DY256817

Overview
NameDY256817
Unique NameDY256817
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: AAT_MYCBO (Probable aspartate aminotransferase OS=Mycobacterium bovis GN=aspC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 48/180 (26.67%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  195 INLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            +N+G   P  F+ PD +    IQA+   +  Y+   G+     A+ +R++   G       +V + +G ++ I  T+  L++ GD+V++ +P Y  + A+ S+AG   +  +      +   I +L+S I++ T+A+++  P+NPTG +++ E L  +  L  ++ +L+ +DE+YDK+ +
Sbjct:   62 LNIGNPAPFGFEAPDVIMRDIIQALPYAQG-YSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILY 240          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 45/180 (25.00%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  195 INLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            +N+G   P  F+ PD +    ++ +   +  Y    G+     AI  ++ +  G+      +V + +G ++ I   +  L+N GDEV++  P Y  + A ++++G K +  +      +   I+++K+ ++  T+AI++  P+NPTG ++++E L  I  +  +N++++F+DE+YDK+ +
Sbjct:   38 LNIGNPAPFGFEAPDEILVDVLRNLPSAQG-YCDSKGLYSARKAIV-QYYQSKGILGATVNDVYIGNGVSELITMAMQALLNDGDEVLVPMPDYPLWTAAVTLSGGKAVHYLCDEDANWFPTIDDIKAKVNAKTKAIVIINPNNPTGAVYSKELLQEIVEIARQNNLIIFADEIYDKILY 215          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: DAPT2_ANAVT (LL-diaminopimelate aminotransferase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dapL2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 54/212 (25.47%), Postives = 101/212 (47.64%), Query Frame = 3
Query:  117 QVAKCLEKFKTTIFTQMS-----MLAIKHGAINLGQGFPNFDGPDFVKDAAIQAIRDGKNQ-YARGHGVPEFNSAIASRFKKDSGL-EVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            Q AK LEK    +F +++     ++A     IN+G G P+   P  +  A  +AI +  N  Y    G  EF  A     ++  G+ +++P  EV  + G  +AI  T L  +  GD  ++  P Y  Y  +   AG +   + L+     +P ++ +   +++  + + +N P+NPTG + T E    + + C ++ +L+  D  Y ++A+
Sbjct:    2 QFAKRLEKIPPYLFAEINRKREALIAQGVDIINIGVGDPDKPTPAHILQAMREAIDEASNHNYPPYEGTQEFREAAVKWMERRFGVVDLNPNTEVVSSIGSKEAIHNTFLAFVEAGDYTLIPDPGYPVYRTSTIFAGGEPFTMPLKAENKFLPDLDLIPEEVARKAKMLWVNYPNNPTGALATLEFFEELVAFCQQHSILLCHDHAYSEMAY 213          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: ATTY_RAT (Tyrosine aminotransferase OS=Rattus norvegicus GN=Tat PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 3
Query:  213 FPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            F N      V  A   A+  GK N YA   G       +AS +   ++ LE    K+V +TSGC+QAI   +  L NPG  +++  P +  Y       G ++K   L P + + I +++L+S I + T  +++N P NP G +F++  L  I ++     V + +DE+Y  + F
Sbjct:   84 FGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCHEAPLEA---KDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVF 255          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: ATTY_MOUSE (Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 3
Query:  213 FPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            F N      V  A   A+  GK N YA   G       +AS +   ++ LE    K+V +TSGC+QAI   +  L NPG  +++  P +  Y       G ++K   L P + + I +++L+S I + T  +++N P NP G +F++  L  I ++     V + +DE+Y  + F
Sbjct:   84 FGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPEAPLEA---KDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVF 255          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: DAPAT_NATTJ (LL-diaminopimelate aminotransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=dapL PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 54/211 (25.59%), Postives = 96/211 (45.50%), Query Frame = 3
Query:  117 QVAKCLEKFKTTIFTQMSMLAIKHGA-----INLGQGFPNFDGPDFVKDAAIQAIRDGKNQ-YARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPEFAIP-IEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            Q A  L      +F  +  +  K  A     I LG G P    P+ +  AA Q +  G+N  Y    G+ +   AI   ++   G+E++P++E+    G  + IA     ++NPGD   +  P Y  Y+    +AG     + L+     IP +E +  +     + + MN P+NPT  + +++  +     C +N +L+ +D  Y ++AF
Sbjct:    2 QSAHRLNNLPPYLFADLDKMVQKEQAKGKEIIKLGIGDPGMKPPEGIIKAATQEMYKGENHGYPAYDGIDKLKHAIKEYYQSRFGVELNPDREILTLIGSKEGIANISQAILNPGDINFIPDPSYPVYKNGTILAGGTPHSMPLKQDNGFIPELESIPQSRLSKGKIVFMNYPNNPTSAVASKDFYSHAVKFCQKNKLLLCNDAAYSEIAF 212          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: DAPAT_DESDG (LL-diaminopimelate aminotransferase OS=Desulfovibrio desulfuricans (strain G20) GN=dapL PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 52/180 (28.89%), Postives = 86/180 (47.78%), Query Frame = 3
