DY257064

Overview
NameDY257064
Unique NameDY257064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257064 vs. ExPASy Swiss-Prot
Match: SFR2_ARATH (Beta-glucosidase-like SFR2, chloroplastic OS=Arabidopsis thaliana GN=SFR2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 52/174 (29.89%), Postives = 75/174 (43.10%), Query Frame = 3
Query:  264 VDFLGLNYYTADYAEEVTSFSNTNLSYTTDSRVNRTKEKNGFPLGQPTGSDWLSIYPKGIRELLLYLKEKYN--PPPIYITENGVGDVNSSSWRISYALNDTVRVNYYNDHLSCILEAIKGGVDVRGYFAWSFLDNYEWEDGYTTRFGITYVDYKDGLRRSLKNSALWFKKFLR 779
            +DF+G+NYY     +E    +   L  T +                        +YP G+  +LL   E+Y     P  +TENGV D             D +R  Y  +HL  +  A+  GV V GY  W+  DN+EW DGY  +FG+  VD    L R+L+ S   F K ++
Sbjct:  369 LDFIGINYY----GQEAVCGAGLKLVETDEY-----------------SESGRGVYPDGLYRVLLMFHERYKHLKVPFIVTENGVSDET-----------DVIRRPYLIEHLLALYAAMLKGVPVLGYIFWTISDNWEWADGYGPKFGLVAVDRSHDLARTLRQSYHLFSKIVK 510          
BLAST of DY257064 vs. ExPASy Swiss-Prot
Match: CASB_KLEOX (Phospho-cellobiase OS=Klebsiella oxytoca GN=casB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.169e-13
Identity = 58/191 (30.37%), Postives = 88/191 (46.07%), Query Frame = 3
Query:  231 TKSQAEMVKGSVDFLGLNYYTADYAEEVTSFSNTNLSYTTDSRVNRTKEKNGF---PLGQPTGSDW-LSIYPKGIRELLLYLKEKYNPPPIYITENGVGDVNSSSWRISYALNDTVRVNYYNDHLSCILEAIKGGVDVRGYFAWSFLDNYEWEDG-YTTRFGITYVDYKDG----LRRSLKNSALWFKKFL 776
            T +    +K +VDF+  +YY                  T D  +N+    N     P      S+W   I P G+R LL  L ++Y  P ++I ENG+G  +        ++ND  R++Y NDHL  + EAI+ GV++ GY +W  +D         + R+G  YVD  D     L RS K S  W+K+ +
Sbjct:  281 TDADRAALKETVDFISFSYYMTGCV-------------TADEELNKKARGNILSMVPNPHLASSEWGWQIDPLGLRTLLNVLWDRYQKP-LFIVENGLGAKDKVE--ADGSINDDYRISYLNDHLVQVREAIEDGVELMGYTSWGPIDLVSASKAEMSKRYGFIYVDRDDDGNGTLARSRKKSFWWYKEVI 455          
BLAST of DY257064 vs. ExPASy Swiss-Prot
Match: ASCB_ECOLI (6-phospho-beta-glucosidase ascB OS=Escherichia coli (strain K12) GN=ascB PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  177 GSYPRSMQHLVGNRLPKFTKSQA--EMVKGSVDFLGLNYYTADYAEEVTSFSNTNLSYTTDSRVNRTKEKNGFPLGQPTGSDWLSIYPKGIRELLLYLKEKYNPPPIYITENGVGDVNSSSWRISYALNDTVRVNYYNDHLSCILEAIKGGVDVRGYFAWSFLDNYEWEDG-YTTRFGITYVDYKDG----LRRSLKNSALWFKKFL 776
            G+YP     +   +     K+    E++K +VDF+  +YY +  A    + +N++ +    S  N        P  Q +   W  I P G+R  +  + ++Y  P +++ ENG+G      +  +  +ND  R++Y  +H+  + EAI  G+ + GY  W  +D      G  + R+G  +VD  D     L R+ K S  W+KK +
Sbjct:  272 GTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRN--------PYLQVSDWGW-GIDPLGLRITMNMMYDRYQKP-LFLVENGLGA--KDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVI 466          
BLAST of DY257064 vs. ExPASy Swiss-Prot
Match: SFR2_ORYSJ (Beta-glucosidase-like SFR2, chloroplastic OS=Oryza sativa subsp. japonica GN=SFR2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12
Identity = 54/175 (30.86%), Postives = 73/175 (41.71%), Query Frame = 3
Query:  264 VDFLGLNYYTADYAEEVTSFSNTNL----SYTTDSRVNRTKEKNGFPLGQPTGSDWLSIYPKGIRELLLYLKEKYNPP--PIYITENGVGDVNSSSWRISYALNDTVRVNYYNDHLSCILEAIKGGVDVRGYFAWSFLDNYEWEDGYTTRFGITYVDYKDGLRRSLKNSALWFKK 770
