DY257772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_RHORT (30S ribosomal protein S11 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 62 VAMSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 +A +K R + +N+T G +AH+ ASFN+T I +TD+ G G K R +S+PYAA +AA+D ++ +E G+ L + ++ +SALRAL G ++ I+DVTPIP Sbjct: 1 MAKPAQKLRRRERKNITSG-----------IAHVSASFNNTKITITDVQGNAIAWSSAGAQGFKGSR-KSTPYAAQVAAEDAGRKAQEHGMKTLEVMVKG--------PGSGRESALRALQSVGFQVTSIKDVTPIP 117
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_RALEJ (30S ribosomal protein S11 OS=Ralstonia eutropha (strain JMP134) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ + ++ GI L ++++ +SA+RAL G+KI IEDVTPIP Sbjct: 22 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAIIEDVTPIP 120
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_RALEH (30S ribosomal protein S11 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ + ++ GI L ++++ +SA+RAL G+KI IEDVTPIP Sbjct: 22 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAIIEDVTPIP 120
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PHEZH (30S ribosomal protein S11 OS=Phenylobacterium zucineum (strain HLK1) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAH+ ASFN+T + +TD G G M K R +S+PYAA +AA+D ++ E G+ L + + +SALRAL GM I I DVTPIP Sbjct: 19 GVAHVNASFNNTMVTITDAQGNTISWSSAGLMGFKGSR-KSTPYAAQMAAEDAGRKAAEHGVRTLEVNVSG--------PGSGRESALRALQAVGMTITTIRDVTPIP 117
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PARDP (30S ribosomal protein S11 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 2 Query: 68 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPI 469 M+R KTR ++E + GVAH+ +SFN+T I ++D+ G G M K R +S+PYAA +AA+D ++ +E G+ L ++++ +SALRALA G I I DVTPI Sbjct: 1 MARDKTRIKRKERKNIAT---------GVAHVNSSFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQMAAEDAGKKAQEHGVRTLEVEVQG--------PGSGRESALRALAAVGFNITAIRDVTPI 116
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_LEPCP (30S ribosomal protein S11 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 GVAH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ + +E GI L +K++ +S++RALA G++I I DVTP+P Sbjct: 24 GVAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVAAEVAGRAAQEQGIKNLDVKIKG--------PGPGRESSVRALASLGIRIASISDVTPVP 122
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_DINSH (30S ribosomal protein S11 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 47/134 (35.07%), Postives = 69/134 (51.49%), Query Frame = 2 Query: 68 MSRRKTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPI 469 M+R K R K+E + GVAH+ +SFN+T I ++D+ G G M K R +S+PYAA +AA+D ++ +E G+ L ++++ +SALRALA G I I DVTPI Sbjct: 1 MARDKQRTKKKERKNIAA---------GVAHVNSSFNNTKILISDVQGNAIAWSSAGTMGFKGSR-KSTPYAAQMAAEDAGKKAQEHGVKTLEVQVQG--------PGSGRESALRALAAVGFNITAIRDVTPI 116
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_CUPTR (30S ribosomal protein S11 OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ + ++ GI L ++++ +SA+RAL G+KI IEDVTPIP Sbjct: 22 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAIIEDVTPIP 120
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_RALPJ (30S ribosomal protein S11 OS=Ralstonia pickettii (strain 12J) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 G+AH+ ASFN+T I +TD G +GG K R +S+P+AA +AA+ + ++ GI L ++++ +SA+RAL G+KI IEDVTP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSR-KSTPFAAQVAAESAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNNLGIKIQLIEDVTPVP 121
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_RALME (30S ribosomal protein S11 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsK PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 149 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIP 472 G+AH+ ASFN+T I +TD G GG K R +S+P+AA +AA++ + ++ GI L ++++ +SA+RAL G+KI IEDVTP+P Sbjct: 23 GIAHVHASFNNTIITITDRQGNALSWATAGGQGFKGSR-KSTPFAAQVAAENAGRVAQDQGIKNLEVRIKG--------PGPGRESAVRALNALGIKIAVIEDVTPVP 121 The following BLAST results are available for this feature:
BLAST of DY257772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257772 ID=DY257772; Name=DY257772; organism=Citrus clementina; type=EST; length=740bpback to top |