DY256774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.129e-28 Identity = 98/317 (30.91%), Postives = 158/317 (49.84%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G +IGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + V P K +E+ D+ IR N+ +A AKL+PAF KK G+ TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARTFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLANETWASGHLRDEVMVAH---VPPYKQFIER------DNNIRENSDLASYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGDIDMSKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHEWM (3-ketoacyl-CoA thiolase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadI PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.781e-28 Identity = 102/325 (31.38%), Postives = 158/325 (48.62%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL---CCNSIE 933 +V R C++ Q+ +VA +I G DIGIA G +S +V I V ++ K+ IF + +D L L MG T+E +A+ + ++R +QD G E++ T V P + I D+ IR N++I AKL+PAF +K GT TA ++ ++DGA A+LLM S A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATGARL CN ++ Sbjct: 94 SVTRACATSFQSTVNVAESIMTGNIDIGIAGGSDSSSVLPIGVSKKLAHGLVDLNKARSFGQKLAIFRRLGLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHSLATETWNSGNLAQEVM---TAHVPPY-----KAFIDRDNNIRENSSIESYAKLRPAFDRKHGTVTAATSTPLTDGASAILLMSESRAKALGYNPIGYIKSYAFSAIDVWEDMLMGPSYATPIALKRAGMELEDLTLIEMHEAFAAQALANMKMFASKKFAQEKLGRNRAIGEIDMNKFNVLGGSLAYGHPFAATGARLITQVCNELK 410
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.631e-28 Identity = 97/325 (29.85%), Postives = 151/325 (46.46%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-------------------------------VGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-PSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLG-----------------L*SEKVNVNGSARAPWHPLGATGARLCCNSI 930 +V R C++ Q A+V +I AG DIGIA G +S +V I V + V P V ++ + MG T+E +A+ G+TR+EQD G +DE++ T +P T V + D+ IR ++ +A AKL+PAF +K G+ TA N++ ++DG A+LLM A + G LG RSF+ +D M +GP+ A P A+ AG+ + D+ L +++EAFA+Q + +K + +K NV G + A HP ATGAR+ ++ Sbjct: 100 SVTRACATSFQTTANVVESIMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKLSLLRTLSLKDIAPVPPAVAEYSTG----ISMGQTAEQMAKSHGITREEQDALAHRSHTLAAKAWKDGLIQDEVM---TAFPEPYT-----VWLDHDNNIRHDSELASYAKLRPAFDRKYGSVTAANSTPLTDGGAALLLMSEKRAKELGYEPLGYIRSFAFSAIDVHHDMLMGPSYATPMALDKAGISLSDLTLIDMHEAFAAQTLSNVKMFASNKFARECLGRDKAIGEIDMDKFNVLGGSIAYGHPFAATGARMIIQTL 412
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 97/326 (29.75%), Postives = 158/326 (48.47%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV----------------VGQ---------------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR--SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLG-----------------L*SEKVNVNGSARAPWHPLGATGARLCCNSI 930 +V R C++ QA +VA +I AG +IGIA G +S +V I V +GQ V P V ++ L MG T+E +A+ G++R EQD GK + E++ T +P + IS D+ +R ++T+ AKL+PAF + G+ TA N++ ++DG AV+LM+ A + G+ ILG R +FSA+GV+ ++ +GP A +++ GL++ D+ L +++EAFA+Q + +K + +K NV G + A HP ATGAR+ ++ Sbjct: 93 SVTRACATSFQAAVNVAESIMAGTIEIGIAGGADSSSVLPIGVSKKLAANLLALSKTKTLGQKLNILKSLSFKDLMPVPPAVAEYSTG----LSMGQTAEQMAKTHGISRAEQDALAHRSHTLASQAWKEGKIQGEVM---TAFPEP-----YKKWISEDNNVRHDSTLEGYAKLRPAFDRQYGSVTAANSTPLTDGGAAVMLMREGKAKELGMEILGYIRGYAFSAIGVEKDML-MGPTYATAKVLENTGLELSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAIGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTL 405
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 97/317 (30.60%), Postives = 158/317 (49.84%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G +IGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + V P K +E+ D+ IR N+ ++ AKL+PAF KK G+ TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAH---VPPYKQFIER------DNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 97/317 (30.60%), Postives = 158/317 (49.84%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G +IGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + V P K +E+ D+ IR N+ ++ AKL+PAF KK G+ TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAH---VPPYKQFIER------DNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 97/317 (30.60%), Postives = 158/317 (49.84%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G +IGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + V P K +E+ D+ IR N+ ++ AKL+PAF KK G+ TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAH---VPPYKQFIER------DNNIRENSDLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 98/317 (30.91%), Postives = 157/317 (49.53%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G DIGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + + P + I D+ IR N+ + AKL+PAF K+ GT TA N++ ++DGA A++LM A G +G +S FSA+ V ++ +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSTVNVAESIMTGNIDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAH---IPPY-----KQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAINVWQDML-MGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 4.743e-28 Identity = 103/321 (32.09%), Postives = 155/321 (48.29%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDC--------------LLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIK----------KLG-------L*SEKVNVNGSARAPWHPLGATGARLCCNSI 930 +V+R C++ QAVA+V +I AG DI IA G +S +V I V ++ + +AR+ LLP MG T+E +A+ ++R+ QD GK E+ T V P +R D+ IR ++ +A AKLKP F + G+ TA NA+ ++DGA AVLLM+ A + GL LG RSF+ +D M +GP+ A P A+ AG+ + D+ L +++EAFA+Q + +K KLG + +K NV G + A HP ATGAR+ ++ Sbjct: 94 SVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRQLRVKDLLPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVF---TAHVPPYKAPLER-----DNNIRESSDLASYAKLKPVFDRVHGSVTAANATPLTDGAAAVLLMREGRARELGLEPLGYIRSFAFSAIDVWQDMLMGPSYATPLALDRAGITLSDLTLIDMHEAFAAQTLANLKMFASKEFAQSKLGRDQAIGEVDMDKFNVLGGSLAFGHPFAATGARMITQTL 406
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadI PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 6.194e-28 Identity = 96/316 (30.38%), Postives = 155/316 (49.05%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------------NPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G DIGIA G +S +V I V ++ K++IF + +D L L MG T+E +A+ + ++R +QD G +DE++ + + P + I D+ IR N+ + AKL+PAF K+ GT TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSTVNVAESIMTGNIDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLASETWASGHLRDEVMVAH---IPPY-----KQFIDRDNNIRENSVLESYAKLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRPIGEIDMSKFNVLGGSLAYGHPFAATGTRL 401 The following BLAST results are available for this feature:
BLAST of DY256774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256774 ID=DY256774; Name=DY256774; organism=Citrus clementina; type=EST; length=1241bpback to top |