DY256770

Overview
NameDY256770
Unique NameDY256770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_EMENI (Eukaryotic translation initiation factor 3 subunit G OS=Emericella nidulans GN=tif35 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 6.825e-27
Identity = 81/248 (32.66%), Postives = 125/248 (50.40%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK---------GTYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P Q I  +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR WAKFG       G      S  E ++ RP    +A  ++ E+      S+    K   V   CR C   G+H+T+RCPFKD  AP    +D+P                       G+YVPP +R GA   G  M     ++D  ++RVTN+SE   E +L +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   22 PPQQITTNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRTWAKFGLEKGHAAGPSFDTTSVGENIVFRPSVNWKAQAAEAEKNGGEKGSIKDQLKDKKVK--CRICS--GEHFTARCPFKDTMAP----VDEPGAGGAEGGAAAGEDAAGGLGAGGGSYVPPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEEQELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 260          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_ASPCL (Eukaryotic translation initiation factor 3 subunit G OS=Aspergillus clavatus GN=tif35 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.825e-27
Identity = 80/245 (32.65%), Postives = 126/245 (51.43%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFI-----DKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            PP+QV   +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR+WAKFG       G      S  E ++ RP    RA  ++ E+      S+    K   V   CR C   G+H+T+RCPFKD  AP +        +                 +YVPP MR GA   G  M     ++D  ++RVTN+SE   E+++ +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   23 PPQQVT-TNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRSWAKFGLEKGHAAGPSFDTTSVGENIVFRPSVNWRAQAAEAEKAGGEKGSIKDQLKDKKVK--CRICS--GEHFTARCPFKDTMAPVDESTGAAGGEPGAEDEAAAGGLGAGTSSYVPPHMRKGAASGGERMAGKYEKDDLATLRVTNVSELAEESEIRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 261          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROMO (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila mojavensis GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 6.825e-27
Identity = 78/223 (34.98%), Postives = 118/223 (52.91%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFGD+  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-LMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGMGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_COCIM (Eukaryotic translation initiation factor 3 subunit G OS=Coccidioides immitis GN=TIF35 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.914e-27
Identity = 82/242 (33.88%), Postives = 122/242 (50.41%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRA--PGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGT----YVPPGMRAGAERTGTDMRRRNDEN---SVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            PP+QVI  +++G K VI Y+FNDDG KVK     R   +    ++ R  ER+ WAKFG       G  L   S  E ++ RP         E  KA G+      +     + CR C   G+H+T+RCPFKD  AP +                    G+    YVPP +R G    G  M  R + +   ++RVTN+SE   E +L ++F  FG V+RV++A D++T +++GF F++F ++
Sbjct:   23 PPQQVIS-NKDGTKTVITYRFNDDGKKVKTTRRIRTT-VVKEHVNPRVAERKAWAKFGLEKDHAPGPSLDTTSVGENIIFRPSVNWKAQAKEVEKAGGEKGGLKDQLKDKKVKCRICS--GEHFTARCPFKDTMAPVDEPTGPTGGDNEDEERPAGALGSGATAYVPPALRKGGSG-GEKMAGRYERDELATLRVTNVSELAEEGELRDMFGRFGHVTRVFLAKDKETNMAKGFAFISFADR 259          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_ASPOR (Eukaryotic translation initiation factor 3 subunit G OS=Aspergillus oryzae GN=tif35 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.914e-27
