DY257739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: AB5A_ARATH (ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5 PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.026e-31 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE 597 AG YSGGMKRRLSVAI+LIG PK+V +DEP+TG+DP +RR +W I+ AK AIILTTHSMEEA+ L DR+ I GRL+C+G LK+++G +++T+ T + + + + SP+ + T +PKEE + + + F ++ + + ++ TTLEDVF+ +A+ A+ Sbjct: 750 AGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKRAKNHTAIILTTHSMEEAEFLCDRLGIFVDGRLQCVGNPKELKARYGGSYVLTM--TTPSEHEKDVEMLVQDVSPNAKKIYHIAGTQKFEIPKEEVR--------------ISEVFQAVEKAKDNFRVFAWGLADTTLEDVFIKVARTAQ 930
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA7_MOUSE (ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.749e-31 Identity = 79/206 (38.35%), Postives = 118/206 (57.28%), Query Frame = 1 Query: 7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWD-IIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK-QAELETAAAE 618 AG+YSGG KR+L+ A+AL+GDP +V LDEPTTGMDP RR +W+ ++ ++GR+++LT+HSMEE + L R+AIM GR RC+G+S LK +FG G +T+ P + P + +E + + L + +P L + F EL + + G+ D VS TTLE+VFL +K Q E E ++ + Sbjct: 1937 AGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREGRSVVLTSHSMEECEALCTRLAIMVNGRFRCLGSSQHLKGRFGAGHTLTLRVPPDQ--PEPAIAFIRITFPGAEL-------------REVHGSRLRFQLPPGGRCTLTRVFRELAAQGRAHGVEDFSVSQTTLEEVFLYFSKDQGEEEESSRQ 2127 HSP 2 Score: 109.768 bits (273), Expect = 2.991e-23 Identity = 69/234 (29.49%), Postives = 118/234 (50.43%), Query Frame = 1 Query: 19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVT--------VNFTGSNNGQSPL-------NG--------------DHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAIL----------KKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603 SGGM+R+LSVAIA +G ++VI+DEPT G+DP +RR +W+++ ++GR +IL+TH ++EA++L DR+A++A G L C G+ + L+ G G+ +T V + + P NG ++ +P + L+++ + A L +PH+ +L F EL + + LG+ +S T LE++FL + + A E Sbjct: 938 SGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYREGRTLILSTHHLDEAELLGDRVAMVAGGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDAKGDSEDPRREKKSDGNGRTSDTAFTRGTSDKSNQAPAPGAVPITPSTARILELVQQHVPGAQLVEDLPHELLLVLPYAGALDGSFAMVFQELDQQLELLGLTGYGISDTNLEEIFLKVVEDAHRE 1171
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: AB7A_ARATH (ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.749e-31 Identity = 76/197 (38.58%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE 597 AG YSGGMKRRLSVAI+LIG+PK+V +DEP+TG+DP +R+++W +I+ AK+ AIILTTHSMEEA+ L DR+ I G L+CIG LK ++G ++ T+ T S+ + + + SP+ + T LPKEE + + + F ++ + + ++ TTLEDVF+ + + + Sbjct: 749 AGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKRAKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKELKGRYGGSYVFTM--TTSSEHEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEVR--------------ISEVFQAVEKAKSNFTVFAWGLADTTLEDVFIKVVRNGQ 929
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA7_DICDI (ABC transporter A family member 7 OS=Dictyostelium discoideum GN=abcA7 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.285e-31 Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 1 Query: 19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIA 585 SGGMKRRLS AIA+ G+ ++ LDEPTTG+ TR+ +W I + KK R+IILTTHSM+EADILSDRIAI+++G+L+CIGT LK KFG G+ V ++ + D++ D +K F + L + N +++ Y +P D +I+ + L +++ + + +S T+LEDVFL I+ Sbjct: 659 SGGMKRRLSFAIAMTGESSIIFLDEPTTGLSIETRKDLWGTINELKKNRSIILTTHSMQEADILSDRIAIVSQGKLQCIGTQTHLKQKFGDGYSVRID----------IQEDYQNTHNPTDLIKSFSPS--ATLSETFNGSYV-YRLPKD--SIISDLYEYLVLNKEQYHLQEWSLSQTSLEDVFLKIS 832
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: AB10A_ARATH (ABC transporter A family member 10 OS=Arabidopsis thaliana GN=ABCA10 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 2.285e-31 Identity = 84/198 (42.42%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENK-AFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE 597 AG YSGGMKRRLSVAI+LIG+PK+V +DEP+TG+DP +R+ +W +IQ AK+ AIILTTHSMEEA+ L DR+ I G L+C+G LK ++G ++ T+ T S + + + SP+ V T +PK+E A + +++ E + KF V G+AD TTLEDVF +A A+ Sbjct: 723 AGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQRAKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFTM--TTSVEHEEKVERMVKHISPNSKRVYHLAGTQKFEIPKQEVMIADVFFMV----EKVKSKFTV------FAWGLAD-----TTLEDVFFKVATTAQ 903
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: AB8A_ARATH (ABC transporter A family member 8 OS=Arabidopsis thaliana GN=ABCA8 PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.984e-31 Identity = 79/195 (40.51%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAK 588 + YSGGMKRRLSVAI+LIG PK+V +DEP+TG+DP +R+ +WD+++ AK+ AIILTTHSMEEA+IL DRI I G L+CIG LKS++G +++TV T S + + S + + + T LPK+E K + + F L+ + + ++ TTLEDVF+ +A+ Sbjct: 721 QVSKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRKSLWDVVKRAKRKGAIILTTHSMEEAEILCDRIGIFVDGSLQCIGNPKELKSRYGGSYVLTV--TTSEEHEKEVEQLVHNISTNAKKIYRTAGTQKFELPKQEVK--------------IGEVFKALEKAKTMFPVVAWGLADTTLEDVFIKVAQ 899
