DY257739

Overview
NameDY257739
Unique NameDY257739
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1096
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: POTA_BACCZ (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ZK / E33L) GN=potA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNN 330
            SGG ++R+++A A++ +P++++LDEP   +D   R+ +   +++ ++  G   I  TH  EEA  +SDRI +M KG +  IGT   + +K  T F+ T  F G NN
Sbjct:  136 SGGQQQRVAIARAIVNNPRVLLLDEPLGALDFKLRKDLQRELKNLQRNLGITFIYVTHDQEEAMSMSDRIVVMNKGHIEQIGTPKEIYNKPKTLFVAT--FIGENN 239          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: POTA_BACCR (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=potA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNN 330
            SGG ++R+++A A++ +P++++LDEP   +D   R+ +   +++ ++  G   I  TH  EEA  +SDRI +M KG +  IGT   + +K  T F+ T  F G NN
Sbjct:  136 SGGQQQRVAIARAIVNNPRVLLLDEPLGALDFKLRKDLQRELKNLQRNLGITFIYVTHDQEEAMSMSDRIVVMNKGHIEQIGTPKEIYNKPKTLFVAT--FIGENN 239          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: POTA_BACC1 (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus cereus (strain ATCC 10987) GN=potA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNN 330
            SGG ++R+++A A++ +P++++LDEP   +D   R+ +   +++ ++  G   I  TH  EEA  +SDRI +M KG +  IGT   + +K  T F+ T  F G NN
Sbjct:  136 SGGQQQRVAIARAIVNNPRVLLLDEPLGALDFKLRKDLQRELKNLQRNLGITFIYVTHDQEEAMSMSDRIVVMNKGHIEQIGTPKEIYNKPKTLFVAT--FIGENN 239          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: POTA_BACAN (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus anthracis GN=potA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNN 330
            SGG ++R+++A A++ +P++++LDEP   +D   R+ +   +++ ++  G   I  TH  EEA  +SDRI +M KG +  IGT   + +K  T F+ T  F G NN
Sbjct:  136 SGGQQQRVAIARAIVNNPRVLLLDEPLGALDFKLRKDLQRELKNLQRNLGITFIYVTHDQEEAMSMSDRIVVMNKGHIEQIGTPKEIYNKPKTLFVAT--FIGENN 239          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: POTA_BACAH (Spermidine/putrescine import ATP-binding protein potA OS=Bacillus thuringiensis (strain Al Hakam) GN=potA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNN 330
            SGG ++R+++A A++ +P++++LDEP   +D   R+ +   +++ ++  G   I  TH  EEA  +SDRI +M KG +  IGT   + +K  T F+ T  F G NN
Sbjct:  136 SGGQQQRVAIARAIVNNPRVLLLDEPLGALDFKLRKDLQRELKNLQRNLGITFIYVTHDQEEAMSMSDRIVVMNKGHIEQIGTPKEIYNKPKTLFVAT--FIGENN 239          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: CYSA_VIBCH (Sulfate/thiosulfate import ATP-binding protein cysA OS=Vibrio cholerae GN=cysA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 49/159 (30.82%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHV--WDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRL----KSKFGTGFIVTVN-FTGSNNGQSPLNGDHEVASPHHDAVKQ----FFETH-LDVLPKEENKAFLTYVI 459
            SGG K+R+++A AL   P++++LDEP   +D   R+ +  W      + G   +  TH  +EA  LSDR+ +M+ GR+  I + + L     S+F   F   VN F G       +NG   +  P  DA +Q    +  +H L +  KE ++A L + +
Sbjct:  138 SGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWLRSLHDELGFTSVFVTHDQDEALELSDRVVVMSNGRIEQIDSPVELYAQPNSRFVFDFFGNVNQFAGEWQNGQWVNGSAFIQPPESDATRQSGLLYVRSHELALSDKENSQASLPFEV 296          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: CBIO2_MYCPN (Cobalt import ATP-binding protein cbiO 2 OS=Mycoplasma pneumoniae GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.979e-11
Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAK-KGRAIILTTHSMEEADILSDRIAIMAKGRL 246
            SGG KRR+++A  L  +P+++I DEPT G+DP   R +  +I+DAK  GR + + TH ME    ++D + +++KG+L
Sbjct:  162 SGGQKRRVAIAGILAIEPEVLIFDEPTAGLDPEGEREMMRLIKDAKASGRTVFMITHQMENVLEVADEVLVLSKGQL 238          
The following BLAST results are available for this feature:
BLAST of DY257739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
POTA_BACCZ9.979e-1135.85Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACCR9.979e-1135.85Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACC19.979e-1135.85Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACAN9.979e-1135.85Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACAH9.979e-1135.85Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_VIBCH9.979e-1130.82Sulfate/thiosulfate import ATP-binding protein cys... [more]
CBIO2_MYCPN9.979e-1141.56Cobalt import ATP-binding protein cbiO 2 OS=Mycopl... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1AG09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257739 ID=DY257739; Name=DY257739; organism=Citrus clementina; type=EST; length=1096bp
GTGAGAGCTGGGAGCTACAGTGGAGGAATGAAGCGTCGCCTTAGTGTTGC
CATAGCTCTTATTGGTGATCCAAAGTTGGTCATTCTGGATGAACCGACTA
CTGGAATGGATCCCATTACGAGGAGGCATGTTTGGGATATAATACAAGAT
GCAAAGAAAGGTCGTGCCATTATCCTGACGACACACTCAATGGAAGAAGC
TGACATTCTTAGTGACCGCATAGCTATAATGGCAAAGGGCAGACTCCGCT
GTATTGGAACCTCAATCAGATTAAAGTCAAAGTTTGGTACTGGTTTCATT
GTTACTGTTAATTTCACCGGAAGCAATAATGGACAAAGTCCTCTTAATGG
AGATCATGAAGTTGCAAGTCCTCATCATGATGCAGTGAAGCAGTTCTTTG
AAACTCATTTAGATGTGTTACCAAAAGAGGAGAATAAAGCATTCCTGACA
TATGTCATTCCCCATGATAGAGAGGCGATTTTGAAAAAATTTTTTGTGGA
GCTCCAAGATAGAGAAAAAGAATTGGGTATAGCAGATATTCAAGTAAGTC
TCACAACACTAGAAGATGTTTTCTTGAATATAGCAAAACAGGCAGAGCTA
GAAACTGCTGCTGCTGAAGGAAGGTTGGTCACTCTAAACTTGACATCCGG
GGCATCAGTTGAGATACCTCCAGGAGCAAGGTTTGTGGGGATTCCTGGAA
TGGAATCTGCAGAGAATCCTAGAGGCATTATGGTTGAAGTATACTGGGAG
CAAGATGATACTGGTGCTCTCTGCATTTCCGGCCACTCTCCTGAAAAACC
AATACCCCCTCATGTCGAACTAGATGCTTCTTCAGCTTCGACTTCCCGTG
GAAATTTGTTCGGCCAGACAGGACCAGTTCATGGAAATGTCATCGATCCC
AATCAAATTGGTGACTAACACCCTTTAATAGCTTTTCACGTATTACAATA
TTTTACTGGAATACCAAGTTGTTTTAAGGATTTTGGTAATTTAAAGGATG
TTTTTGTATATCAATGTGAAAATTTTAATTTCTTTTTTCCGTAATGCCAC
CAAAAAAAACAGGGAAAAATTCCCTTTCACATTTTTTTCTTTTAAT
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