Identity = 80/245 (32.65%), Postives = 125/245 (51.02%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXT------KGTYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P Q +  +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR+WAKFG       G      S  E +  RP    +A  ++ E+      S+    K   V   CR C   G+H+T+RCPFKD  AP    +D+P                    G+YVPP +R GA   G  M     ++D  ++RVTN+SE   E +L +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   23 PAQQVTTNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRSWAKFGLEKGHAPGPSFDTTSVGENIAFRPSINWKAQAAEAEKNGGEKGSMKDQLKDKKVK--CRICS--GEHFTARCPFKDTMAP----VDEPTAGGAGEDDEAAAGAVGTGSGSYVPPHLRKGAAGGGERMGGKFEKDDLATLRVTNVSELAEEGELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 258          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROWI (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila willistoni GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.164e-26
Identity = 77/223 (34.53%), Postives = 118/223 (52.91%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++ G  MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPSKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-LMEKKAAAAASAAVDAPKSGKYVPPFLK-DSQKGGMGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_AEDAE (Eukaryotic translation initiation factor 3 subunit G OS=Aedes aegypti GN=eIF3-S4-1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.520e-26
Identity = 85/236 (36.02%), Postives = 126/236 (53.39%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGS--RLTMVSTEEILLERPRAPGSKPEETKA--AGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAER-TGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            PP ++I   ENG K V EYK+N D  KVK+    ++ +L    + K    R+NW+KFGD+  +  G   + TMVS E++ ++      +K EE K+  A DSL  + K       CR C  +G+HW+  CP+K  A  A     KP             K G YVPP MR   +   G + R R+D  ++R++NLSE   E DL EL +  G  S++++A D+ TG+ +GF +V+F
Sbjct:   24 PPTEII---ENGQKIVTEYKYNKDDKKVKVVRTYKITRLV---VPKSIAMRKNWSKFGDSSNDKPGPNPQTTMVS-EDVYMQ---FVSNKEEEQKSDNALDSLKNIAK-------CRIC--EGEHWSLSCPYKGTAYEAGKA--KPVVPVQQEMAPTTAKSGKYVPPSMRDSQKPGMGGNPRGRDDTTAIRISNLSEAMTEADLEELVKKIGPHSKMFLARDKNTGLCKGFAYVHF 238          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_NEUCR (Eukaryotic translation initiation factor 3 subunit G OS=Neurospora crassa GN=tif-35 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.986e-26
Identity = 82/252 (32.54%), Postives = 130/252 (51.59%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARL-SKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAV--LMVCRTCGKKGDHWTSRCPFKDLAAP----------AETFIDKPXXXXXXXXXXXXTKGTYVPPGMR------AGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            PP+++   D  G   +IEY+ ND+G KVK     R+R + +  + + R  ER++W KFG +V++  G      S  E ++ +P     + E    + D  AQ  K       + CR C   G+H+T+RCP+KD  AP          A +  D+              KG+YVPP +R      A  ER G     R+D  ++RVTN+SE   E +L ++F  FG V+RV++A D+ TG+++GF F++F ++
Sbjct:   25 PPQKITNKD--GSTTIIEYRLNDNGQKVKTTR--RIRYITHREVVNPRVAERKSWTKFGLSVKDGAGPAPDTTSVGENIIFKPSF-NWRQEAKDESKDPNAQAMKDKLKDKKVKCRICN--GEHFTARCPYKDTMAPIGEAGAAADVAASAADEAAAASQGAAGAGK-KGSYVPPALRGAGGAAAAGERMGGKYGERDDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADR 268          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_ANOGA (Eukaryotic translation initiation factor 3 subunit G OS=Anopheles gambiae GN=eIF3-S4 PE=3 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 1.986e-26
Identity = 85/236 (36.02%), Postives = 127/236 (53.81%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGS--RLTMVSTEEILLERPRAPGSKPEETKA--AGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRA--GAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            PP +VI   ENG K V EYK+N D  KVK+    R  K++   + K    R++ AKFGD+  +  G   + TMVS E++ ++      +K EE K   A DS+  + K       CRTC  +G+HW+  CP+K+ A    T   KP              G YVPP M+   G    G  MR R+D +++R++NLSE   E DL EL + FG  ++++++ D+ TG+ +GF +V+F
