DY257752

Overview
NameDY257752
Unique NameDY257752
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1209
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257752 vs. ExPASy Swiss-Prot
Match: URIC_DROSU (Uricase (Fragment) OS=Drosophila subobscura GN=Uro PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.087e-27
Identity = 91/257 (35.41%), Postives = 128/257 (49.81%), Query Frame = 3
Query:  138 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECV-------------------SVDGQ-LHEHGFKLG-SERHTTEVTVQESGTLQ-MTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVL 842
            +GK  V+V  V R K   H + E+ V   L   S   Y   +NSDIVATD+ KNTVY  AK+   + S E+FA+LL +HF + Y  V  A V +   PW+ V                   S+D + LH H F    +  H  +V +      Q + +GI+GL +LKTT+S F  F+ D+  +LPD  +R+ +T V  +W YS     N       F+  +  VK +++  F G P+ GV S SV  TLY   K VL
Sbjct:   31 YGKDAVKVLHVSR-KGPVHTIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKYGIE-SPEKFALLLGQHFLNKYSHVEEAHVHVETYPWQRVCQEETKASTTVGQGSCNFSSIDNRSLHNHAFIFTPTALHYCDVVIXRQDPKQTVITGIKGLRVLKTTQSSFVNFVNDEXRSLPDQYDRIFSTVVDCSWEYSDTDTVN-------FSRAWQQVKNIILRNFAGDPQVGVSSPSVQHTLYLSEKQVL 278          
BLAST of DY257752 vs. ExPASy Swiss-Prot
Match: URIC_DROME (Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.933e-26
Identity = 90/262 (34.35%), Postives = 132/262 (50.38%), Query Frame = 3
Query:  138 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECV------------------------SVDGQ-LHEHGFKLG-SERHTTEVTVQESGTLQ-MTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVL 842
            +GK  V+V  V R+    H + E+ V   L   S   Y   +NSDIVATD+ KNTVY  AK+   + S E+FA+LLA+HF + Y  V  A V +   PW+ V                        S+D + LH H F    +  H  +V ++ +   Q + +GI+GL +LKTT+S F  F+ D++ +LPD  +R+ +T V  +W YS         + L F   +  VK +++  F G P+ GV S SV  TLY   + VL
Sbjct:   39 YGKDAVKVLHVSRNGPV-HAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKHGIE-SPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGKCENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITGIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYS-------DTENLDFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVL 291          
BLAST of DY257752 vs. ExPASy Swiss-Prot
Match: URIC_DROVI (Uricase OS=Drosophila virilis GN=Uro PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.218e-25
Identity = 86/258 (33.33%), Postives = 122/258 (47.29%), Query Frame = 3
Query:  138 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDG---------------------QLHEHGFKLGSERHT--TEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVL 842
            +GK  V+V  + R K   H + E  V   L   S   Y+  +NSD+VATD+ KNTVY  AK+   + S E+FA++LAKHF S Y  V    V +   PW+ ++ D                      QLH H F      H     +  ++     + SGI+GL +LKTT+S F  F+ D++  L D  +R+ +T V  +W YS     N       F   +  VK +++  F G P  G+ S SV  TLY   K VL
Sbjct:   33 YGKDAVKVMHINR-KGPVHSIQELEVGTHLKLYSNKDYMLGNNSDVVATDSQKNTVYLLAKKHGIE-SPEKFALILAKHFLSTYAHVEEVHVHVEAYPWQRMTQDVSDNIGKGYCENNCNSRSNGNCQLHNHAFIFTPTAHDYCDVILTRQDPKQTVISGIKGLRVLKTTQSSFVNFVDDEFRTLADQYDRIFSTVVECSWEYSDTESVN-------FLHAWETVKDIVVRNFAGDPSVGIPSPSVQHTLYLSEKQVL 281          
BLAST of DY257752 vs. ExPASy Swiss-Prot
Match: URIC_PICJA (Uricase OS=Pichia jadinii PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 6.875e-24
Identity = 77/243 (31.69%), Postives = 129/243 (53.09%), Query Frame = 3
Query:  138 HGKARVRVARVWRSKEG--RHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYE---SVFNLPQ--KPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVL 842
