DY257772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_THESM (30S ribosomal protein S11P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps11p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31 Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +GVAHI+AS+N+T IH+TDL+G ET+ + +GGM VKADRDESSPYAAM+AA+ ++ E GI +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 16 WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESSPYAAMIAARRAAEEAMEKGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 128
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PYRKO (30S ribosomal protein S11P OS=Pyrococcus kodakaraensis GN=rps11p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.051e-30 Identity = 64/113 (56.64%), Postives = 86/113 (76.11%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E GIT +HIK+RA AQ+A+RAL+R+G++IGR+EDVTPIP D T Sbjct: 17 WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHDGT 129
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PYRFU (30S ribosomal protein S11P OS=Pyrococcus furiosus GN=rps11p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +G+AHI++SFN+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_METMJ (30S ribosomal protein S11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps11p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 67/115 (58.26%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 137 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 481 E +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A V+Q ++ GIT +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 3 EEKWGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQNARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 117
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PYRHO (30S ribosomal protein S11P OS=Pyrococcus horikoshii GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30 Identity = 63/113 (55.75%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_PYRAB (30S ribosomal protein S11P OS=Pyrococcus abyssi GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30 Identity = 63/113 (55.75%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D T Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGT 126
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_METKA (30S ribosomal protein S11P OS=Methanopyrus kandleri GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +G+AHI+ASFN+T I +TDL+G ET R +GGM V ADR+ESSPYAAM AA+ ++ E GITA+H+K+RA AQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 14 WGIAHIYASFNNTIITITDLTGAETFARWSGGMVVDADREESSPYAAMKAARRAAEEAMEKGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 126
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.217e-30 Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 131 DGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 481 +G+ +GVAHI+ASFN+T I VTDL+G ET+ + +GGM VK DR+ESSPYAAM A +V+Q +E GI LH+K+RA AQ+A+RALAR+GM+IG IEDVTP+P DS Sbjct: 3 EGKEKWGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDS 119
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_IGNH4 (30S ribosomal protein S11P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps11p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.217e-30 Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 481 +GVAHIF+S N+TF+H+TD++G ET R+TGGM VKAD ++ SPYAAM+AA +Q+ E GITA+HIK+RA AQ+A+RALARSG IGRIEDVTP+P D+ Sbjct: 7 WGVAHIFSSPNNTFVHITDITGSETASRVTGGMVVKADHEKPSPYAAMIAAARAAQQAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHDT 118
BLAST of DY257772 vs. ExPASy Swiss-Prot
Match: RS11_HYPBU (30S ribosomal protein S11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps11p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.217e-30 Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 146 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 484 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAMLAA +Q+ + GI ALHIK+RA AQ+A+RALAR+G IGRIEDVTP+P D+T Sbjct: 10 WGVAHIYSSYNNTIIHITDLTGAETVARTSGGMVVKADREKPSPYAAMLAASRAAQQAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHDTT 122 The following BLAST results are available for this feature:
BLAST of DY257772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257772 ID=DY257772; Name=DY257772; organism=Citrus clementina; type=EST; length=740bpback to top |