DY256770

Overview
NameDY256770
Unique NameDY256770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_LODEL (Eukaryotic translation initiation factor 3 subunit G OS=Lodderomyces elongisporus GN=TIF35 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.791e-18
Identity = 71/238 (29.83%), Postives = 107/238 (44.96%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMV-CRTCGKKGDHWTSRCPFKDL--AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLL--ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P   +  PD  G K VI ++ N DG KVKI    +   +   ++     +R+NWAK+G       G   +     E  ++       K  E K   D   +      V  + CR CG  GDH+T++CPFKD   A+       +P            + G Y+P  +R  A         R+D  +++V+ L+    E D+L  ELF  FG + RV V  D++TG SRGF +V+F  +
Sbjct:   18 PADIIQNPD--GTKTVITFRTNQDGKKVKITQKIK-EVIVREKVHPLIAQRKNWAKYGKEKHSSPGPDTSTTQLGE-KVDLKLGLSWKQVEKKEEEDKAQERASRVVVQTIKCRVCG--GDHYTAKCPFKDTLGASTLNGGTPEPGSEGAGDADAVTSTGRYIPRHLRPDANGNIPTREARDDSTTLKVSQLNTFVDE-DMLRNELFARFGPLQRVTVVRDRETGESRGFAYVSFATE 248          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_DEBHA (Eukaryotic translation initiation factor 3 subunit G OS=Debaryomyces hansenii GN=TIF35 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.685e-17
Identity = 74/253 (29.25%), Postives = 116/253 (45.85%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMR--AGAERTGTDMRRRNDENSVRVTNLSEDTRETDLL--ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQGKMLQKLS-TN*MGY 926
            P   I  + +G K V+ Y+ N +G KVKI    +  K+   ++     +R+NWAK+G       G  +R T +  +  L         + +E ++  +  AQL     +   CRTCG  GDH+TS+CPFKD      T                   G YVP  +R  A       D++ R+D  +++++ L+    E D+L  EL   +G   R  V  +++TG SRGF +V F  + K  + L+  N  GY
Sbjct:   17 PTPEITTNPDGTKTVVSYRLNANGQKVKITQKIKEVKVKE-KVHPLIAQRKNWAKYGKEKNTPPGPDTRTTQLGEKVELKLGTSWKEIEKQEEESKEEQKAQLVSTQRIK--CRTCG--GDHFTSKCPFKDTLISDSTDASNAATPEPADDGMN-APGKYVPRHLRKDANGNMPAKDLKDRDDSTTLKISQLNSIVDE-DMLRNELLGRYGPFQRAIVVRNRETGESRGFAYVTFATESKAEEALNDLNGKGY 262          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_YARLI (Eukaryotic translation initiation factor 3 subunit G OS=Yarrowia lipolytica GN=TIF35 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.874e-17
Identity = 71/240 (29.58%), Postives = 113/240 (47.08%), Query Frame = 3
Query:  201 IGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRAL----ERRNWAKFGDAVREDVG-SRLTMVSTEEILLE---RPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMR-------AGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            I  + +G K ++ ++  DDG K K     R   + N  ++++ L    ER  W K+G  +    G +R+T    E+I+     +   P  + EE +AA  +  ++G+   V   CR C  +G H+TS+CP+K+    +                     G YVPP +R        G           +DE ++RVTNLSE+  + DL  +F  +G ++RVYVA D+ TG  RGF FV +
Sbjct:   34 ITQNADGTKTIVTHRM-DDGKKYK-----RSVTIKNQSVTEKVLNCVAERSKWTKYGKELGAPPGPNRMTTTIGEDIVFVLGLKSDQPEEEVEEEEAAA-AAPRVGEDKGVK--CRLC--QGPHFTSKCPYKETLGGSTAAGGMGRSLGGDEPAGAAKTGGYVPPHLRNKGPGGPGGPGGAAGGRSDDDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTY 262          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_VANPO (Eukaryotic translation initiation factor 3 subunit G OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF35 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.403e-17
