DY256770

Overview
NameDY256770
Unique NameDY256770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROYA (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila yakuba GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.856e-26
Identity = 76/223 (34.08%), Postives = 117/223 (52.47%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++    MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-LMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROER (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila erecta GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.856e-26
Identity = 76/223 (34.08%), Postives = 117/223 (52.47%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI+++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++    MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGHKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIIMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-LMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROER (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila erecta GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.287e-25
Identity = 79/228 (34.65%), Postives = 120/228 (52.63%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            E   K V EYKFNDDG KVK+    ++ K     + K    RR+W KFGD++ +  G  S+ TM S EEI ++     GSK  E     ++    GK    +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G       R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ TG+ +GF +V+F
Sbjct:   28 EGDYKYVTEYKFNDDGKKVKVVRTFKIEKQI---VPKAVARRRSWVKFGDSLLDKPGPNSQTTMAS-EEIFMQ---FIGSK--EFDQTHETQLDPGKN---IAKCRICN--GEHWSVNCPYKGTSMDSKTMMETKANAAAAAAVSDPSKMGKYVPPFMKDGGGGSGGKNWGRGRDRDDSSAVRISNLSESMTEADLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHF 241          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROSI (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila simulans GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.287e-25
Identity = 76/223 (34.08%), Postives = 116/223 (52.02%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI ++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++    MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGQKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIFMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-MMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G1_DROSE (Eukaryotic translation initiation factor 3 subunit G-1 OS=Drosophila sechellia GN=eIF3-S4-1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.287e-25
Identity = 76/223 (34.08%), Postives = 116/223 (52.02%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            ENG K V EYK+N D  K K+    R  K++   + K   +RR W KFG++  +  G  S+ TMVS EEI ++   +     +E + A D L    K    +  CR C   G+HW+  CP+K  A      ++K               G YVPP ++  +++    MR R+D  ++R++NLSE   E DL EL +  G  S++Y+A D+ TG+ +GF +V+F
Sbjct:   30 ENGQKYVTEYKYNKDDKKTKVV---RTYKISKQVVPKTVAKRRTWTKFGESKNDKPGPNSQTTMVS-EEIFMQFLNS-----KEDEKANDPLLDPTKN---IAKCRICN--GEHWSVNCPYKGTAMDTN-MMEKKASAAAAAAVDAPKSGKYVPPFLK-DSQKGALGMRGRDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHF 236          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROME (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila melanogaster GN=eIF3-S4-2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.196e-25
Identity = 79/224 (35.27%), Postives = 119/224 (53.12%), Query Frame = 3
Query:  225 KKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            K V EYKFNDDG KVK+    ++ K     + K    RRNW KFGD+  +  G  S+ TM S EEI ++     GSK  +         QL  G  +   CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G   +G+      R R+D ++VR++NLSE   ETDL EL +  G  +++Y+A ++ +G+ +GF +V+F
Sbjct:   32 KYVTEYKFNDDGKKVKVVRTFKIEKQI---VPKAVARRRNWVKFGDSRSDKPGPNSQTTMAS-EEIFMQ---FIGSKDFDQTHE----TQLDPGKNIAK-CRICN--GEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHF 241          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROYA (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila yakuba GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.745e-25
Identity = 79/228 (34.65%), Postives = 118/228 (51.75%), Query Frame = 3
Query:  213 ENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            E   K V EYKFNDDG KVK+    ++ K     + K    RR+W KFGD+  +  G  S+ TM S EEI ++     GSK  E     ++    GK    +  CR C   G+HW+  CP+K  +  ++T ++              +K G YVPP M+ G    G       R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ TG+ +GF +V+F
Sbjct:   28 EGDYKYVTEYKFNDDGKKVKVVRTFKIEKQI---VPKAVARRRSWVKFGDSRLDKPGPNSQTTMAS-EEIFMQ---FIGSK--EFDQTHETQLDPGKN---IAKCRICN--GEHWSVNCPYKGTSMDSKTMMETKANAAAAAAISDPSKTGKYVPPFMKDGGGGPGGKNWGRGRERDDSSAVRISNLSESMTEADLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHF 241          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_MAGGR (Eukaryotic translation initiation factor 3 subunit G OS=Magnaporthe grisea GN=TIF35 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.918e-25
