DY257739

Overview
NameDY257739
Unique NameDY257739
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1096
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY257739_ssr605 microsatellite DY257739_ssr605:605..616. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9913 contig Ccv1_Contig9913:4..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA9_HUMAN (ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.984e-28
Identity = 64/202 (31.68%), Postives = 122/202 (60.40%), Query Frame = 1
Query:    1 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603
            + A + SGG  R+L+  IA++GDP++++LDEPT G+DP++R  +W+++++ K  R I+ +T  ++EADIL+DR   ++ G+L+C G+S+ LK K+G G+ ++++              +E   P  +++    + H+ D     +++  L Y++P +R     + + +L DR    GI D  VS+TTL +VFL +  ++ ++
Sbjct:  613 ILAQNLSGGQNRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKEGKSDRVILFSTQFIDEADILADRKVFISNGKLKCAGSSLFLKKKWGIGYHLSLHL-------------NERCDP--ESITSLVKQHISDAKLTAQSEEKLVYILPLERTNKFPELYRDL-DRCSNQGIEDYGVSITTLNEVFLKLEGKSTID 798          

HSP 2 Score: 115.161 bits (287), Expect = 7.118e-25
Identity = 66/196 (33.67%), Postives = 110/196 (56.12%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAEL 600
            S G+KR+L   ++++G+P +V+LDEP+TGMDP  ++ +W +I+   +   R  +LTTH M EA+ + DR+AIM  GRLRCIG+   LKSKFG  +++ +     N  Q           P H  + + F        +E   + + Y +P +    L + F +L+  ++   + +  +S +TLE VFL ++K+ EL
Sbjct: 1422 SEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQVIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKL--KNLAQ---------MEPLHAEILRLFP---QAAQQERFSSLMVYKLPVEDVRPLSQAFFKLEIVKQSFDLEEYSLSQSTLEQVFLELSKEQEL 1603          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCAD_MOUSE (ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 7.605e-27
Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 1
Query:    7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDRE-KELGIADIQVSLTTLEDVFL 576
            AG  SGGMKR+LS+ IA +G  K V+LDEP++G+DP +RR +WDI+   ++GR II TTH ++EA++LSD +A++ +GRLRC      LK  +G G  +T++   S            V S     + Q F        K+     LTY IP D +    K   +  D+  + L +    +S TTLE+VFL
Sbjct: 3941 AGVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDILLKYREGRTIIFTTHHLDEAEMLSDHVAVLQQGRLRCYAPPADLKETYGQGLTLTLSKQPSILETQEPKDVARVTSLIQIYIPQAF-------LKDSCGGELTYTIPKDADRTCFKGLCQALDQNLQHLHLTGYGISDTTLEEVFL 4124          

HSP 2 Score: 119.783 bits (299), Expect = 2.890e-26
Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 1
Query:   13 SYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWD-IIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELET 606
            +YSGG +R+LS A+AL+G P +++LDEP++GMDP ++R++W  I Q+ + G A +LT+HSMEE + L  R+AIM  G  RC+G    +K++FG G+  TV       G  P        S   D +K  F     +  K +    L Y +    E +   F V L++ +  L I    +S TTLE VF+N A + +L+T
Sbjct: 4831 TYSGGTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVLTSHSMEECEALCTRLAIMVDGSFRCLGPPQHIKNRFGDGY--TVKVWLHKEGSQP--------SAVSDCLKLHFP---GIQFKGQRLNLLEYHVQKSWECLADLFKV-LENNKSLLNIEHYSISQTTLEQVFVNFATE-QLQT 5014          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA6_MOUSE (ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 9.933e-27
Identity = 63/189 (33.33%), Postives = 110/189 (58.20%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLP-KEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNI 582
            S G KR+L+  IA +GDP++++LDEPT G+DP +R+ +W  +++ +    I+ +T  M+EADIL+DR  ++A G L+C G+S+ LK K+G G+ +++    + +                + +  F   H+     K + K  L Y++P +R +   +FF +L D+    G+   +VS++TL DVFLN+
Sbjct:  616 SEGQKRKLTFGIATVGDPQILLLDEPTVGLDPFSRQRIWGFLKERRADHVILFSTQFMDEADILADRKVLIANGALKCTGSSVFLKRKWGLGYHLSLFMDETCDS---------------ERLTSFINHHIPYAKLKAKTKEKLVYILPLERTSEFPEFFSDL-DKYSGQGLMSYEVSMSTLNDVFLNL 788          