Identity = 76/243 (31.28%), Postives = 114/243 (46.91%), Query Frame = 3
Query:  216 NGVKKVIEYKFNDDGNKVKIXXXXRVRKL-ANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLA----------APAET---FIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            +G K +I Y+  ++G K KI    +VR++  + ++ K    R+ WAK+G+      G +  T    EE+ L   R    K EE        A++   G  ++ CR CG    H+T  CPFK +           AP E     ++ P              G YVPP  RAGA+   +D     R R+D  ++++T L+E+  ET L E L  PFG + RV V  +++TG SRG  FV F  +
Sbjct:   14 DGTKTIITYRV-ENGQKFKITQ--KVREVHVSEKVHKAVASRKQWAKYGEERNAPPGPNHSTTQLGEEVYLRLSRNWKQKEEEETEK----AKIKSDG--IISCRLCGNA--HYTMNCPFKSIMSDIAALEDPNAPIEVGSNAVEAPVETASSAAAV--ASGKYVPPSRRAGAKDPSSDAYRDSRERDDMATLKITQLNENADETTLREELLFPFGNIPRVVVVRNRETGRSRGLAFVTFSSE 243          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_CANGA (Eukaryotic translation initiation factor 3 subunit G OS=Candida glabrata GN=TIF35 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.403e-17
Identity = 76/252 (30.16%), Postives = 111/252 (44.05%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG---SRLTMVSTEEILLERP--RAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDK---------PXXXXXXXXXXXXTK-GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLL-ELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P+ +  PD  G K +I YK  ++G K KI    R  K+   R+ +   ERR+WAKFG       G   S      T E+LL+R   +   ++ ++ KA+              + CR CG    H+T  CPFK + +      D          P            T  G YVPP  RAGA    +D     R R+D  ++++  L+E+  E  L  EL  PF  + +V V  +++TG SRG  FV F  +
Sbjct:    6 PEIIENPD--GTKSIITYK-TENGEKYKIIQKVRDVKITE-RVHRSVAERRSWAKFGAEKNSPPGPNNSTTQFGETVELLLDRNWRKIIEARTQKLKASASKT----------ITCRLCGNA--HYTMNCPFKTILSEISALEDPAAAAAGPGLPEEVPAGKADSGITATGAYVPPSRRAGARDPSSDAYRDARERDDSCTLKILQLNENADENTLRNELLFPFEPIQKVVVVRNKETGRSRGLAFVTFINE 241          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_YEAST (Eukaryotic translation initiation factor 3 subunit G OS=Saccharomyces cerevisiae GN=TIF35 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.426e-16
Identity = 77/249 (30.92%), Postives = 111/249 (44.58%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-----------GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P+++I  + +G + +I YK  +DG K KI    +  K+   ++ K   ER+NW K+G       G S +T    EE+ L   R    K  E +      A L K G   + CR CG   DH T  CPFK + +      D P             K           G YVPP  RAGA    +D     R R+D  ++++  ++E+  E  L E L  PF  + RV V  +++TG SRG  FV F  +
Sbjct:    6 PEEII-ENADGSRSIITYKI-EDGVKYKITQKVKEVKVLE-KVHKSVAERKNWHKYGSEKGSPAGPSAVTARLGEEVELRLSR--NWKQAEEERIQKEKASLTKTG---LQCRLCGN--DHMTMNCPFKTILSELSALED-PATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDAYRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSE 243          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_YEAS7 (Eukaryotic translation initiation factor 3 subunit G OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF35 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.426e-16