Identity = 76/255 (29.80%), Postives = 125/255 (49.02%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRV---RKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAA-GDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKP------------XXXXXXXXXXXXTKGTYVPPGMRAGAER-------TGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P+ ++  D  G K +I ++FND G KVK     R+   R++ N R++    ER+ W KFG + ++  G      S  E ++ RP A   K ++ ++   ++ A   K     + CR C   G+H+T+RCP+KD  AP                                 KG+YVPP +R   +         G     R+D  ++RVTN+SE   E +L ++F  FG V+RV++A D+ TG+++GF F++F ++
Sbjct:   28 PQTIVNKD--GTKTIISWRFNDQGQKVKTTRRVRLTTHREVVNPRVA----ERKKWEKFGLSAKDGPGPASDTTSVGENIIFRPSANWRKDQKDESKDANANAMKDKLKDKKVKCRICN--GEHFTARCPYKDTMAPIGEAAPAGGVGGGGDDEGGILSAPGAAGGAGAKKGSYVPPALRGDRKEGEKMGGGAGGKYGERDDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADR 274          

HSP 2 Score: 22.3274 bits (46), Expect = 3.918e-25
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 2
Query:  884 REDASKAINKLNG 922
            REDA KA NK++G
Sbjct:  274 REDAVKACNKMDG 286          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROVI (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila virilis GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.090e-24
Identity = 77/231 (33.33%), Postives = 119/231 (51.52%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            P K+ +  D    K V EYKFND+G K+K+    ++ K     +S+   +RRNW KFGD+  +  G +  T    +EIL+      GSK  E   A D L      G  +  CR C   G+HW+ +CP+K  +   E+   K               G YVPP ++ GA+      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F
Sbjct:   22 PSKEYVDGD---YKHVTEYKFNDEGKKIKVVRSFKIEKKI---VSRAVAKRRNWVKFGDSKLDKPGPNSYTTKVADEILMNYM---GSKDFEH--AQDPL----DAGKPMAKCRICN--GEHWSVKCPYKGTSMDMES---KAIAAATAAVGETNKTGKYVPPFLKDGAKG-----RERDDSSAVRISNLSESMTEDDLEELVKKIGPYTKMYLAREKNSGLCKGFAYVHF 227          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EI3G2_DROMO (Eukaryotic translation initiation factor 3 subunit G-2 OS=Drosophila mojavensis GN=eIF3-S4-2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.063e-24
Identity = 75/232 (32.33%), Postives = 119/232 (51.29%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKP-EETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            P K+ +  D    K V EYKFND+G K+K+    ++ K     +S+   +RRNW KFGD+  +  G +  T    +EIL+      GSK  E T+   D+   + K       CR C   G+HW+ +CP+K  +   E+   K               G YVPP ++ G +      R R+D ++VR++NLSE   E DL EL +  G  +++Y+A ++ +G+ +GF +V+F
Sbjct:   22 PSKEHVDGD---YKHVTEYKFNDEGKKIKVVRSFKIEKKI---VSRAVAKRRNWTKFGDSKLDKPGPNSYTTKVADEILMNYM---GSKDFEHTQDPLDASKPIAK-------CRICN--GEHWSVKCPYKGTSMDIES---KAIAAATAAVGETNKAGKYVPPFLKEGGKG-----RERDDSSAVRISNLSESMTEDDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHF 227          
The following BLAST results are available for this feature:
BLAST of DY256770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
EI3G1_DROYA9.856e-2634.08Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROER9.856e-2634.08Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROER1.287e-2534.65Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROSI1.287e-2534.08Eukaryotic translation initiation factor 3 subunit... [more]
EI3G1_DROSE1.287e-2534.08Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROME2.196e-2535.27Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROYA3.745e-2534.65Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_MAGGR3.918e-2529.80Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROVI1.090e-2433.33Eukaryotic translation initiation factor 3 subunit... [more]
EI3G2_DROMO7.063e-2432.33Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAA2AD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256770 ID=DY256770; Name=DY256770; organism=Citrus clementina; type=EST; length=1238bp
GTTTCACAAAAAATCGAAATCTCAAACCCTAAAACGCTTTGTCTCGCAAC
CTCTCCAACGCTTGTGTTTTTCTTAATCTGATTCATTCGAAAAAGATGTC
GGTTTCGACTCAAAATCCGACCCAACCAAAGCTCCGTTGGAGCGAACTGG
ACGAAGAAGACGGCGAGGATTTGGACTTCCTGCTGCCGCCTAAACAAGTG
ATCGGCCCCGACGAGAACGGAGTCAAGAAAGTTATTGAATACAAGTTTAA
CGATGACGGCAATAAGGTCAAAATAACCACCACCACGCGCGTGCGCAAGC
TCGCTAACGCTCGTCTCAGCAAACGCGCGCTGGAGAGGAGAAACTGGGCC
AAGTTCGGCGACGCCGTTCGCGAAGACGTCGGTAGCAGACTTACCATGGT
CTCCACCGAAGAGATCTTGCTGGAACGGCCTAGGGCTCCTGGTAGCAAAC
CAGAAGAGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGT
GGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTG
GACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCA
TTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACC
AAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGG
AACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACC
TATCGGAGGACACTCGGGAAACTGACTTGCTTGAGCTCTTCCGGCCTTTT
GGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAG
CAGAGGTTTTGGTTTTGTGAACTTTTGTGAACAAGGGAAGATGCTTCAAA
AGCTATCAACAAACTGAATGGGCTATGGGTAAGAACAATCTCCTTCCTCA
AAAGTTAAATGGGCCACCTCCCAGGACTAACTTAAATCGATTCAATTTTT
CCTTTGGACCTTTAACGGGGAAAACAAAAACAATTTTTGGGGTATTTATT
TTTAAACTAACCTTTAAGAATTGGAAAGGAACTTTGGGAGGGGTTTTGGT
TTAAAAAAAACTAAGGGGTTTTTCCCTACAAAAGAAACTTTTGGTACCTC
CAAAAATATTTTTAAATTTTTTGGCCCCGATGAAGGTTTCAAAAGGGGTT
TTTTTTCTAAGTGTTTTTTTTTTGTTTTTTTTTCTATA
back to top