCCTAGGACTGATAAAAAAAAAAA
TATCCCTTAACCAATAAAATTTAAAATTGTACTTCTTTTTAAAAAAATTG
ATGTGAACTAGTGGCAAGGTTAAACTTGTGAATGGTTGTTGAAAAATTCC
CAGTTTTGGTTGATGGGAAATTCCCTTTTATTTCCCATTTAAATTAAAAG
TTTTGTTTTCCAAT
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