Identity = 77/249 (30.92%), Postives = 111/249 (44.58%), Query Frame = 3
Query:  189 PKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVG-SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTK-----------GTYVPPGMRAGAERTGTDM----RRRNDENSVRVTNLSEDTRETDLLE-LFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQ 884
            P+++I  + +G + +I YK  +DG K KI    +  K+   ++ K   ER+NW K+G       G S +T    EE+ L   R    K  E +      A L K G   + CR CG   DH T  CPFK + +      D P             K           G YVPP  RAGA    +D     R R+D  ++++  ++E+  E  L E L  PF  + RV V  +++TG SRG  FV F  +
Sbjct:    6 PEEII-ENADGSRSIITYKI-EDGVKYKITQKVKEVKVLE-KVHKSVAERKNWHKYGSEKGSPAGPSAVTARLGEEVELRLSR--NWKQAEEERIQKEKASLTKTG---LQCRLCGN--DHMTMNCPFKTILSELSALED-PATSEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDAYRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSE 243          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_PICGU (Eukaryotic translation initiation factor 3 subunit G OS=Pichia guilliermondii GN=TIF35 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.433e-16
Identity = 76/262 (29.01%), Postives = 124/262 (47.33%), Query Frame = 3
Query:  186 PPKQVIGPDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRA----LERRNWAKFGDAVREDVG--SRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXT--KGTYVPPGMRAGAERTGTDM--RRRNDENSVRVTNLS----EDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFCEQGKMLQKLST-N*MGY 926
            P  +VI  + +G K VI Y+ N +G K++      ++K+   ++ ++       R+NW+K+G       G  +R T +     L         + EE +   +   Q+     +   CRTCG  G+H+TS+CPFKD      T I               T   G YVPP +R GA     DM  R R+D  +++++ L+    ED    +LL+ F P   + RV +  +++TG SRGF +V+F  + +  + L+T N  GY
Sbjct:   17 PAAEVIN-NPDGTKTVINYRMNANGQKIR-----HIQKIREVKVKEKVHPLIAMRKNWSKYGKEKDMPAGPDARTTQLGEVVELKLGTSWKEIEKEEEEQKAEQTQQIVSNQRIK--CRTCG--GNHFTSKCPFKD------TLISDSANTSAAATPEPDTDASGKYVPPSLRKGAGAV-RDMSGRDRDDSTTLKISQLNTFVDEDMLRNELLKRFHP---LQRVTIVRNRETGESRGFAYVSFVTERQAEEALNTLNGKGY 258          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_CAEEL (Eukaryotic translation initiation factor 3 subunit G OS=Caenorhabditis elegans GN=eif-3.G PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.690e-15
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 3
Query:  297 KLANARLSKRALERRNWAKFGDAVREDVGSRL-TMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMV-----CRTCGKKGDHWTSRCPFKDL-AAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            K+ N R+ K   +R+ W KFG    E  G ++ T    EE+ ++  R           AG+ +  + +            CR C K  DHW++ CP+K +     E   DK             T+   +  GMR    +     R R+DEN+ RVTNL ++  E +L +LF   G V R+++A D+ TG+ +GF FV F
Sbjct:   50 KVINKRVPKVVADRKKWVKFGSCKGEPAGPQVATTYVAEEVDMQFTR---------NRAGEQILDVQEDKQTAKTTSREHCRHC-KGNDHWSTHCPYKVMYQLDEEADADKD------------TEKDRMAMGMRPDGRQID---RNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224          
BLAST of DY256770 vs. ExPASy Swiss-Prot
Match: EIF3G_DICDI (Eukaryotic translation initiation factor 3 subunit G OS=Dictyostelium discoideum GN=eif3g PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.020e-11
Identity = 59/223 (26.46%), Postives = 99/223 (44.39%), Query Frame = 3