HSP 2 Score: 98.5969 bits (244), Expect = 6.895e-20
Identity = 65/208 (31.25%), Postives = 106/208 (50.96%), Query Frame = 1
Query:    1 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAE 618
            V+  +   G  R+L   ++++G+  ++ILDEP+TG+D   +  VW  IQ   K   + ++L+TH + EA+ L DR AIM  GRLRCIG    LK KFG  +++ +     +  Q PL         H + +K F +       ++   + LTY +P      L + F +L+  +    + D  +S  TL+ V L ++K+ EL T   E
Sbjct: 1415 VQVQNLVAGATRKLCFVLSILGNSPVLILDEPSTGLDVSGKHQVWQAIQAVVKDNEKGVLLSTHDLAEAEALCDRAAIMVSGRLRCIGPIQHLKRKFGQDYVLELRV--KDVSQEPL--------VHREILKLFPQ----AARQDRCFSLLTYKLPVTDVHPLSQAFHKLEAVKHGFDLEDYSLSQCTLDRVILELSKEQELGTVYEE 1608          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCAA_HUMAN (ATP-binding cassette sub-family A member 10 OS=Homo sapiens GN=ABCA10 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 2.213e-26
Identity = 64/200 (32.00%), Postives = 116/200 (58.00%), Query Frame = 1
Query:    7 AGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHL-DVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603
            A   SGG KR+L++ IA++GDP++++LDEPT G+DP +R  VW ++++ K  R I+ +T  M+EADIL+DR   ++ G+L+C G+S+ LK K+G G+ +++               H       + +    + H+ D     E++  L Y +P ++       + +L D+  + GI +  VS+T+L +VFLN+  ++ ++
Sbjct:  525 AKKLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPFSRHRVWSLLKEHKVDRLILFSTQFMDEADILADRKVFLSNGKLKCAGSSLFLKRKWGIGYHLSL---------------HRNEMCDTEKITSLIKQHIPDAKLTTESEEKLVYSLPLEKTNKFPDLYSDL-DKCSDQGIRNYAVSVTSLNEVFLNLEGKSAID 708          

HSP 2 Score: 113.62 bits (283), Expect = 2.071e-24
Identity = 64/196 (32.65%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAEL 600
            S G+KR+L   ++++G+P +V+LDEP TGMDP  ++ +W I+Q   K   R  +LTTH M EA+ + DR+A+M  G LRCIG+   LK+KFG  +++ +           +    +V + H + +K F +       +E   + + Y +P +    L + F +L+  ++   + +  +S  TLE VFL + K+ EL
Sbjct: 1341 SEGIKRKLCFVLSILGNPSVVLLDEPFTGMDPEGQQQMWQILQATVKNKERGTLLTTHYMSEAEAVCDRMAMMVSGTLRCIGSIQHLKNKFGRDYLLEIK----------MKEPTQVEALHTEILKLFPQAAW----QERYSSLMAYKLPVEDVHPLSRAFFKLEAMKQTFNLEEYSLSQATLEQVFLELCKEQEL 1522          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA3_DICDI (ABC transporter A family member 3 OS=Dictyostelium discoideum GN=abcA3 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 6.438e-26
Identity = 68/197 (34.52%), Postives = 117/197 (59.39%), Query Frame = 1
Query:    4 RAGSYSGGMKRRLSVAIALIG-DPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQ 591
            +AG+ SGG KR+L + IA IG +  ++ LDE ++G+DP++R  V D I   KKG+ IIL+TH M+EAD+L D I+I+A G+L+C G+ + LK++FG G+++T+         +  N D  +   +    K   + H+      +    L+  +P +   +  ++F  L+D + +L I    +S++TLE+VFL I ++
Sbjct:  632 KAGTLSGGQKRKLCLGIAFIGPNSNILFLDEVSSGLDPLSRSEVQDFIISKKKGKTIILSTHYMDEADLLGDTISIIAHGKLKCNGSPLFLKNRFGVGYLLTI-----TKKSTEFNKDSVMEITN----KYIKQAHI----LSDAGTELSIRLPMESLPMFSQYFKHLEDCKNQLLIDSYGISISTLEEVFLKIGQE 815          

