DY256774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.354e-27 Identity = 97/316 (30.70%), Postives = 154/316 (48.73%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDC--------------LLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V R C++ Q+ +VA +I G +IGIA G +S +V I V ++ + +AR LLP MG T+E +A+ + ++R +QD G +DE++ + V P + I D+ IR N+++ AKL+PAF +K G+ TA N++ ++DGA AVLLM S A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL Sbjct: 94 SVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRLGLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSGHLRDEVMVAH---VPP-----YKSFIDRDNNIRENSSLDSYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSESRAKALGYEPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAKEKLGRDRAIGEIDMTKFNVLGGSLAYGHPFAATGTRL 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_ALTMD (3-ketoacyl-CoA thiolase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=fadI PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.015e-27 Identity = 96/316 (30.38%), Postives = 154/316 (48.73%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-------------VGQVNPKVEIFTQA--RDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIK----------KLG-------L*SEKVNVNGSARAPWHPLGATGARL 915 +V+R C++ Q+ ++A ++ AG +GIA G +S +V+ I V + K+ IF + RD L MG T+E +A+ ++R+EQD GK E++ T +P +R D+ +R ++ + AKL+P F KK G+ TA NA+ ++DGA AVL+M S A + G LG +S++ +D M +GP+ A P A+ AG+ ++D+ L E++EAFA+Q + +K KLG + +K NV GS+ A HP ATG R+ Sbjct: 94 SVSRACATSFQSTVNIAESMMAGTVQVGIAGGADSTSVSPIGVSKNLARALVDLQKTKTLGQKLNIFKRLSLRDLAPVPPAVAEYSTGLSMGQTAEQMAKTHQISREEQDKLAHRSHSLAAESWEAGKLSSEVM---TAYAEPYKAALER-----DNNVRFDSKLEGYAKLRPVFDKKYGSVTAANATPLTDGASAVLMMTESRAKELGYTPLGYIKSYAFAAIDVWEDMLMGPSYATPIALDRAGMTLNDLTLIEMHEAFAAQTLANVKMFASDKFAKEKLGRDKATGEIDMDKFNVMGSSIAYGHPFAATGTRM 401
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.945e-27 Identity = 97/322 (30.12%), Postives = 157/322 (48.76%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-------------VGQVNPKVEIFT--QARDCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLG-----------------L*SEKVNVNGSARAPWHPLGATGARLCCNSI 930 +V+R C++ QAVA+VA ++ G GIA G +S +V I V + K+++F+ + RD L L MG ++E +A+ G+TR++QD G DE++ T V P D+ +R + + D A+L+PAF ++ GT TA N++ ++DGA AV+LM S A + G+ LG RS FSA+ V ++ +GP+ A P A+ AG+ + D+ L +++EAFA+Q + +K + E+ NV G + A HP ATGAR+ ++ Sbjct: 94 SVSRACATSFQAVANVAESLMIGHIQAGIAGGADSSSVLPIGVSKKLARLLVDASKTRSLAQKLKLFSGLRPRDLLPVAPAVAEYSTGLRMGDSAEQMAKNHGITREQQDALALRSHQRAAHAWQQGLLNDEVM---TACVPPW-----EQPFEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRSYAFSAIDVRQDML-LGPSYASPLALDRAGITLADLSLIDMHEAFAAQTLANLKMFADERFAREVLDRPRALGEVDMERFNVLGGSIAYGHPFAATGARMITQTL 406
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: ECHB_BOVIN (Trifunctional enzyme subunit beta, mitochondrial OS=Bos taurus GN=HADHB PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.945e-27 Identity = 107/353 (30.31%), Postives = 158/353 (44.76%), Query Frame = 1 Query: 7 IVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-----------------------VNSISVVGQVN--------PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIK----------------KLGL*S-EKVNVNGSARAPWHPLGATGARL 915 I+ GTV+ T + R AA AGF + P TV C S QA+ I +G D+ +A G+E M+ +S++ + P V F+ + MG +++ +A F ++R+EQD G D ++P V R T++ D+GIRP++ + +AKLKPAF K GT TA N+S ++DGA AVL+M A+ G R F V DP + +GP A P ++ AGL ++DI +FE +EAF+ Q + +K K+GL EK N G + + HP GATG RL Sbjct: 102 IIFGTVIQEVKTSNV-AREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLNFLSPELPAVSEFSTSET----MGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSD-VVPFK---------VPGRDTVTQDNGIRPSS-LDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDVFEFHEAFSGQILANLKAMDSDWFAQNYMGRKAKVGLPPLEKFNNWGGSLSLGHPFGATGCRL 438
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.526e-26 Identity = 94/325 (28.92%), Postives = 156/325 (48.00%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQAR---------------DCL------------LPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARL---CCNSIE 933 +V R C++ Q+ +VA +I G +IG+A G +S +V I V ++ + +AR D + L MG T+E +A+ + ++R +QD G ++E++ T + P + I D+ IR N+ + AKL+PAF +K GT TA N++ ++DGA A++LM A G +G +S++ +D M +GP+ A P A+K AG++++D+ L E++EAFA+Q + + +KLG + K NV G + A HP ATG RL CN ++ Sbjct: 94 SVTRACATSFQSAVNVAESIMTGNIEIGLAGGSDSSSVLPIGVSKKLAHALVDLNKARTFKQKFAIARRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNSGHLRNEVM---TAHIPP-----YKQFIDRDNNIRENSVLESYAKLRPAFDRKHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCNELK 410