Query:  195 INLGQGFPNFDGPDFVKDAAIQAIRDGKN-QYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYE-ATLSMAGAKIKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            I+LG G P+   PDFV +A  +A     N QY    G+  F   +A+ +K+   +E+DP+ EV    G  + IA      +NPGD V++  P Y  Y  A+  M G   +   L   +F   ++ +     +  R I +N P+NPT  M  R     +  +  +++V+V  D  Y ++ +
Sbjct:   36 ISLGIGDPDMPTPDFVIEALKKAAEKPANHQYPSYTGMLAFRQEVANWYKRRYAVELDPKTEVLTLIGSKEGIAHFPTAFVNPGDLVLVCPPCYPVYAIASRFMGGVVQELPLLEENDFLPDLDAVDEATWEKARCIFVNYPNNPTAAMAPRSFFEKLIGIARKHNVIVVHDAAYTEMYY 215          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: ATTY_BOVIN (Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 3
Query:  213 FPNFDGPDFVKDAAIQAIRDGK-NQYARGHGVPEFNSAIASRFK-KDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKCITLRPPE-FAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            F N      V  A   A+  GK N Y    G       +AS +   ++ LE    K+V +TSGC+QAI   +  L NPG  +++  P +  Y       G ++K   L P + + I +++L+S I + T  +++N P NP G +F+R  L  I ++     V + +DE+Y  + F
Sbjct:   77 FGNLPTDPEVTQAMKDALDSGKFNGYVPSIGYLSSREEVASYYHCPEAPLEA---KDVILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLLPEKNWEIDLKQLESLIDEKTVCLIVNNPSNPCGSVFSRRHLQKILAVAARQCVPILADEIYGDMVF 248          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: YFBQ_SHIFL (Uncharacterized aminotransferase yfbQ OS=Shigella flexneri GN=yfbQ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 45/180 (25.00%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  195 INLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            +N+G   P  FD PD +    I+ +   +  Y    G+     AI   ++     +V  E ++ + +G ++ I   +  L+N GDE+++ AP Y  + A +S++  K +  +     ++   ++++++ I+  TR I++  P+NPTG ++++E L  I  +  ++++++F+DE+YDK+ +
Sbjct:   38 LNIGNPAPFGFDAPDEILVDVIRNLPTAQG-YCDSKGLYSARKAIMQHYQARGMRDVTVE-DIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY 215          
BLAST of DY256817 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOLI (Uncharacterized aminotransferase yfbQ OS=Escherichia coli (strain K12) GN=yfbQ PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14
Identity = 45/180 (25.00%), Postives = 99/180 (55.00%), Query Frame = 3
Query:  195 INLGQGFP-NFDGPDFVKDAAIQAIRDGKNQYARGHGVPEFNSAIASRFKKDSGLEVDPEKEVTVTSGCTQAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAK-IKCITLRPPEFAIPIEELKSTISKNTRAILMNTPHNPTGKMFTREELNVIASLCIENDVLVFSDEVYDKLAF 728
            +N+G   P  FD PD +    I+ +   +  Y    G+     AI   ++     +V  E ++ + +G ++ I   +  L+N GDE+++ AP Y  + A +S++  K +  +     ++   ++++++ I+  TR I++  P+NPTG ++++E L  I  +  ++++++F+DE+YDK+ +
Sbjct:   38 LNIGNPAPFGFDAPDEILVDVIRNLPTAQG-YCDSKGLYSARKAIMQHYQARGMRDVTVE-DIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILY 215          
The following BLAST results are available for this feature:
BLAST of DY256817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
AAT_MYCBO3.520e-1526.67Probable aspartate aminotransferase OS=Mycobacteri... [more]
Y286_HAEIN4.597e-1525.00Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]
DAPT2_ANAVT4.597e-1525.47LL-diaminopimelate aminotransferase 2 OS=Anabaena ... [more]
ATTY_RAT7.841e-1529.71Tyrosine aminotransferase OS=Rattus norvegicus GN=... [more]
ATTY_MOUSE7.841e-1529.71Tyrosine aminotransferase OS=Mus musculus GN=Tat P... [more]
DAPAT_NATTJ1.024e-1425.59LL-diaminopimelate aminotransferase OS=Natranaerob... [more]
DAPAT_DESDG1.024e-1428.89LL-diaminopimelate aminotransferase OS=Desulfovibr... [more]
ATTY_BOVIN1.024e-1429.71Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=... [more]
YFBQ_SHIFL1.338e-1425.00Uncharacterized aminotransferase yfbQ OS=Shigella ... [more]
YFBQ_ECOLI1.338e-1425.00Uncharacterized aminotransferase yfbQ OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2BE04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256817 ID=DY256817; Name=DY256817; organism=Citrus clementina; type=EST; length=729bp
GGAGAAGAAGAGGAATCAGTACCGCTTGCCCTAGGTACCCTTCTCTCATG
GCGAGCTTGTCCACCGTTTCCACCAATCAAAGCGACACCATCCAGAAGAC
CAATCTTCAGCCTCAACAGGTTGCTAAGTGCTTGGAGAAGTTTAAAACTA
CAATCTTTACACAAATGAGTATGCTTGCCATCAAACATGGAGCTATAAAT
CTTGGTCAAGGCTTTCCCAACTTTGATGGCCCAGATTTTGTTAAAGATGC
AGCGATTCAAGCCATAAGGGATGGGAAGAATCAATATGCTCGTGGACATG
GGGTTCCAGAGTTCAACTCTGCCATTGCTTCCCGGTTTAAGAAAGATTCT
GGGCTCGAGGTTGACCCTGAAAAGGAAGTTACTGTTACCTCTGGGTGCAC
CCAAGCCATTGCTGCAACCATCTTAGGTTTGATTAATCCTGGAGATGAGG
TGATCCTTTTTGCACCTTTCTATGATTCCTATGAAGCTACTCTCTCCATG
GCTGGTGCTAAAATTAAATGCATCACATTGCGCCCTCCAGAATTTGCCAT
CCCCATTGAAGAGCTCAAGTCTACAATCTCAAAAAATACTCGTGCAATTC
TTATGAACACTCCACATAACCCCACTGGAAAGATGTTCACTAGGGAGGAA
CTTAATGTTATTGCATCTCTTTGCATTGAGAATGATGTGTTGGTTTTTAG
TGATGAGGTCTATGATAAGTTGGCTTTTG
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