HSP 2 Score: 106.301 bits (264), Expect = 3.307e-22
Identity = 64/195 (32.82%), Postives = 102/195 (52.31%), Query Frame = 1
Query:   16 YSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNF------TGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNI 582
            YSGG KR++++++A++G+P +  LDE + G+DP+  R +W++I + KK + IILTTHSM E   + DR+ IM  G++ C+G+   +K KFG+G+ + V F      +G N  Q  L     V   HHD    F       LP              D    L K F  ++   K + + D  V  T+++ +FL +
Sbjct: 1429 YSGGNKRKVALSVAIVGNPSVCFLDEVSAGVDPVVARFMWNVITELKKDKVIILTTHSMLECSAVCDRLTIMKSGKMMCLGSIQHIKDKFGSGYSIDVKFKKEYLLSGINLFQKELPNAKLV--DHHDLSASF------ELPNS-----------LDSPIQLSKIFSIIERNLKPI-LNDYSVGQTSIDHIFLKL 1603          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCAA_DICDI (ABC transporter A family member 10 OS=Dictyostelium discoideum GN=abcA10 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 8.409e-26
Identity = 69/246 (28.05%), Postives = 125/246 (50.81%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTV--------------------------------------------NFTGSNNGQSPLNGDHEVASPHHDAVKQF---FETHLDVLPKEENKAF--------LTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQ 591
            SGGMKRRL +AI+LIG+P +++LDEP++G+D +++  + +++Q  K  + IILTTH+++ A++L D+I IM  G+++ +G+S+ LK++F  G+I+T+                                             F  +NN  +  N D   +S    + K      + + +     E + F        L Y + H    ++ +F  EL+ R+ E  I  I +S+TTL++VFL ++++
Sbjct:  631 SGGMKRRLCLAISLIGNPSILLLDEPSSGLDSLSQHMICELLQRKKPNKTIILTTHNLDSAELLGDKICIMTSGKVKAMGSSLELKNQFNLGYILTIVYDKSLSLLQPPNINQQFESFFFNKFNDSTQSKQNLKNIQSFYNIFNNNNNENNSNNSDGSSSSSDSSSSKDVLLNIKNNNNNNNNNEERGFSSGQRDLELEYSLTHQSTDVITEFLEELESRQDEFKIKRISMSMTTLDEVFLKVSEE 876          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABC8B_MOUSE (ATP-binding cassette sub-family A member 8-B OS=Mus musculus GN=Abca8b PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 4.173e-25
Identity = 65/202 (32.18%), Postives = 112/202 (55.45%), Query Frame = 1
Query:    1 VRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLP-KEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603
            + A + SGG KR+L+  IA++GD ++ +LDEPT G+DP +R  VW+++++ +  R ++ +T  M+EADIL+DR   ++ GRL+C G+S+ LK K+G G+ +++                EV  P +  +    + H+       E +  L Y +P +      +    L D    LGI +  VS+TTL +VFL +  +A ++
Sbjct:  611 ILAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKERRADRVVLFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGVGYHLSLQL-------------KEVCVPEN--ITSLVKQHIPAAKLSAEGEGKLLYTLPLETTYRFPELCQSL-DSCPGLGIENYGVSMTTLNEVFLKLEGKASID 796          

HSP 2 Score: 113.235 bits (282), Expect = 2.705e-24
Identity = 66/197 (33.50%), Postives = 111/197 (56.35%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELE 603
            S G+KR+L   ++++G+P +++LDEP+TG+DP  ++ +W  I+   K   R  +LTTH M EA+ L DR+AI+  GRLRCIG+   LKSKFG  +++ +        + PLN   E+      A +Q           E   + + Y +P +    L + F +L+  ++   + +  +S +TLE VFL ++K+ EL+
Sbjct: 1417 SEGVKRKLCFVLSILGNPSILLLDEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLEQVE-PLN--TEILRLFPQASRQ-----------ERYSSLMAYKLPVEAVQPLSQAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQELD 1599          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA8_HUMAN (ATP-binding cassette sub-family A member 8 OS=Homo sapiens GN=ABCA8 PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.586e-24
Identity = 66/196 (33.67%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   19 SGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKG--RAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAEL 600
            S G+KR+L   ++++G+P +V+LDEP+TGMDP  ++ +W  I+   +   R  +LTTH M EA+ + DR+AIM  GRLRCIG+   LKSKFG  +++ +     N  Q           P H  + + F        +E   + + Y +P +    L + F +L+  ++   + +  +S +TLE VFL ++K+ EL
Sbjct: 1379 SEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKV--KNLAQ---------VEPLHAEILRLFP---QAARQERYSSLMVYKLPVEDVQPLAQAFFKLEKVKQSFDLEEYSLSQSTLEQVFLELSKEQEL 1560          