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: ECHB_RAT (Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus GN=Hadhb PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.526e-26 Identity = 109/352 (30.97%), Postives = 158/352 (44.89%), Query Frame = 1 Query: 7 IVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----------------VNSISVVGQVNPKVEIFTQAR-DCLLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIK----------------KLGL*S-EKVNVNGSARAPWHPLGATGARL 915 I+ GTV+ T + R AA AGF + P TV C S QA+ I +G D+ +A G+E M+ +N + Q ++ + T+ R + L P MG +++ +A F V+R EQD G D I+P V + T+S D+GIRP++ + +AKLKPAF K GT TA N+S ++DGA A+L+M A+ G R F V DP + +GP A P ++ AGL ++DI FE +EAF+ Q + K K+G EK N+ G + + HP GATG RL Sbjct: 102 IIFGTVIQEVKTSNV-AREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLAQ---RLSLLTKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDKYALRSHSLAKKAQDEGHLSD-IVPFK---------VPGKDTVSKDNGIRPSS-LEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAQNYMGRKTKVGAPPLEKFNIWGGSLSLGHPFGATGCRL 438
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: ECHB_MOUSE (Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.993e-26 Identity = 108/352 (30.68%), Postives = 160/352 (45.45%), Query Frame = 1 Query: 7 IVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----------------VNSISVVGQVNPKVEIFTQAR-DCLLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV--------------YCIKKLGL*S---EKVNVNGSARAPWHPLGATGARL 915 I+ GTV+ T + R AA AGF + P TV C S QA+ I +G D+ +A G+E M+ +N +GQ ++ + ++ R + L P MG +++ +A F V+R EQD G D I+P V + T++ D+GIRP++ + +AKLKPAF K GT TA N+S ++DGA A+L+M A+ G R F V DP + +GP A P ++ AGL ++DI FE +EAF+ Q + Y +K + S EK N+ G + + HP GATG RL Sbjct: 102 IIFGTVIQEVKTSNV-AREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQ---RLSLLSKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLSD-IVPFK---------VPGKDTVTKDNGIRPSS-LEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAQNYMGRKTKVGSPPLEKFNIWGGSLSLGHPFGATGCRL 438
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADI_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadI PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.439e-26 Identity = 95/322 (29.50%), Postives = 161/322 (50.00%), Query Frame = 1 Query: 106 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDC--------------LLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YCIKKLG-------L*SEKVNVNGSARAPWHPLGATGARLCCNSI 930 +V+R C++ Q+ ++A A+ AG GIA G +S +V I V ++ + +A+ LLP MG T+E +A+ ++R++QD G DE++ T +P + +S D+ IR ++ I LAKLKP F +K G+ TA N++ ++DGA AV++M S A + GLP+LG RS F+A+ V+ ++ +GP+ + P A+ AG+ ++D+ L +++EAFA+Q + + +KLG + +K NV G + A HP ATG R+ ++ Sbjct: 94 SVSRACATSFQSAVNIAEAMVAGHIRGGIAGGADSSSVLPIGVSKRMARALVDLNKAKTLGQRFSILKRLGFKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDELTVRSHQKAHAAWEAGWLSDEVM---TAYPEPY-----KKHLSRDNNIRGDSQIEKLAKLKPVFDRKHGSVTAANSTPLTDGASAVMMMTESRAKELGLPVLGYLRSYAFAALQVEEDML-MGPSYSTPVALDRAGMSLNDLDLIDMHEAFAAQTLANMKMFASDKFAQEKLGRDKAIGEIDMDKFNVLGGSIAYGHPFAATGTRMITQTL 406
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.292e-25 Identity = 109/353 (30.88%), Postives = 161/353 (45.61%), Query Frame = 1 Query: 7 IVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT-------------VNSISVVGQVNPKVEIFTQ-ARDCLLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYV----------YC---IKKLG----L*SEKVNVNGSARAPWHPLGATGARLCCNS 927 I+ GTV+ T + R AA AG P+ +P TV C S A+ + G + IA G+E ++ + ++ V K++I Q ++ L P MG + + +A F V+R+EQD GKF D ++PV PKT I D+GIR +T + L+ LKPAF K GT TA NAS ++DGA A L+M A+ G R + V DP + + PA IP + AGL + D+ +FEI+EAFA Q + +C +K+ G + +K+N+ G + + HP GATG RL +S Sbjct: 73 IICGTVIQECKTSNI-AREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKKPKT-------IKEDNGIRVST-LEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHS 415
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: ECHB_PANTR (Trifunctional enzyme subunit beta, mitochondrial OS=Pan troglodytes GN=HADHB PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.758e-25 Identity = 108/352 (30.68%), Postives = 159/352 (45.17%), Query Frame = 1 Query: 7 IVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT----------------VNSISVVGQVNPKVEIFTQAR-DCLLP-------------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIK----------------KLGL*S-EKVNVNGSARAPWHPLGATGARL 915 I+ GTV+ T + R AA AGF + P TV C S QA+ I +G D+ +A G+E M+ +N +GQ ++ + ++ R + L P MG +++ +A F V+R EQD G D ++P V + T++ D+GIRP++ + +AKLKPAF K GT TA N+S ++DGA A+L+M A+ G R F V DP + +GP A P ++ AGL ++DI FE +EAF+ Q + K K+GL EK N G + + HP GATG RL Sbjct: 102 IIFGTVIQEVKTSNV-AREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMRKLMLDLNKAKSMGQ---RLSLISKFRFNFLAPELPAVSEFSTSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSD-VVPFK---------VPGKDTVTKDNGIRPSS-LEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSGQILANFKAMDSDWFAENYMGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRL 438 The following BLAST results are available for this feature:
BLAST of DY256774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256774 ID=DY256774; Name=DY256774; organism=Citrus clementina; type=EST; length=1241bpback to top |