Sbjct:   24 PPSEVI---ENGQKIVTEYKYNKDDKKVKVV---RTYKISRVVVPKCVARRKSLAKFGDSATDRPGPNPQTTMVS-EDVFMQFIT---NKEEEQKNENALDSMKNIVK-------CRTC--EGEHWSFHCPYKNSAYDKPT---KPTTAPVPETTSSSKPGKYVPPHMKESQGKPGIGGAMRGRDDTSAIRISNLSEAMTEADLEELVKKFGPHTKMFLSRDKSTGLCKGFAYVHF 237          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_ASPFU (Eukaryotic translation initiation factor 3 subunit G OS=Aspergillus fumigatus GN=tif35 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.594e-26
Identity = 78/243 (32.10%), Postives = 123/243 (50.62%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERP----RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKG----TYVPPGMRAGAERTGTDMR---RRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P Q +  +++G K V+ Y+FND+G KVK+    +   +    ++ +  ERR+WAKFG       G      S  E ++ RP    R   ++ E+      S+    K   V   CR C   G+H+T+RCPFKD  AP +                    G    +YVPP +R GA   G  M     ++D  ++RVTN+SE   E++L +LF  FG V+RV++A D++T  ++GF F++F ++
Sbjct:   24 PAQQVTTNKDGTKTVVSYRFNDEGKKVKVTRRIKTT-VVREHVNPQVAERRSWAKFGLEKGHAAGPSFDTTSVGENIVFRPSVNWRVQAAEAEKAGPEKGSIKDQLKDKKVK--CRICS--GEHFTARCPFKDTMAPVDETAAAGAEPGADDVPAAGGLGAGTSSYVPPHLRKGAAAGGERMAGKYEKDDLATLRVTNVSELAEESELRDLFERFGRVTRVFLARDRETQRAKGFAFISFADR 261          
The following BLAST results are available for this feature:
BLAST of DY256770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
EIF3G_EMENI6.825e-2732.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ASPCL6.825e-2732.65Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROMO6.825e-2734.98Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_COCIM8.914e-2733.88Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ASPOR8.914e-2732.65Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROWI1.164e-2634.53Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_AEDAE1.520e-2636.02Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_NEUCR1.986e-2632.54Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ANOGA1.986e-2636.02Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_ASPFU2.594e-2632.10Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256770 ID=DY256770; Name=DY256770; organism=Citrus clementina; type=EST; length=1238bp
GTTTCACAAAAAATCGAAATCTCAAACCCTAAAACGCTTTGTCTCGCAAC
CTCTCCAACGCTTGTGTTTTTCTTAATCTGATTCATTCGAAAAAGATGTC
GGTTTCGACTCAAAATCCGACCCAACCAAAGCTCCGTTGGAGCGAACTGG
ACGAAGAAGACGGCGAGGATTTGGACTTCCTGCTGCCGCCTAAACAAGTG
ATCGGCCCCGACGAGAACGGAGTCAAGAAAGTTATTGAATACAAGTTTAA
CGATGACGGCAATAAGGTCAAAATAACCACCACCACGCGCGTGCGCAAGC
TCGCTAACGCTCGTCTCAGCAAACGCGCGCTGGAGAGGAGAAACTGGGCC
AAGTTCGGCGACGCCGTTCGCGAAGACGTCGGTAGCAGACTTACCATGGT
CTCCACCGAAGAGATCTTGCTGGAACGGCCTAGGGCTCCTGGTAGCAAAC
CAGAAGAGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGT
GGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTG
GACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCA
TTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACC
AAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGG
AACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACC
TATCGGAGGACACTCGGGAAACTGACTTGCTTGAGCTCTTCCGGCCTTTT
GGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAG
CAGAGGTTTTGGTTTTGTGAACTTTTGTGAACAAGGGAAGATGCTTCAAA
AGCTATCAACAAACTGAATGGGCTATGGGTAAGAACAATCTCCTTCCTCA
AAAGTTAAATGGGCCACCTCCCAGGACTAACTTAAATCGATTCAATTTTT
CCTTTGGACCTTTAACGGGGAAAACAAAAACAATTTTTGGGGTATTTATT
TTTAAACTAACCTTTAAGAATTGGAAAGGAACTTTGGGAGGGGTTTTGGT
TTAAAAAAAACTAAGGGGTTTTTCCCTACAAAAGAAACTTTTGGTACCTC
CAAAAATATTTTTAAATTTTTTGGCCCCGATGAAGGTTTCAAAAGGGGTT
TTTTTTCTAAGTGTTTTTTTTTTGTTTTTTTTTCTATA
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