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA5_MOUSE (ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 2.526e-30 Identity = 76/203 (37.44%), Postives = 119/203 (58.62%), Query Frame = 1 Query: 4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLP-KEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETA 609 +A SGG KR+LSV IA++G+PK+++LDEPT GMDP +R VW++++ K R + +TH M+EADIL+DR A++++G L+C+G+SI LKSK+G G+ +++ D A+ +++ H+ ++N L Y +P F L D LG+ VS+TTLEDVFL + +AE++ A Sbjct: 611 QAKKLSGGQKRKLSVGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYI------------DRYCAT---ESLSSLVRQHIPAAALLQQNDQQLVYSLPFKDMDKFSGLFSAL-DIHSNLGVISYGVSMTTLEDVFLKLEVEAEIDQA 797 HSP 2 Score: 125.176 bits (313), Expect = 6.879e-28 Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1 Query: 25 GMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDA--KKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603 G+KR+L A++++G+P++ +LDEP+TGMDP ++H+W I+ A K RA +LTTH MEEA+ + DR+AIM G+LRCIGT LKSKFG G+ + + E+ +A +Q E + L + IP + L + F +L++ ++ I + S TLE VF+ + K+ E E Sbjct: 1436 GIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQ-----------ESFSSILAFKIPKEDVQSLSQSFAKLEEAKRTFAIEEYSFSQATLEQVFVELTKEQEEE 1619
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA6_HUMAN (ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 7.349e-30 Identity = 68/196 (34.69%), Postives = 118/196 (60.20%), Query Frame = 1 Query: 19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603 S G KR+L+ I ++GDP++++LDEPTTG+DP +R VW ++++ + I+ +T SM+EADIL+DR IM+ GRL+C G+S+ LK ++G G+ ++++ +E+ +P + + F H+ D K ENK L Y +P +R F +L D+ + G+ +S++TL +VF+ + Q+ +E Sbjct: 616 SEGQKRKLTFGITILGDPQILLLDEPTTGLDPFSRDQVWSLLRERRADHVILFSTQSMDEADILADRKVIMSNGRLKCAGSSMFLKRRWGLGYHLSLH-------------RNEICNP--EQITSFITHHIPDAKLKTENKEKLVYTLPLERTNTFPDLFSDL-DKCSDQGVTGYDISMSTLNEVFMKLEGQSTIE 795 HSP 2 Score: 108.227 bits (269), Expect = 8.702e-23 Identity = 63/196 (32.14%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAEL 600 + G+ R+L ++L+G+ +++LDEP+TG+DP ++ +W IQ K R ++LTTH++ EA+ L DR+AIM GRLRCIG+ LK+K G +I+ + ++ +V H + +K F + +E + LTY +P L + F +L+ + + + +S TLE VFL ++K+ E+ Sbjct: 1414 TAGITRKLCFVLSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVAIMVSGRLRCIGSIQHLKNKLGKDYILELKVKETS----------QVTLVHTEILKLFPQ----AAGQERYSSLLTYKLPVADVYPLSQTFHKLEAVKHNFNLEEYSLSQCTLEKVFLELSKEQEV 1595
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCAB_DICDI (ABC transporter A family member 11 OS=Dictyostelium discoideum GN=abcA11 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 9.598e-30 Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 1 Query: 4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAE 597 ++ SGG KR+LSVA LIGDP++V+LDEP+T +DPI+R + +I + K ++II+TTHS+ E + +R+AIM G++RCIGT LK K+G+G+ T++ +N LN +E+ H+ + Q F V E F++Y +P + L F LQ ++ L I D S ++LE VFL A E Sbjct: 591 KSSDLSGGTKRKLSVACCLIGDPQVVLLDEPSTSLDPISRNELHSLIDELKVNKSIIMTTHSINEINQCCNRVAIMVDGKIRCIGTPNHLKHKYGSGY--TIDIIPNNY----LNNSYEI----HNFMAQTFPNATRV---ERLGRFISYDLPSQNQQSLSTIFRILQSNKQRLQILDFSASSSSLEKVFLKFANLQE 775
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA5_RAT (ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus GN=Abca5 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 9.598e-30 Identity = 74/203 (36.45%), Postives = 119/203 (58.62%), Query Frame = 1 Query: 4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLP-KEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETA 609 +A SGG KR+LS+ IA++G+PK+++LDEPT GMDP +R VW++++ K R + +TH M+EADIL+DR A++++G L+C+G+SI LKSK+G G+ +++ D A+ +++ H+ ++N + Y +P F L D LG+ VS+TTLEDVFL + +AE++ A Sbjct: 611 QAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYI------------DRYCAT---ESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMDKFSGLFSAL-DIHSNLGVISYGVSMTTLEDVFLKLEVEAEIDQA 797 HSP 2 Score: 125.561 bits (314), Expect = 5.267e-28 Identity = 71/195 (36.41%), Postives = 108/195 (55.38%), Query Frame = 1 Query: 25 GMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDA--KKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603 G+KR+L A++++G+P++ +LDEP+TGMDP ++H+W I+ A K RA +LTTH MEEA+ + DR+AIM G+LRCIGT LKSKFG G+ + + E+ +A +Q E + L Y IP + L + F +L++ + I + S TLE VF+ + K+ E E Sbjct: 1436 GIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQ-----------ESFSSILAYKIPKEDVQSLSQSFAKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEE 1619 The following BLAST results are available for this feature:
BLAST of DY257739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257739 ID=DY257739; Name=DY257739; organism=Citrus clementina; type=EST; length=1096bpback to top |