DY256946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: ASPA_HELPJ (Aspartate ammonia-lyase OS=Helicobacter pylori J99 GN=aspA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.293e-17 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + G +LNVF+P+IA L HS +LG A + CV GI AN + + S+ +VT+LNP IGY+ +A +AK+A K ++ D AL+ +L E+ D++ PE M+ P Sbjct: 347 LAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEKICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC1_PSEAE (Fumarate hydratase class II 1 OS=Pseudomonas aeruginosa GN=fumC1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.336e-17 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 335 V G +G+FELNV P++A LLHS++LL + S + + N+ ++S+ L + +LVT+LNP IGY AA +AK+A++EG + D AL+ L+ + L+ PEK+ Sbjct: 343 VAGQSGNFELNVMLPLVADNLLHSIQLLANVSRLLADKAIASFKVNQGKLSEALARNPILVTALNPIIGYQKAAEIAKQAYREGRPIIDVALENTDLDRARLEVLLDPEKL 453
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_MYCTU (Fumarate hydratase class II OS=Mycobacterium tuberculosis GN=fumC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.251e-16 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 6 GGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVL 293 GG+NG FELNV+ PM+A +L S +LL + S F + C+ G+ AN E + +L S +VT LN IGY+ AAAVAK+A KE T++ + G++ Sbjct: 350 GGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLI 445
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_MYCBO (Fumarate hydratase class II OS=Mycobacterium bovis GN=fumC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.251e-16 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 6 GGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVL 293 GG+NG FELNV+ PM+A +L S +LL + S F + C+ G+ AN E + +L S +VT LN IGY+ AAAVAK+A KE T++ + G++ Sbjct: 350 GGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLI 445
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: ASPA_BACSU (Aspartate ammonia-lyase OS=Bacillus subtilis GN=ansB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 39/109 (35.78%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 18 GHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 G ELNV +P++ LL S+ ++ + SF NC++GI+AN +R+ + + +S ++T++NP +GY+ AA +A++A G +++D L+ VL EE D ++ P +M P Sbjct: 357 GQLELNVMEPVLVFNLLQSISIMNNGFRSFTDNCLKGIEANEKRMKQYVEKSAGVITAVNPHLGYEAAARIAREAIMTGQSVRDLCLQHDVLTEEELDIILNPYEMTKP 465
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_HALSA (Fumarate hydratase class II OS=Halobacterium salinarium GN=fumC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15 Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 6 GGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKM 335 G + G +LN++KP++A L S +L +ASA+F + V ++AN + S+ L T+LNP IGYD A+ VAK A KEG T+ + ++ G L+ E +++ PE M Sbjct: 350 GAAEGQIDLNLYKPVLAHNFLQSADMLANASAAFGEKFVAKLEANEAACEAQVERSMALATALNPTIGYDKASEVAKAALKEGKTVTEVVVEKGYLSEAEAADVLDPEGM 459
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: ASPA_PSEFL (Aspartate ammonia-lyase OS=Pseudomonas fluorescens GN=aspA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + G +LNV +P+IA + S+RLL A ++C+ GI AN R +L+ S+ LVT+LNP IGY+NA +A+ A + G + + + G+L+ D+++ PE MI P Sbjct: 358 MAAEGGQLQLNVMEPLIAFKIFDSIRLLQRAMDMLREHCIVGITANEARCRELVEHSIGLVTALNPYIGYENATRIARIALESGRGVLELVREEGLLDDAMLDDILRPENMIAP 471
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: ASPA_PSEAE (Aspartate ammonia-lyase OS=Pseudomonas aeruginosa GN=aspA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15 Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + G +LNV +P+IA + S+RLL A ++C+ GI AN ER +L+ S+ LVT+LNP IGY+N+ +AK A + G + + + +L+ ++++PE MI P Sbjct: 354 LAAEGGQLQLNVMEPLIAYKIFDSIRLLQRAMDMLREHCITGITANVERCHELVEHSIGLVTALNPYIGYENSTRIAKTALESGRGVLELVREEKLLDEATLADILLPENMIAP 467
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_CORGL (Fumarate hydratase class II OS=Corynebacterium glutamicum GN=fumC PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.998e-14 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEE 305 G+ G FELNVF P++A +L S RLL + S F V GI+ N + +L S +VT LN IGY+ AA VAK A EG T++ + LG+++ E+ Sbjct: 351 GTQGQFELNVFIPVMARNVLESARLLANTSRVFATRLVDGIEPNEAHMKELAESSPSIVTPLNSAIGYEAAAKVAKTALAEGKTIRQTVIDLGLVDGEK 449
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_COREF (Fumarate hydratase class II OS=Corynebacterium efficiens GN=fumC PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14 Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEE 305 GS G FELNVF P++A +L S RLL + + F V GI N E + +L S +VT LN IGY+ AA VAK A EG T++ + +G ++ E+ Sbjct: 351 GSQGQFELNVFIPVMARNVLESARLLANTARVFATRLVDGIVPNEEHMKQLAESSPSIVTPLNSAIGYEAAAKVAKAALAEGKTIRQTVIDMGFVDGEK 449 The following BLAST results are available for this feature:
BLAST of DY256946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256946 ID=DY256946; Name=DY256946; organism=Citrus clementina; type=EST; length=788bpback to top |