DY256774
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.512e-45 Identity = 112/293 (38.23%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A+ G+ L V RS + GVDP++MG GP + A+K AGL + DI E+NEAFA+Q + +K L + EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.512e-45 Identity = 112/293 (38.23%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A+ G+ L V RS + GVDP++MG GP + A+K AGL + DI E+NEAFA+Q + +K L + EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 9.512e-45 Identity = 125/339 (36.87%), Postives = 176/339 (51.92%), Query Frame = 1 Query: 4 DIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN------PKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL*SE--KVNVNGSARAPWHPLGATGARLCCNSIE*KETSCQKMSI 966 D++ G G RM+A AG P VP TVNR C S L A+A A AIKAG + IA G+ESM+ + V+G+ K+E T + P M T+ENVA++FG+ R++QD G F EI+PV + + G + V I+ D+ R +TT+ LAKLK K +G+ TAGNAS ++DGA AVL+ Q L + + VG++P +MG PA AI +K A L +D + + E+NEAFA+Q + C + LGL + +VN NG A A HPLGA+GARL ++ E S K ++ Sbjct: 51 DVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVT---IPQRKG--EPVVIATDEHPRASTTLEGLAKLKGVVKPEGSVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYAL 383
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 125/339 (36.87%), Postives = 175/339 (51.62%), Query Frame = 1 Query: 4 DIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN------PKVEIFTQARDCLLP----------MGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL*SE--KVNVNGSARAPWHPLGATGARLCCNSIE*KETSCQKMSI 966 D++ G G RM+A AG P VP TVNR C S L A+A A AIKAG + IA G+ESM+ + V+G+ K+E T + P M T+ENVA++FG+ R++QD G F EI+PV + + G + V I D+ R +TT+ LAKLK K +G+ TAGNAS ++DGA AVL+ Q L + + VG++P +MG PA AI +K A L +D + + E+NEAFA+Q + C + LGL + +VN NG A A HPLGA+GARL ++ E S K ++ Sbjct: 51 DVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS-RAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVT---IPQRKG--EPVVIDTDEHPRASTTLEGLAKLKGVVKPEGSVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYAL 383
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 113/293 (38.57%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI D+ I G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ G ++ + V D+ IRP+TT+ LA LKPAF K GT TAG +SQ++DGA +++M A G+ + V RS + GVDP++MG GP A A+K AGL I DI FE+NEAFA+Q + +K L + +EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHM--GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ--------GYDENGFLKVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSIADIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 112/293 (38.23%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A+ G+ L V RS + GVDP++MG GP + A+K AGL + DI E+NEAFA+Q + +K L + EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 112/293 (38.23%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A+ G+ L V RS + GVDP++MG GP + A+K AGL + DI E+NEAFA+Q + +K L + EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMVVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 113/290 (38.97%), Postives = 160/290 (55.17%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QD GKFKDEIIP+ + G K D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A G+ + V RS + GVDP++MG GP A A+K AGL I+DI FE+NEAFA+Q + +K L + +EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGY---DENGFLK--LFDYDETIRPETTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 112/293 (38.23%), Postives = 161/293 (54.95%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISV---DDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M +S++ V+P + A MG+T+E + + G+TR++QDL GKFKDEIIP+ G ++ + V D+ IRP TT+ LA LKPAF K GT TAG +SQ++DGA +++M A+ G+ L V RS + GVDP++MG GP + A+K AGL + DI E+NEAFA+Q + +K L + EKVN++G A A HP G +GAR+ Sbjct: 74 RMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM--GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ--------GYDENGFLKVFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARI 356
BLAST of DY256774 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.242e-44 Identity = 119/290 (41.03%), Postives = 159/290 (54.83%), Query Frame = 1 Query: 58 RMAAFYAGFPETVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIILFEINEAFASQYVYCIKKLGL---*SEKVNVNGSARAPWHPLGATGARL 915 R AA A P +VP TVNR C S +QA+ D A I +G + G+E M +S +P + MG+T+E +A+ G++R+ QD G FK+EIIP D GV K+ + D+ IRP TT+ LA L+PAF GT TAG +S +SDGA A+L+M S A + GL RS + VG DP++MG GP A A+K AGL + DI +FE+NEAFA+Q + CIK LGL EK+N+NG A A HPLG +GAR+ Sbjct: 70 RNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMSGDAQACLVGGVEHMGHVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDAD---GVLKQ--FNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPAIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARI 352 The following BLAST results are available for this feature:
BLAST of DY256774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256774 ID=DY256774; Name=DY256774; organism=Citrus clementina; type=EST; length=1241bpback to top |