HSP 2 Score: 98.9821 bits (245), Expect = 5.279e-20
Identity = 56/172 (32.56%), Postives = 99/172 (57.56%), Query Frame = 1
Query:   67 DPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLPKEENKAFLTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNI 582
            D ++ +LDEPT G+DP +R  VW+++++ K  R I+ +T  M+EADIL+DR   +++G+L+C G+S+ LK K+G G+ +++         + +  +  + S     VKQ      D     +++  L Y +P +R     + + +L D   +LGI +  VS+TTL +VFL +
Sbjct:  594 DKEIFLLDEPTAGLDPFSRHQVWNLLKERKTDRVILFSTQFMDEADILADRKVFLSQGKLKCAGSSLFLKKKWGIGYHLSLQL-------NEICVEENITS----LVKQHIP---DAKLSAKSEGKLIYTLPLERTNKFPELYKDL-DSYPDLGIENYGVSMTTLNEVFLKL 750          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: CED7_CAEEL (ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6)

HSP 1 Score: 113.62 bits (283), Expect = 2.071e-24
Identity = 76/236 (32.20%), Postives = 121/236 (51.27%), Query Frame = 1
Query:    4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTV--NFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLD----VLPKEENKAFLTYVIPHD-------REAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIAKQAELETAAAEGRLVTLNLTSGASVEIPP 672
            +A + SGGMKR+L V +ALIGD ++V+LDEPT GMDP  R+ V  +++  K  R I+LTTH M+EA+ L D + IM+ G+L   GT+  LK KFGTG+++TV  +  G     + +  D      H+    +  E H      +LP+   K F+      +       R  +       L+ +   L +    +SL TLE VF+ I  + +   A+ +   ++ N  + +   + P
Sbjct:  675 KAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTD---VCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGDKVDKAIASRQNSRISHNSRNASEPSLKP 907          

