DY256770

Overview
NameDY256770
Unique NameDY256770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROAN (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila ananassae GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.469e-29
Identity = 80/225 (35.56%), Postives = 119/225 (52.89%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKA-AGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            E   K V EYKFNDDG KVK+    ++ K     +SK    RR W KFGD+  +  G  S+ TM S E  +L        +  ET+  AG ++A+          CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ GA   G   R R+D ++VR++NLSE   ETDL EL +  G  +++Y+A ++ TG+ +GF +V+F
Sbjct:   28 EGDYKYVTEYKFNDDGKKVKVVRTFKIEKQV---VSKAVARRRGWVKFGDSRLDKPGPNSQTTMASEEIFMLFMGSKEFEQTHETQMDAGKNIAK----------CRICN--GEHWSVNCPYKGTSMDSKTLMESKANAAAAAALNDPSKPGKYVPPFMKDGAGGAGGKGRERDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHF 237          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_CHAGB (Eukaryotic translation initiation factor 3 subunit G OS=Chaetomium globosum GN=TIF35 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.741e-29
Identity = 90/254 (35.43%), Postives = 131/254 (51.57%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRV---RKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAV--LMVCRTCGKKGDHWTSRCPFKDLAAP---------AETFIDKPXXXXXXXXXXXXT--KGTYVPPGMRAGA-----ERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            PP Q I  +++G   +IEY+ ND G KVK     R    R++ N R++    ER+ WAKFGD+  +  G      +  E ++ RP     K E    A D  AQ  K       + CR C   G+H+T+RCP+KD  AP         A    D+P               KG+YVPP MRAGA     ER G     R+D  ++RVTN+SE   E +L ++F  FG V+RV++A D+ TG+++GF F+++ ++
Sbjct:   29 PPPQKI-QNKDGTWTIIEYRINDLGQKVKATRRVRYVVRREVVNPRVA----ERKTWAKFGDSANDPKGPAPDTTTVGENIIFRPSVNWRK-EAKDEANDPNAQAMKDKLKDKKVKCRICN--GEHFTARCPYKDTMAPIGEAGPADVAAGMGDEPAAAGPAAAGAAGAGKKGSYVPPAMRAGAGGAQGERMGGKYGERDDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGMAKGFAFISYADR 274          

HSP 2 Score: 21.9422 bits (45), Expect = 1.741e-29
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  884 REDASKAINKLNGLWVR 934
            R+DA KA NK++G   R
Sbjct:  274 RDDAVKACNKMDGFGFR 290          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_SCLS1 (Eukaryotic translation initiation factor 3 subunit G OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif35 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.727e-28
Identity = 84/263 (31.94%), Postives = 134/263 (50.95%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAP---------AETFIDKPXXXXXXXXXXXXTKGTYVPPGMR----AGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ---GKMLQKLSTN*MGYG 929
            P+     +++G + ++ ++FNDDG KVK     R  K+    ++ R  ER++W KFG + ++  G      S  E ++ RP     K  + + + D+ A   K     + CR C   G+H+T++CPFK   AP         A    D P             K +YVPP +R    AG ER G     R+D  ++RVTN+SE   E +L ++F  FG V+RV++A D++TG+++GF F++F E+    K  +K+     GYG
Sbjct:   23 PQSTTTTNKDGTQTIVTWRFNDDGKKVKTTRRIRFTKVKEI-VNPRVAERKSWGKFGLSQKDAAGPASDTTSVGENIIFRPSTNWRKDAKEEVS-DAGAMKNKLKDKQVKCRICS--GEHFTAKCPFKGTMAPLGEEGAVDVAAGHADTPEGPGGLGAG----KSSYVPPHLRNGGAAGGERMGGGKFERDDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKACEKMD----GYG 273          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_BOTFB (Eukaryotic translation initiation factor 3 subunit G OS=Botryotinia fuckeliana (strain B05.10) GN=tif35 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.727e-28
Identity = 84/263 (31.94%), Postives = 134/263 (50.95%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAP---------AETFIDKPXXXXXXXXXXXXTKGTYVPPGMR----AGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ---GKMLQKLSTN*MGYG 929