            +DF+G+NYY     +EV S     L     Y+   R                      +YP G+  +L+   E+Y     P  ITENGV D             D +R  Y  +HL     AI  GV V GY  W+  DN+EW DGY  +FG+  VD  + L R  + S   F +
Sbjct:  406 LDFIGINYY----GQEVISGPGLKLVDNDEYSESGR---------------------GVYPDGLFRILIQFNERYKRLNIPFVITENGVSDET-----------DLIRKPYILEHLLATYAAIIMGVRVLGYLFWTTSDNWEWADGYGPKFGLVAVDRANNLARKPRPSYFLFSR 544          
BLAST of DY257064 vs. ExPASy Swiss-Prot
Match: ARBB_ERWCH (6-phospho-beta-glucosidase OS=Erwinia chrysanthemi GN=arbB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 63/239 (26.36%), Postives = 102/239 (42.68%), Query Frame = 3
Query:   96 FPTVASEKAAYRAIDFKFGWIF--NPITYGSYPRSMQHLVGNR--LPKFTKSQAEMVKGSVDFLGLNYYTADYAEEVTSFSNTNLSYTTDSRVNRTKEK--NGFPLGQPTGSDW-LSIYPKGIRELLLYLKEKYNPPPIYITENGVGDVNSSSWRISYALNDTVRVNYYNDHLSCILEAIKGGVDVRGYFAWSFLDNYEWEDG-YTTRFGITYVDYKD----GLRRSLKNSALWFKKFL 776
            +P  +  +    ++     W+F  +    G+YP  M      +      T    + +K +VDF+  +YY             T    T ++++ +T+    N  P      S+W   I P G+R LL +L ++Y  P ++I ENG+G  +         + D  R+ Y NDHL  + EAI  GV+V GY  W  +D         + R+G  YVD  D     L R  K S  W++  +
Sbjct:  233 YPLTSKPEDVMESLHQNREWLFFGDVQVRGAYPGYMHRYFREQGITLNITAQDKQDLKATVDFISFSYYM------------TGCVTTDEAQLEKTRGNILNMVPNPYLESSEWGWQIDPLGLRYLLNFLYDRYQKP-LFIVENGLGAKDKIEENGD--IYDDYRIRYLNDHLVQVGEAIDDGVEVLGYTCWGPIDLVSASKAEMSKRYGFIYVDRDDAGHGSLERRRKKSFYWYQSVI 456          
The following BLAST results are available for this feature:
BLAST of DY257064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
SFR2_ARATH2.355e-1429.89Beta-glucosidase-like SFR2, chloroplastic OS=Arabi... [more]
CASB_KLEOX1.169e-1330.37Phospho-cellobiase OS=Klebsiella oxytoca GN=casB P... [more]
ASCB_ECOLI5.800e-1326.096-phospho-beta-glucosidase ascB OS=Escherichia col... [more]
SFR2_ORYSJ1.292e-1230.86Beta-glucosidase-like SFR2, chloroplastic OS=Oryza... [more]
ARBB_ERWCH2.204e-1226.366-phospho-beta-glucosidase OS=Erwinia chrysanthemi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3DD04ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257064 ID=DY257064; Name=DY257064; organism=Citrus clementina; type=EST; length=873bp
CGGGAACCGCTGTAAAATTGTACAGACAAAATTATCAGGCATCTCAAAAC
GGCTTAATCGGGATTACAGTCAGCTCTATCTGGGCTGTGCCTAAATTTCC
AACAGTTGCTTCCGAGAAAGCTGCCTATAGAGCTATTGATTTTAAATTCG
GATGGATTTTTAATCCTATCACATACGGAAGCTACCCAAGGAGCATGCAG
CATTTGGTGGGCAATCGACTTCCCAAATTCACAAAATCACAAGCAGAAAT
GGTAAAAGGATCAGTTGATTTCCTTGGATTAAATTACTATACTGCAGATT
ATGCAGAGGAAGTAACATCTTTTAGCAACACCAACTTAAGTTATACAACA
GACAGTCGTGTTAATCGAACTAAGGAGAAAAATGGATTTCCCCTTGGTCA
GCCGACGGGTTCGGACTGGCTTTCCATTTACCCGAAGGGAATTCGAGAAC
TTTTGCTATATCTAAAGGAAAAATACAATCCTCCTCCCATTTACATAACT
GAAAATGGAGTGGGTGATGTGAACAGTAGCTCATGGCGTATTAGTTATGC
TCTGAACGATACAGTGCGGGTAAATTACTATAACGACCATCTATCATGTA
TCCTTGAAGCTATCAAGGGAGGCGTTGACGTGAGAGGATATTTTGCATGG
TCATTTCTCGACAACTACGAGTGGGAAGATGGTTATACAACTCGATTTGG
GATAACTTATGTAGACTACAAAGATGGATTGAGAAGATCCCTTAAAAACT
CTGCTTTATGGTTCAAAAAATTCCTCCGAAAACAAACGGATATTTGCTCT
AACACCTCTTCTTTTGAATTGTACTCTGACCAGTGATTTATACAATTACT
AATAAGTGAGTGCGTTCTTAAAG
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