DY256792

Overview
NameDY256792
Unique NameDY256792
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16
Identity = 41/58 (70.69%), Postives = 48/58 (82.76%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 535
            YRGVR+RPWGKFAAEIRD K+  +R+WLGT++T E AA AYDRAA   RG +AKLNFP
Sbjct:  136 YRGVRQRPWGKFAAEIRDPKR-ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 2
Query:  353 RVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLI----ASNVEPQP 568
            R  YRGVR+RPWGK+AAEIRD  K  +R+WLGT+D  E AA AYD AA + RG+KAKLNFP  +     ++ E QP
Sbjct:  182 RRRYRGVRQRPWGKWAAEIRDPFK-AARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQP 256          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGS-KAKLNF 532
            YRGVRKRPWGKFAAEIRD  +NG R+WLGT+ T E AA+AYD+AA ++RG+ KA  NF
Sbjct:  110 YRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF 167          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 2
Query:  356 VNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 535
            V+YRGVRKRPWG++AAEIRD  K  SR+WLGT+DT E AA AYD AA + RG KAK NFP
Sbjct:   25 VHYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16
Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 2
Query:  269 STPHAP------PQAQASGFRLQKAA-----------TMTREIHVRVNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL 541
            STPH P         Q S   LQ AA              R    +  YRGVR+R WGK+ AEIR   +N  R+WLGTYDT E AA AYDRAA+K+RG  A+LNFP+L
Sbjct:   88 STPHPPLFSSTYDHHQTSELMLQAAAGSPAAAFAAALAAGRVTKKKKLYRGVRQRHWGKWVAEIR-LPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNL 194          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16
Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEPQP 568
            YRGVR+R WGK+ AEIR   +N +RLWLGT+DT E AALAYD+AA+K+RG  A+LNFP L   N E QP
Sbjct:   83 YRGVRQRHWGKWVAEIR-LPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDL-RHNDEYQP 149          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFP 535
            YRG+R+RPWGK+AAEIRD ++ G+R+WLGT+ T E AA AYD AA ++RGSKAK+NFP
Sbjct:  125 YRGIRQRPWGKWAAEIRDPRE-GARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFP 181          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL-IASNVEPQPHG 574
            YRG+R+RPWGK+AAEIRD  K G R+WLGT+ T + AA AYD AA K+RG KAKLNFP+  +    + +P G
Sbjct:   50 YRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGG 120          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 2
Query:  362 YRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSL 541
            YRGVR+R WGK+ AEIR   +N +RLWLGT+DT E AALAYD+AA+K+RG  A+LNFP+L
Sbjct:  152 YRGVRQRHWGKWVAEIR-LPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNL 210          
BLAST of DY256792 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.163e-15
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  356 VNYRGVRKRPWGKFAAEIRDRKKNGSRLWLGTYDTPEGAALAYDRAAFKMRGSKAKLNFPSLIASNVEPQPH 571
            + +RGVRKRPWG+FAAEIRD  K  +R+WLGT+D+ E AA AYD AA  +RG KAK NFP  I S+  P P+
Sbjct:   26 IRFRGVRKRPWGRFAAEIRDPWKK-ARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFP--IDSSSPPPPN 94          
The following BLAST results are available for this feature:
BLAST of DY256792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
EF109_ARATH1.373e-1670.69Ethylene-responsive transcription factor ERF109 OS... [more]
ABR1_ARATH2.342e-1657.89Ethylene-responsive transcription factor ABR1 OS=A... [more]
ERF91_ARATH3.059e-1668.97Ethylene-responsive transcription factor ERF091 OS... [more]
ERF4_NICSY3.059e-1670.00Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF61_ARATH5.218e-1648.15Ethylene-responsive transcription factor ERF061 OS... [more]
ERF58_ARATH5.218e-1663.77Ethylene-responsive transcription factor ERF058 OS... [more]
RA212_ARATH6.815e-1667.24Ethylene-responsive transcription factor RAP2-12 O... [more]
ERF71_ARATH6.815e-1658.33Ethylene-responsive transcription factor ERF071 OS... [more]
RAP24_ARATH8.901e-1666.67Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF82_ARATH1.163e-1559.72Ethylene-responsive transcription factor 3 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AG11ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256792 ID=DY256792; Name=DY256792; organism=Citrus clementina; type=EST; length=712bp
GGGCGCTGCAATTAATTGAATCATACACAGTACAGATCACTCTCAAATCC
AAGAAAACACAGTAAAATCATAACATCATATTCCCCGGCAAATTAAATTC
AAGCTTAACTTTTCGTTTACAGATTAAAGTTTCAGCTTCAGTGATACACA
TAAACTCTTGAACTCAAGCCCTAACTCTGATTCAATCCATTGAAATATGG
AGGATTGCGAAGCTTTACACGACACTGTTAAGGAGGGGTGGATTTCGTTT
GATCAGCTTGATGGAAAGTCGACGCCTCATGCTCCGCCTCAGGCTCAGGC
TAGTGGATTTCGTTTACAGAAGGCAGCCACGATGACACGTGAGATTCACG
TGCGTGTAAATTATCGAGGTGTGAGGAAGAGGCCGTGGGGAAAGTTTGCT
GCGGAGATAAGGGATCGTAAAAAGAATGGCTCACGACTTTGGCTGGGGAC
CTATGATACGCCTGAGGGTGCTGCGTTGGCTTATGATAGAGCCGCTTTCA
AGATGCGCGGCTCAAAAGCCAAGCTTAATTTTCCAAGCCTCATTGCCTCA
AACGTTGAGCCTCAGCCTCACGGAATTACGAAAAAGAATATGGCTTCTTC
TTCGTCATCCTCATCCATCACTGCAGATTAAATCTCCGAATTTGGGTTTA
ATTAGCTGAGAAATAATATTTCTACTTATTTTTGAAGTAATTGACATTAA
TTCGCCTTTTAC
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