            +GK  V+  +V +  +   +  ++E  V+  L      +Y + DNS IV TDT+KNT+   AK   E   +E FA  LA HF   Y  V+   V+IV+  W   +VDG+ H+H F   G E+  T++  + SG  +++S I+ L +LK+T S F G+ +  +T L  T +R+L+T+V +TW +  +   SV+++ +      F   Y   +++ + TF         S SV +T++ MA  +L
Sbjct:   10 YGKDNVKFLKVKKDPQNPKKQEVMEATVTCLLEGGFDTSYTEADNSSIVPTDTVKNTILVLAKTT-EIWPIERFAAKLATHFVEKYSHVSGVSVKIVQDRWVKYAVDGKPHDHSFIHEGGEKRITDLYYKRSGDYKLSSAIKDLTVLKSTGSMFYGYNKCDFTTLQPTTDRILSTDVDATWVWDNKKIGSVYDIAKAADKGIFDNVYNQAREITLTTF-----ALENSPSVQATMFNMATQIL 246          
BLAST of DY257752 vs. ExPASy Swiss-Prot
Match: URIC_SCHPO (Probable uricase OS=Schizosaccharomyces pombe GN=SPCC1223.09 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.772e-22
Identity = 75/241 (31.12%), Postives = 117/241 (48.55%), Query Frame = 3
Query:  129 QQRHGKARVR-VARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEE-FAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVL 842
            Q  +GK  VR + +    K   H + E +V   L  +   +Y   DNS +V TDT KNT+Y  AK     +SV E FA  LAKHF   Y+ +  A + I   PW  + V G+ H H F +   E   T V   E     + S ++ + +LK+T SGF  F + ++T LP+  +R+ +T +   + + +   F        F   Y  VK++ ++TF     E     SV +T+Y+MA  ++
Sbjct:    9 QCAYGKTLVRFMKKDICPKTKTHTVYEMDVQSLLTGELEESYTKADNSIVVPTDTQKNTIYVFAKN--NDVSVPEVFAAKLAKHFVDKYKHIHGAALDITITPWTRMEVQGKPHSHSFIRNPGETRKTHVVFSEGKGFDVVSSLKDVLVLKSTGSGFTNFHKCEFTTLPEVTDRIFSTSIDCNYTFKHFDTFE-ELAGFDFNSIYEKVKEITLETFALDDSE-----SVQATMYKMADTII 241          
The following BLAST results are available for this feature:
BLAST of DY257752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
URIC_DROSU5.087e-2735.41Uricase (Fragment) OS=Drosophila subobscura GN=Uro... [more]
URIC_DROME1.933e-2634.35Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=... [more]
URIC_DROVI6.218e-2533.33Uricase OS=Drosophila virilis GN=Uro PE=2 SV=1[more]
URIC_PICJA6.875e-2431.69Uricase OS=Pichia jadinii PE=3 SV=1[more]
URIC_SCHPO3.772e-2231.12Probable uricase OS=Schizosaccharomyces pombe GN=S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BA12ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257752 ID=DY257752; Name=DY257752; organism=Citrus clementina; type=EST; length=1209bp
TTTTTTTTCTGGGAGCGCGCCCTTGTTGTTTGGACCCGAGGAATTCGCGC
TATTACGGCGCGGGGAAAAAGAAAAAGAAAGAAAATTAATAACCAAAAAT
GGCGAAAAAAATAGAGGGATTCAATTTCCAGCAGCGACACGGGAAAGCTC
GAGTGAGAGTTGCAAGAGTTTGGCGAAGCAAAGAAGGCCGCCATTTTATG
GTCGAATGGAACGTCAGCATCAGCTTGCTCTCCGATTCCATCATCGCCTA
CGTTGACGACGATAACTCCGATATCGTCGCCACCGATACCATAAAAAATA
CTGTTTACGCTAAAGCTAAGGAATGTAAAGAGCAACTTTCAGTCGAGGAA
TTTGCTATTTTACTCGCCAAGCACTTTACGTCCTTTTATCGCCAGGTTAC
TAGTGCCATAGTGAGGATAGTGGAAAAGCCATGGGAATGTGTATCCGTGG
ATGGGCAACTGCATGAGCATGGTTTCAAACTTGGATCCGAGAGGCACACA
ACAGAGGTTACAGTACAGGAGTCTGGTACTTTGCAGATGACTTCTGGCAT
TGAAGGACTGGCTTTGCTGAAGACAACCAAGTCAGGTTTTGAAGGGTTTA
TTAGGGACAAATACACGGCTCTGCCTGATACTCAAGAAAGGATGCTGGCA
ACAGAGGTCACTAGTACGTGGAGGTATTCTTATGAATCTGTCTTTAACCT
CCCACAGAAACCGCTTTACTTCACAGAGAGATACCTGGCTGTGAAAAAAG
TTCTGATGGATACTTTCTTTGGTCCTCCGAAAGAGGGAGTATACAGTGCG
TCTGTCCCAAGCACTCTTTACCAAATGGCAAAGGCCGTCCTTTGGCAGGT
TTCATGACATATCCTTGGGTCATCCAAAAATGCCCAATATCCATTTCTAA
ACCGTTAATTATCAAGCAAGGACAAGGACATTATTGTGAAATTTTGAAAA
AGAATGTGTATTACCAACCAACGAACCCTCAGGGATCAATCGAAGCAAGC
TTCCGCCGGGTCCGGTCAAAAAATGTAAAAGTGTTGCATAAGGTGGAAGT
GGACCCCTAGGTGGTTTCATCATTCCCAAAAAAAAAATGGCCACTGGGTT
GGTTCTGGGTTGTTAATATAAAAGTTTTATGTGGGGGGAATTTTGGGGTG
GAACCTTTAAGCCATCCCACACTGGCCAACATTAAAAAAATCCTTTTTTT
GGGCTGGGG
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