HSP 2 Score: 112.079 bits (279), Expect = 6.026e-24
Identity = 67/196 (34.18%), Postives = 108/196 (55.10%), Query Frame = 1
Query:   16 YSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKK--GRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLD---VLPKEENKAF-LTYVIPHDREAILKKFFVELQDREKELGIADIQVSLTTLEDVFLNIA 585
            YSGG KR++SV +AL+   +++ILDEPT G+DP  RR VW+++   ++    A++LT+HSM+E + L  RIA++ +G L  IG+S  LKS +G  + +T++    N                 D V Q  +T L    +     NK   L + IP ++E      F  +Q   K+LG+ D  ++ ++LE+ FL +A
Sbjct: 1503 YSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPN---------------QRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKDFILAQSSLEETFLRLA 1683          
BLAST of DY257739 vs. ExPASy Swiss-Prot
Match: ABCA8_DICDI (ABC transporter A family member 8 OS=Dictyostelium discoideum GN=abcA8 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.533e-24
Identity = 63/208 (30.29%), Postives = 116/208 (55.77%), Query Frame = 1
Query:    4 RAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIQDAKKGRAIILTTHSMEEADILSDRIAIMAKGRLRCIGTSIRLKSKFGTGFIVTVNFTGSNNGQSPLNGDHEVASPHHDAVKQFFETHLDVLP----KEENKAFLTYVIPHDRE-AILKKFFVELQDREKELG---IADIQVSLTTLEDVFLNIAKQAELE 603
            +  ++SGGMKRRLSVAI  IGDPK++ +DEPTTG+DP ++R ++ ++++ KK + IILT+H M E +IL+  + I+  G + C G +++LK+K+G G+ V                  +V +   + + +        LP     +++   L +  P + +  I+  FF  L+   K+     + D  +S + ++DVF+ ++ + +L+
Sbjct:  648 QCSTFSGGMKRRLSVAIGCIGDPKIIFMDEPTTGLDPRSKRRIYTLVKEIKKDKVIILTSHDMHEIEILAQNLVILNDGIMVCNGNALQLKTKYGEGYSV------------------QVIAKSLEVIPEIINFVTSSLPYCRFLKQSALQLNFGFPINTDPKIIVNFFKRLESITKDENNNLMRDWSISHSNMDDVFIKVSNKPKLQ 837          
The following BLAST results are available for this feature:
BLAST of DY257739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
ABCA9_HUMAN8.984e-2831.68ATP-binding cassette sub-family A member 9 OS=Homo... [more]
ABCAD_MOUSE7.605e-2738.22ATP-binding cassette sub-family A member 13 OS=Mus... [more]
ABCA6_MOUSE9.933e-2733.33ATP-binding cassette sub-family A member 6 OS=Mus ... [more]
ABCAA_HUMAN2.213e-2632.00ATP-binding cassette sub-family A member 10 OS=Hom... [more]
ABCA3_DICDI6.438e-2634.52ABC transporter A family member 3 OS=Dictyostelium... [more]
ABCAA_DICDI8.409e-2628.05ABC transporter A family member 10 OS=Dictyosteliu... [more]
ABC8B_MOUSE4.173e-2532.18ATP-binding cassette sub-family A member 8-B OS=Mu... [more]
ABCA8_HUMAN1.586e-2433.67ATP-binding cassette sub-family A member 8 OS=Homo... [more]
CED7_CAEEL2.071e-2432.20ABC transporter ced-7 OS=Caenorhabditis elegans GN... [more]
ABCA8_DICDI3.533e-2430.29ABC transporter A family member 8 OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1AG09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257739 ID=DY257739; Name=DY257739; organism=Citrus clementina; type=EST; length=1096bp
GTGAGAGCTGGGAGCTACAGTGGAGGAATGAAGCGTCGCCTTAGTGTTGC
CATAGCTCTTATTGGTGATCCAAAGTTGGTCATTCTGGATGAACCGACTA
CTGGAATGGATCCCATTACGAGGAGGCATGTTTGGGATATAATACAAGAT
GCAAAGAAAGGTCGTGCCATTATCCTGACGACACACTCAATGGAAGAAGC
TGACATTCTTAGTGACCGCATAGCTATAATGGCAAAGGGCAGACTCCGCT
GTATTGGAACCTCAATCAGATTAAAGTCAAAGTTTGGTACTGGTTTCATT
GTTACTGTTAATTTCACCGGAAGCAATAATGGACAAAGTCCTCTTAATGG
AGATCATGAAGTTGCAAGTCCTCATCATGATGCAGTGAAGCAGTTCTTTG
AAACTCATTTAGATGTGTTACCAAAAGAGGAGAATAAAGCATTCCTGACA
TATGTCATTCCCCATGATAGAGAGGCGATTTTGAAAAAATTTTTTGTGGA
GCTCCAAGATAGAGAAAAAGAATTGGGTATAGCAGATATTCAAGTAAGTC
TCACAACACTAGAAGATGTTTTCTTGAATATAGCAAAACAGGCAGAGCTA
GAAACTGCTGCTGCTGAAGGAAGGTTGGTCACTCTAAACTTGACATCCGG
GGCATCAGTTGAGATACCTCCAGGAGCAAGGTTTGTGGGGATTCCTGGAA
TGGAATCTGCAGAGAATCCTAGAGGCATTATGGTTGAAGTATACTGGGAG
CAAGATGATACTGGTGCTCTCTGCATTTCCGGCCACTCTCCTGAAAAACC
AATACCCCCTCATGTCGAACTAGATGCTTCTTCAGCTTCGACTTCCCGTG
GAAATTTGTTCGGCCAGACAGGACCAGTTCATGGAAATGTCATCGATCCC
AATCAAATTGGTGACTAACACCCTTTAATAGCTTTTCACGTATTACAATA
TTTTACTGGAATACCAAGTTGTTTTAAGGATTTTGGTAATTTAAAGGATG
TTTTTGTATATCAATGTGAAAATTTTAATTTCTTTTTTCCGTAATGCCAC
CAAAAAAAACAGGGAAAAATTCCCTTTCACATTTTTTTCTTTTAAT
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