DY256759

Overview
NameDY256759
Unique NameDY256759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.693e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.517e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K E+DESGPSIVHRKCF
Sbjct:  298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKE+TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  297 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT_SCHDU (Actin OS=Scherffelia dubia PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITA+APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  299 NIVLSGGTTMFPGIADRMSKEITAVAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 378
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT_PINCO (Actin (Fragment) OS=Pinus contorta PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+ESGPSIVHRKCF
Sbjct:   82 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYEESGPSIVHRKCF 161
[Close]
BLAST of DY256759 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 3 
Query:    3 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 242
            NIVLSGG+TMFPGIADRMSKEITALAPS+MKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  298 NIVLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of DY256759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
ACT1_ORYSI2.693e-3896.25Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT1_ARATH2.693e-3896.25Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=... [more]
ACT11_SOLTU2.693e-3896.25Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT11_ARATH2.693e-3896.25Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT7_SOLTU3.517e-3896.25Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT3_SOLTU4.593e-3895.00Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT1_PEA4.593e-3896.25Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT_SCHDU5.999e-3895.00Actin OS=Scherffelia dubia PE=2 SV=1[more]
ACT_PINCO5.999e-3896.25Actin (Fragment) OS=Pinus contorta PE=3 SV=1[more]
ACT_CHLRE5.999e-3895.00Actin OS=Chlamydomonas reinhardtii PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AB02ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256759 ID=DY256759; Name=DY256759; organism=Citrus clementina; type=EST; length=690bp
GTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCCCCGGTATTGCCGAC
CGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGCAGCATGAAGATCAA
GGTCGTGGCTCCACCAGAGAGAAAATACAGTGTTTGGATTGGAGGATCAA
TCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGATCTCAAAGGGCGAG
TATGATGAGTCTGGTCCATCCATTGTCCACAGGAAATGCTTCTAAGTTCT
TTAAGTGCTTGATGGGTGAGTTCTTTTTTTCCATTTAGTTGGTTTTTTGT
GTCTCGTTTCGCGAACTCAAGTTGGTTGACATGGAGAAGTGCTAAGGTTG
GGGCCATTGAAGGAGGCATATCTCGATATTGATGTTATTATACAAGCTTC
TTACAGCGTTTGAGGGGGGCTTATTTCTGTACTCAACCGTCTTCCTTGCC
TTGCATTCATCTGGTGTTCAACCAAGTCTTTTTTCTTTTTTTTCCTTTTT
TTTTTTTAAAGTAGGATGTTTGTAGCTGGAGATGAAGAGTGGTTGTGATG
CTTTTCTATTTCATTTTCTAAATTTTCATATTTGAAGGTTTTTTTTCTCC
CCCTCTCAAAAGGAACATTAATGTTAATAGCTATTGTATGAGAAAACTTT
AATTAGTGTCAGCTTGCAGTCATAAATTTGGTTATTAAAA
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