            P+     +++G + ++ ++FNDDG KVK     R  K+    ++ R  ER++W KFG + ++  G      S  E ++ RP     K  + + + D+ A   K     + CR C   G+H+T++CPFK   AP         A    D P             K +YVPP +R    AG ER G     R+D  ++RVTN+SE   E +L ++F  FG V+RV++A D++TG+++GF F++F E+    K  +K+     GYG
Sbjct:   23 PQSTTTTNKDGTQTIVTWRFNDDGKKVKTTRRIRFTKVKEI-VNPRVAERKSWGKFGLSQKDAAGPASDTTSVGENIIFRPSTNWRKDAKEEVS-DAGAMKNKLKDKQVKCRICS--GEHFTAKCPFKGTMAPLGEEGAVDVAAGHADTPEGPGGLGAG----KSSYVPPHLRNGGTAGGERMGGGKFERDDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFISFQERSDAAKACEKMD----GYG 273          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_USTMA (Eukaryotic translation initiation factor 3 subunit G OS=Ustilago maydis GN=TIF35 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.062e-28
Identity = 86/237 (36.29%), Postives = 114/237 (48.10%), Query Frame = 3
Query:  216 NGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKD-LAAPAETFIDKP-----------XXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM-----RRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            NGVK VIEY+ N DG K+KI    + R L   +++    ER+ W KFG    +  G      +  E ++ +  A     E      D + Q      +  VCR C  KGDH+T++CP+KD L A      D P                         G YVPP MR GA+  G  M       R+D  ++RVTNLSED  + DL ELF  FG V RVYV  D++TGI +G+ FV+F
Sbjct:   42 NGVKVVIEYRTNPDGKKIKITRRVK-RTLVKTKVNHEVAERKTWTKFGQEKGKAAGPHSATTTIGENVVLKMSAGNKTAEPEVDDMDKMRQQLANKRI--VCRLC--KGDHFTTKCPYKDTLEAIPGAGADTPEGGDGSMTPLAGMDPTNPAVAASAGGKYVPPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETGICKGYAFVSF 273          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_ASPTN (Eukaryotic translation initiation factor 3 subunit G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif35 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.053e-27
Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRA--PGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPA-ETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P Q +  +++G K V+ Y+FNDDG KVK+    +   +    ++ +  ERR+WAKFG       G      S  E ++ RP         E  K  G+  +   +     + CR C   G+H+T+RCPFKD  AP  E   +                G+YVPP +R GA   G  M     ++D  ++RVTN+SE   E +L +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   23 PAQQVTTNKDGTKTVVSYRFNDDGKKVKVTRRIKTT-VVREHVNPQVAERRSWAKFGLEKGHAAGPSFDTTSVGENIVFRPSVNWKAQAAEAEKDGGEKGSMKDQLKDKKVKCRICS--GEHFTARCPFKDTMAPVDEAGAEGAGEDAPAAGAVGTGTGSYVPPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 257          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROAN (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila ananassae GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.346e-27
Identity = 77/223 (34.53%), Postives = 116/223 (52.02%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++    + G  MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-MMEKKATAAAAAAVDAPKSGKYVPPFLKDSVGKVGMGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 237          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_CULQU (Eukaryotic translation initiation factor 3 subunit G OS=Culex quinquefasciatus GN=eIF3-S4 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.001e-27
Identity = 82/235 (34.89%), Postives = 125/235 (53.19%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSR-LTMVSTEEILLERPRAPGSKPEETKA--AGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERT-GTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            PP +++   ENG K V EYK+N D  KVK+    ++ +L    + K   +R+NWAKFGD+  +  G    T   +E+I ++      +K EE K+  A DSL  + K       CR C  +G+HW+ +CP+K  +  A     KP             K G YVPP MR   +   G + R R+D  ++R++NLSE   E DL EL +  G  S++++A D+ TG+ +GF +V+F