Query:  207 PDENGVKKVIEYKFNDDGNKVKIXXXXRVRKLANARLSKRALERRNWAKFGDAVREDVGSRLTMVSTEEILLERPRAPGSKPEETKAAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPFKDLAAPAETFIDKPXXXXXXXXXXXXTKGTYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTRETDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNF 875
            P E  ++ +++   ND G +VK+    +  ++   R +++  ER+ W KFG+   +  G   T    E+ L+   R    K EE                 ++ CR C K  +H+T++CP+KD        ++                  Y+ P +R G   +       +D  S+ V+NLS++  E DL ELF  FG VSRV +    + G S+GF +V +
Sbjct:   11 PIEKTIEVIVK---NDKGEEVKVIKRYQEYQITVKR-NRKVDERKKWKKFGECDNK-TGLENTAYGDEQFLV-LTRGAEVKEEEKD---------------VVKCRICKK--NHFTTKCPYKDA-------LELTTQPQKSEKEEKPISNKYIAPNLRGGYTGSAPS---GSDVPSIMVSNLSQNATEKDLYELFGQFGPVSRVSIPKSME-GSSKGFAYVTY 199          
The following BLAST results are available for this feature:
BLAST of DY256770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
EIF3G_LODEL5.791e-1829.83Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_DEBHA1.685e-1729.25Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_YARLI2.874e-1729.58Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_VANPO6.403e-1731.28Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CANGA6.403e-1730.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_YEAST1.426e-1630.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_YEAS71.426e-1630.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_PICGU2.433e-1629.01Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_CAEEL2.690e-1530.00Eukaryotic translation initiation factor 3 subunit... [more]
EIF3G_DICDI4.020e-1126.46Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256770 ID=DY256770; Name=DY256770; organism=Citrus clementina; type=EST; length=1238bp
GTTTCACAAAAAATCGAAATCTCAAACCCTAAAACGCTTTGTCTCGCAAC
CTCTCCAACGCTTGTGTTTTTCTTAATCTGATTCATTCGAAAAAGATGTC
GGTTTCGACTCAAAATCCGACCCAACCAAAGCTCCGTTGGAGCGAACTGG
ACGAAGAAGACGGCGAGGATTTGGACTTCCTGCTGCCGCCTAAACAAGTG
ATCGGCCCCGACGAGAACGGAGTCAAGAAAGTTATTGAATACAAGTTTAA
CGATGACGGCAATAAGGTCAAAATAACCACCACCACGCGCGTGCGCAAGC
TCGCTAACGCTCGTCTCAGCAAACGCGCGCTGGAGAGGAGAAACTGGGCC
AAGTTCGGCGACGCCGTTCGCGAAGACGTCGGTAGCAGACTTACCATGGT
CTCCACCGAAGAGATCTTGCTGGAACGGCCTAGGGCTCCTGGTAGCAAAC
CAGAAGAGACAAAGGCTGCAGGAGATTCCTTGGCGCAACTTGGGAAAGGT
GGTGCTGTTCTCATGGTGTGTAGGACTTGTGGTAAGAAGGGTGATCACTG
GACGTCAAGGTGCCCTTTCAAGGATCTTGCTGCTCCAGCTGAGACATTCA
TTGATAAACCAGCTGCATCAGAGACTGCAGCTGCTGCTGCTGGCGCGACC
AAGGGAACATATGTTCCTCCTGGCATGAGAGCAGGGGCGGAGAGAACTGG
AACTGATATGAGACGCAGGAATGATGAGAACTCTGTTAGGGTCACCAACC
TATCGGAGGACACTCGGGAAACTGACTTGCTTGAGCTCTTCCGGCCTTTT
GGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAGAAGACTGGCATAAG
CAGAGGTTTTGGTTTTGTGAACTTTTGTGAACAAGGGAAGATGCTTCAAA
AGCTATCAACAAACTGAATGGGCTATGGGTAAGAACAATCTCCTTCCTCA
AAAGTTAAATGGGCCACCTCCCAGGACTAACTTAAATCGATTCAATTTTT
CCTTTGGACCTTTAACGGGGAAAACAAAAACAATTTTTGGGGTATTTATT
TTTAAACTAACCTTTAAGAATTGGAAAGGAACTTTGGGAGGGGTTTTGGT
TTAAAAAAAACTAAGGGGTTTTTCCCTACAAAAGAAACTTTTGGTACCTC
CAAAAATATTTTTAAATTTTTTGGCCCCGATGAAGGTTTCAAAAGGGGTT
TTTTTTCTAAGTGTTTTTTTTTTGTTTTTTTTTCTATA
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