Sbjct:   24 PPTEIV---ENGQKVVTEYKYNKDDKKVKVVRTYKITRLV---VPKSVAKRKNWAKFGDSAGDKPGPNPQTTFVSEDIYMQ---FVSNKEEEQKSDNALDSLKNIAK-------CRIC--EGEHWSVQCPYKGTSYEAGKA--KPVPAAQPESSSAPIKSGKYVPPSMRDSQKAALGANPRGRDDTTAIRISNLSEAMTEADLEELVKKIGPHSKMFLARDKNTGLCKGFAYVHF 238          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROVI (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila virilis GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.001e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFGD+  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPSKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-LMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGMGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_NEOFI (Eukaryotic translation initiation factor 3 subunit G OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=TIF35 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.825e-27
Identity = 79/243 (32.51%), Postives = 124/243 (51.03%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKG----TYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P Q +  +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR+WAKFG       G      S  E ++ RP    RA  ++ E+      S+    K   V   CR C   G+H+T+RCPFKD  AP +                    G    +YVPP +R GA   G  M     ++D  ++RVTN+SE   E++L +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   24 PAQQVTTNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRSWAKFGLEKGHAAGPSFDTTSVGENIIFRPSVNWRAQAAEAEKAGPEKGSIKDQLKDKKVK--CRICS--GEHFTARCPFKDTMAPVDETAAAGAEPGAEDVPAAGGLGAGTSSYVPPHLRKGAAAGGERMAGKYEKDDLATLRVTNVSELAEESELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 261          
The following BLAST results are available for this feature:
BLAST of DY256770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
EI3G2_DROAN1.469e-2935.56Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CHAGB1.741e-2935.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_SCLS14.727e-2831.94Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_BOTFB4.727e-2831.94Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_USTMA8.062e-2836.29Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ASPTN1.053e-2732.77Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROAN2.346e-2734.53Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CULQU4.001e-2734.89Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROVI4.001e-2734.98Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_NEOFI6.825e-2732.51Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256770 ID=DY256770; Name=DY256770; organism=Citrus clementina; type=EST; length=1238bp
GTTTCACAAAAAATCGAAATCTCAAACCCTAAAACGCTTTGTCTCGCAAC
CTCTCCAACGCTTGTGTTTTTCTTAATCTGATTCATTCGAAAAAGATGTC
GGTTTCGACTCAAAATCCGACCCAACCAAAGCTCCGTTGGAGCGAACTGG
ACGAAGAAGACGGCGAGGATTTGGACTTCCTGCTGCCGCCTAAACAAGTG
ATCGGCCCCGACGAGAACGGAGTCAAGAAAGTTATTGAATACAAGTTTAA
CGATGACGGCAATAAGGTCAAAATAACCACCACCACGCGCGTGCGCAAGC
TCGCTAACGCTCGTCTCAGCAAACGCGCGCTGGAGAGGAGAAACTGGGCC
AAGTTCGGCGACGCCGTTCGCGAAGACGTCGGTAGCAGACTTACCATGGT
CTCCACCGAAGAGATCTTGCTGGAACGGCCTAGGGCTCCTGGTAGCAAAC
CAGAAGAGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGT
GGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTG
GACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCA
TTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACC
AAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGG
AACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACC
TATCGGAGGACACTCGGGAAACTGACTTGCTTGAGCTCTTCCGGCCTTTT
GGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAG
CAGAGGTTTTGGTTTTGTGAACTTTTGTGAACAAGGGAAGATGCTTCAAA
AGCTATCAACAAACTGAATGGGCTATGGGTAAGAACAATCTCCTTCCTCA
AAAGTTAAATGGGCCACCTCCCAGGACTAACTTAAATCGATTCAATTTTT
CCTTTGGACCTTTAACGGGGAAAACAAAAACAATTTTTGGGGTATTTATT
TTTAAACTAACCTTTAAGAATTGGAAAGGAACTTTGGGAGGGGTTTTGGT
TTAAAAAAAACTAAGGGGTTTTTCCCTACAAAAGAAACTTTTGGTACCTC
CAAAAATATTTTTAAATTTTTTGGCCCCGATGAAGGTTTCAAAAGGGGTT
TTTTTTCTAAGTGTTTTTTTTTTGTTTTTTTTTCTATA
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